BLASTX nr result

ID: Coptis25_contig00023875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023875
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21766.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_002266198.1| PREDICTED: mitotic spindle assembly checkpoi...   127   3e-27
ref|XP_003596190.1| Mitotic spindle assembly checkpoint protein ...   118   1e-24
ref|XP_003596189.1| Mitotic spindle assembly checkpoint protein ...   118   1e-24
ref|XP_002332204.1| predicted protein [Populus trichocarpa] gi|2...   113   4e-23

>emb|CBI21766.3| unnamed protein product [Vitis vinifera]
          Length = 183

 Score =  127 bits (319), Expect = 3e-27
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -2

Query: 655 MERRENQTPQVKITKVVVEFLEVAITSIVFLKGVYPSGAFERRRYMNVVVHRARHPQLRD 476
           MERRENQ+PQ +  +++VEFLEVAITSIVFLKG+YPSGAFERRRYMN VV RARHPQLRD
Sbjct: 1   MERRENQSPQNETARILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPQLRD 60

Query: 475 YIHSAVIGLQPFIEK 431
           YIHSAV GL PFI+K
Sbjct: 61  YIHSAVSGLLPFIQK 75


>ref|XP_002266198.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B [Vitis
           vinifera]
          Length = 204

 Score =  127 bits (319), Expect = 3e-27
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -2

Query: 655 MERRENQTPQVKITKVVVEFLEVAITSIVFLKGVYPSGAFERRRYMNVVVHRARHPQLRD 476
           MERRENQ+PQ +  +++VEFLEVAITSIVFLKG+YPSGAFERRRYMN VV RARHPQLRD
Sbjct: 1   MERRENQSPQNETARILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPQLRD 60

Query: 475 YIHSAVIGLQPFIEK 431
           YIHSAV GL PFI+K
Sbjct: 61  YIHSAVSGLLPFIQK 75


>ref|XP_003596190.1| Mitotic spindle assembly checkpoint protein MAD2B [Medicago
           truncatula] gi|355485238|gb|AES66441.1| Mitotic spindle
           assembly checkpoint protein MAD2B [Medicago truncatula]
          Length = 181

 Score =  118 bits (296), Expect = 1e-24
 Identities = 58/75 (77%), Positives = 65/75 (86%)
 Frame = -2

Query: 655 MERRENQTPQVKITKVVVEFLEVAITSIVFLKGVYPSGAFERRRYMNVVVHRARHPQLRD 476
           MERRENQTPQ +I +V+VEFLEVAITS+VFLKG+YP GAFER RYMNVVV RA HPQLR 
Sbjct: 1   MERRENQTPQGQIGRVLVEFLEVAITSVVFLKGIYPQGAFERARYMNVVVQRACHPQLRY 60

Query: 475 YIHSAVIGLQPFIEK 431
           YIH+ V GL PFI+K
Sbjct: 61  YIHATVSGLLPFIQK 75


>ref|XP_003596189.1| Mitotic spindle assembly checkpoint protein MAD2B [Medicago
           truncatula] gi|355485237|gb|AES66440.1| Mitotic spindle
           assembly checkpoint protein MAD2B [Medicago truncatula]
          Length = 204

 Score =  118 bits (296), Expect = 1e-24
 Identities = 58/75 (77%), Positives = 65/75 (86%)
 Frame = -2

Query: 655 MERRENQTPQVKITKVVVEFLEVAITSIVFLKGVYPSGAFERRRYMNVVVHRARHPQLRD 476
           MERRENQTPQ +I +V+VEFLEVAITS+VFLKG+YP GAFER RYMNVVV RA HPQLR 
Sbjct: 1   MERRENQTPQGQIGRVLVEFLEVAITSVVFLKGIYPQGAFERARYMNVVVQRACHPQLRY 60

Query: 475 YIHSAVIGLQPFIEK 431
           YIH+ V GL PFI+K
Sbjct: 61  YIHATVSGLLPFIQK 75


>ref|XP_002332204.1| predicted protein [Populus trichocarpa] gi|222875311|gb|EEF12442.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  113 bits (283), Expect = 4e-23
 Identities = 56/75 (74%), Positives = 65/75 (86%)
 Frame = -2

Query: 655 MERRENQTPQVKITKVVVEFLEVAITSIVFLKGVYPSGAFERRRYMNVVVHRARHPQLRD 476
           M+ + NQ+P    ++++VEFLEVAITS+VFLKGVYPS AFERRRYMNVVV RARHPQLRD
Sbjct: 1   MDSKNNQSPT---SRILVEFLEVAITSVVFLKGVYPSDAFERRRYMNVVVQRARHPQLRD 57

Query: 475 YIHSAVIGLQPFIEK 431
           YIHSAV GL PFI+K
Sbjct: 58  YIHSAVSGLLPFIQK 72


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