BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023890
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    67   4e-09
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    63   5e-08
ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatul...    62   1e-07
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
 Frame = -1

Query: 604 SIPSSFCFATLKVLRLQYITISFDRSLQKVSLSFPTMEEFIIKGCTWLGIKNIDISAPKL 425
           S+P   CF +LK+L   ++T + ++S Q++    P +++   + C W+ I NI ++ P L
Sbjct: 163 SVPDGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNI-NISVAIPTL 221

Query: 424 QMLTIDDGWTSRSFRDCEIKVSAESLMSLHFRSRLCYKYSLHDLSSLVDAFIHLTCYNGT 245
           + L I    +S     C  K+ A +L+SL ++S       L + +S+VDA I L      
Sbjct: 222 KKLDIFFRSSSLDRNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDL------ 275

Query: 244 VKRLGPLLRGIFHLKN--LHLAVASIRTLS 161
                    G F ++N  LH+AV +I   S
Sbjct: 276 ---------GFFCVQNNELHVAVFAIELFS 296


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 65/233 (27%), Positives = 97/233 (41%), Gaps = 7/233 (3%)
 Frame = -1

Query: 685 CLFTSESLKVLEIGSERFSKTETVVSISIPSSFCFATLKVLRLQYITISFDRSLQKVSLS 506
           CLF  E+L  LEI      K        +PSS   + LK+L L  +  + D S Q++  S
Sbjct: 144 CLFNCETLTELEINMPYILK--------LPSSISLSCLKILNLYEVIFTDDHSTQQL-FS 194

Query: 505 FPTMEEFIIKGCTWLGIKNIDISAPKLQMLTIDDGWTS--RSFRDCEIKVSAESLMSLHF 332
            P + E  I  C W+ +  + ISAPKLQ L I +   S   S   C +++    L     
Sbjct: 195 LPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADFTI 254

Query: 331 RSRLCYKYSLHDLSSLVDAFIHLTCY----NGTVKRLGPLLRGIFHLKNLHLAVASIRTL 164
              L   Y L++ SS+V+  I +         T  R   LL GI   ++L L    +  L
Sbjct: 255 IGTLSNDYCLYE-SSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVDVL 313

Query: 163 SH-PNVSAHMRSLSFLTHLSVLMYGYGIGSTGASGRQFVDLLCNMPNIESIYF 8
              P + A       LT L        + S G     F  ++ N P++ ++ F
Sbjct: 314 DDAPELLAFPLEFRNLTSLLFESEESNLHSDG-----FWHIIYNSPHLIALQF 361


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
           F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
 Frame = -1

Query: 670 ESLKVLEIGSERFSKTETVVSISIPSSFCFATLKVLRLQYITISFDRSLQKVSLSFPTME 491
           ESL  L +G +         ++ IPS  CF  LK L +  +T + + S Q++    P ++
Sbjct: 314 ESLNELRLGLQ--------FTLHIPSGICFPILKTLVVTNVTFANENSAQQLFSGCPVLQ 365

Query: 490 EFIIKGCTWLGIKNIDISAPKLQMLTIDDGWTSRSF-RDCEIKVSAESLMSLHFRSRLCY 314
           E  +  C W  I  I +S   L+ LTI        +    ++K+ A +L+SL+       
Sbjct: 366 ELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLKIDAVNLLSLYCICNPII 425

Query: 313 KYSLHDLSSLVDAFIHLTCYNGTVKRLG-----PLLRGIFHLKNLHLAVASIRTLSHPNV 149
           +    +L+SLVDAFI L       +         LL+G+  +K+L L    + +  H   
Sbjct: 426 EVIPVNLTSLVDAFIFLGYVYPHDEPYAAQCSIELLKGLGSVKSLKLNDIILMSFYHTLD 485

Query: 148 SAHMRSLSF-----LTHLSVLMYGYGIGSTGASGRQFVDLLCNMPNIESIYFP 5
           + H+  L       LTHL V        S G +    +D+L   P +E +  P
Sbjct: 486 NLHLHLLPLPTFYNLTHLYVCSV-----SPGNACALVMDILRKTPKLEDLTIP 533


>ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485675|gb|AES66878.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 436

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 48/186 (25%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
 Frame = -1

Query: 688 LCLFTSESLKVLEIGSERFSKTETVVSI-------SIPSSFCFATLKVLRLQYITISFDR 530
           LC++  + L++  +  +   K +++  +       ++PS  C ++L +L+L  ITI+ D 
Sbjct: 134 LCIYLKKGLEIQLVSFDALFKCQSLEELVLNGCAFTLPSFVCLSSLTILKLSRITITCDS 193

Query: 529 SLQK--VSLSFPTMEEFIIKGCTWLGIKNIDISAPKLQMLTID-DGWTSRSFRDCEIKVS 359
           S +   ++L+FP + ++    CT+L +K++ +  P L++++I  D +  +S   CEIK  
Sbjct: 194 SNESKTLALNFPALRKYETLDCTFLNVKSVTLQVPLLEVVSISYDPFYHKS--HCEIKFY 251

Query: 358 AESLMSLHFRSRLCYKYSLHD---LSSLVDAFIHLTCYNGTVKRLGPLLRGIFHLKNLHL 188
           A  L      ++ CY   + D   L +   AF  +  Y+   K L  +  GIF  K L +
Sbjct: 252 ATRL------AKFCYSGYMSDTILLEAHSVAFADIALYDDNEKSLQEI--GIFVCKLLSI 303

Query: 187 AVASIR 170
              S++
Sbjct: 304 NPESLK 309


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
 Frame = -1

Query: 688 LCLFTSESLKVLEIGSERFSKTETVVSISIPSSFCFATLKVLRLQYITISFDRSLQKVSL 509
           LCLFT  +L  L+I S    +  +  SIS+P       LK+L LQ++    + S Q++ L
Sbjct: 157 LCLFTCATLTKLKITSHGVLRLSS--SISLPC------LKILSLQHVVFPDEDSTQQI-L 207

Query: 508 SFPTMEEFIIKGCTWLGIKNIDISAPKLQMLTIDDGWTS--RSFRDCEIKVSAESLMSLH 335
           +  T+E+  I    W  +K I ISAPKL+ L I +   +  R    C + +   +L    
Sbjct: 208 NLRTLEKLKISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALTFFS 267

Query: 334 FRSRLCYKYSLHDLSSLVDAFIHL-TCY 254
           F       Y L   SSLV+A+ H+  CY
Sbjct: 268 FSGGFWDDYCLFKSSSLVEAYFHVYGCY 295