BLASTX nr result

ID: Coptis25_contig00023885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023885
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525845.1| conserved hypothetical protein [Ricinus comm...    86   2e-14
ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...    83   1e-13
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...    83   1e-13
ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...    81   4e-13

>ref|XP_002525845.1| conserved hypothetical protein [Ricinus communis]
           gi|223534850|gb|EEF36539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 44/109 (40%), Positives = 69/109 (63%)
 Frame = -3

Query: 335 WEELIKEVCTRFEVVGQENYVGNFNKLVQTTTVEDYYEQFEELKSLMVSKNKHLSDEYFV 156
           WE   KE+C RF  V   + V   N++ Q  +V +Y E+FEEL+SLM+  N    + YF+
Sbjct: 122 WEVFAKELCRRFGKVIVSDIVEESNRIQQVGSVINYQERFEELRSLMLKYNPMPDESYFM 181

Query: 155 LSFLSGLKEELRASVQMFRPTSLSQALYLSRMQENALDAQFKRPKPVKK 9
            SF+SGL EE+R+ V++ +  +LSQA   +++ E +++A FKR K + K
Sbjct: 182 SSFVSGLNEEIRSMVKLLKLATLSQAYERAKLYEKSIEAMFKRHKFLPK 230


>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 41/111 (36%), Positives = 71/111 (63%)
 Frame = -3

Query: 341 IGWEELIKEVCTRFEVVGQENYVGNFNKLVQTTTVEDYYEQFEELKSLMVSKNKHLSDEY 162
           I WEE  +++C RF    +++ V  FNKL+Q   ++DY E+FEEL+SLM   N  L + Y
Sbjct: 76  IEWEEFSQDLCRRFG--SKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAY 133

Query: 161 FVLSFLSGLKEELRASVQMFRPTSLSQALYLSRMQENALDAQFKRPKPVKK 9
           +V SF+SGLK+E++  +++ +P  +  A   ++ QE A +A  K+ + +++
Sbjct: 134 YVSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSLQR 184


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 41/111 (36%), Positives = 71/111 (63%)
 Frame = -3

Query: 341 IGWEELIKEVCTRFEVVGQENYVGNFNKLVQTTTVEDYYEQFEELKSLMVSKNKHLSDEY 162
           I WEE  +++C RF    +++ V  FNKL+Q   ++DY E+FEEL+SLM   N  L + Y
Sbjct: 76  IEWEEFSQDLCRRFG--SKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAY 133

Query: 161 FVLSFLSGLKEELRASVQMFRPTSLSQALYLSRMQENALDAQFKRPKPVKK 9
           +V SF+SGLK+E++  +++ +P  +  A   ++ QE A +A  K+ + +++
Sbjct: 134 YVSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSLQR 184


>ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|222871350|gb|EEF08481.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 41/117 (35%), Positives = 78/117 (66%)
 Frame = -3

Query: 359 QEDKEFIGWEELIKEVCTRFEVVGQENYVGNFNKLVQTTTVEDYYEQFEELKSLMVSKNK 180
           +E++ ++  EE  + +C RF    +E+ V  FNKL+Q  +V+DY ++FEEL+SLM + N 
Sbjct: 181 RENESWMDLEEFAQILCRRFG--SREDSVEEFNKLIQDKSVDDYIKRFEELRSLMSALNS 238

Query: 179 HLSDEYFVLSFLSGLKEELRASVQMFRPTSLSQALYLSRMQENALDAQFKRPKPVKK 9
            L++ Y+V SF++GLKE+++  +++ +P ++  A   +R QE + +A  +R + V++
Sbjct: 239 SLTEFYYVSSFINGLKEDIKPMLKILKPANVLMAFEQARWQEKSNNALTRRSRLVQR 295


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 40/96 (41%), Positives = 63/96 (65%)
 Frame = -3

Query: 335 WEELIKEVCTRFEVVGQENYVGNFNKLVQTTTVEDYYEQFEELKSLMVSKNKHLSDEYFV 156
           WEE  K +C+RF    +++ V  FNKL Q   +E+Y E+FEELKSLM S N  L + Y++
Sbjct: 166 WEEFSKAICSRFG--SRDDIVEEFNKLTQEGGMEEYVERFEELKSLMHSLNPLLPESYYI 223

Query: 155 LSFLSGLKEELRASVQMFRPTSLSQALYLSRMQENA 48
            SF+SGLKE+++  +++ +P +L  A   ++ QE +
Sbjct: 224 SSFISGLKEDIKPMLKILKPGTLMTAFDQAKWQEES 259


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