BLASTX nr result

ID: Coptis25_contig00023871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023871
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16325.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_003541992.1| PREDICTED: uncharacterized protein LOC100812...    87   2e-15
ref|XP_003540187.1| PREDICTED: uncharacterized protein LOC100779...    85   5e-15
ref|XP_002314279.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_004149918.1| PREDICTED: uncharacterized protein LOC101207...    84   9e-15

>emb|CBI16325.3| unnamed protein product [Vitis vinifera]
          Length = 734

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = +3

Query: 222 MSGSQKEGRMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSA 392
           M  SQ +GRMEGWL+LIRSNR GLQYSRKRYF+L+DH LK+FKS P+S  + PVRSA
Sbjct: 1   MGVSQNDGRMEGWLFLIRSNRFGLQYSRKRYFVLEDHYLKSFKSVPISKDEVPVRSA 57


>ref|XP_003541992.1| PREDICTED: uncharacterized protein LOC100812931 [Glycine max]
          Length = 738

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/59 (71%), Positives = 49/59 (83%), Gaps = 3/59 (5%)
 Frame = +3

Query: 225 SGSQKEG---RMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSA 392
           S SQ +G   RMEGWLYLIR NRIGLQ+SRKRYF+LD + L++FKS P+SN QDPVRSA
Sbjct: 10  SASQSDGISSRMEGWLYLIRFNRIGLQFSRKRYFVLDGNLLRSFKSVPVSNNQDPVRSA 68


>ref|XP_003540187.1| PREDICTED: uncharacterized protein LOC100779206 [Glycine max]
          Length = 731

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = +3

Query: 231 SQKEGRMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSA 392
           S    RMEGWLYLIR NRIGLQ+SRKRYF+LD + L++FKS P+SN QDPVRSA
Sbjct: 13  SDASSRMEGWLYLIRFNRIGLQFSRKRYFVLDGNLLRSFKSVPVSNNQDPVRSA 66


>ref|XP_002314279.1| predicted protein [Populus trichocarpa] gi|222850687|gb|EEE88234.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = +3

Query: 249 MEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSA 392
           MEGWLYLIRSNRIGLQYSRKRYF+L  H L++FKS PLS  QDPVRSA
Sbjct: 1   MEGWLYLIRSNRIGLQYSRKRYFVLQHHLLQSFKSVPLSKNQDPVRSA 48


>ref|XP_004149918.1| PREDICTED: uncharacterized protein LOC101207368 [Cucumis sativus]
          Length = 733

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/57 (64%), Positives = 46/57 (80%)
 Frame = +3

Query: 222 MSGSQKEGRMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSA 392
           M    ++G+MEGWLYLIRSNR GLQYS+KRYF+L D CLK+FKS P+S  ++P RSA
Sbjct: 1   MGAPIEDGKMEGWLYLIRSNRFGLQYSQKRYFVLQDDCLKSFKSVPVSGNEEPNRSA 57


Top