BLASTX nr result

ID: Coptis25_contig00023865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023865
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785...   135   3e-30
ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253...   134   8e-30
ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819...   134   1e-29
ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase rad...   126   2e-27
ref|NP_174595.1| fringe-related protein [Arabidopsis thaliana] g...   125   3e-27

>ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785910 [Glycine max]
          Length = 545

 Score =  135 bits (340), Expect = 3e-30
 Identities = 75/137 (54%), Positives = 81/137 (59%), Gaps = 41/137 (29%)
 Frame = +1

Query: 229 LPPIMFSEDISRFRYTNPTGHLSGLCISRIVSECFCLGLPNVRWFVLCDDDTIFNPDILV 408
           LPPIM SEDIS FRYTNP GH SGL ISRIV E FCLGL +VRWFVLCDDDTIFN + LV
Sbjct: 181 LPPIMISEDISYFRYTNPIGHPSGLRISRIVRESFCLGLSDVRWFVLCDDDTIFNVNNLV 240

Query: 409 NVLN-----------------------------------------KAISEIQDECLEHYP 465
           +VL+                                         KA+SEI DEC+E YP
Sbjct: 241 DVLSKYNSSEMIYIGSPSESHSANTYFSHSMAFGGGGIAISHSLAKALSEILDECIERYP 300

Query: 466 MLYSSDDRLHACIAELG 516
            LY SDDRLHACI ELG
Sbjct: 301 KLYGSDDRLHACITELG 317


>ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253017 [Vitis vinifera]
          Length = 533

 Score =  134 bits (337), Expect = 8e-30
 Identities = 77/145 (53%), Positives = 84/145 (57%), Gaps = 41/145 (28%)
 Frame = +1

Query: 205 APSWALSTLPPIMFSEDISRFRYTNPTGHLSGLCISRIVSECFCLGLPNVRWFVLCDDDT 384
           +P     +LP IM SEDISRFRYTNPTGH SGL ISRI+SE F LGLP+VRWFVL DDDT
Sbjct: 161 SPEEGDDSLPAIMVSEDISRFRYTNPTGHPSGLRISRILSESFRLGLPDVRWFVLGDDDT 220

Query: 385 IFNPDILVNVLNK-----------------------------------------AISEIQ 441
           IFN D LV VLNK                                         A+S+IQ
Sbjct: 221 IFNADNLVTVLNKYDPSEMVYIGGPSESHSANSYFSYSMAFGGGGIAISHPLAEALSKIQ 280

Query: 442 DECLEHYPMLYSSDDRLHACIAELG 516
           D CL+ YP LY SDDRLHACI ELG
Sbjct: 281 DGCLDRYPKLYGSDDRLHACITELG 305


>ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819814 [Glycine max]
          Length = 545

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/137 (54%), Positives = 80/137 (58%), Gaps = 41/137 (29%)
 Frame = +1

Query: 229 LPPIMFSEDISRFRYTNPTGHLSGLCISRIVSECFCLGLPNVRWFVLCDDDTIFNPDILV 408
           LPPIM SED S FRYTNP GH SGL ISRIV E FCLGL +VRWFVLCDDDTIFN + LV
Sbjct: 181 LPPIMISEDTSYFRYTNPVGHPSGLRISRIVRESFCLGLSDVRWFVLCDDDTIFNVNNLV 240

Query: 409 NVLN-----------------------------------------KAISEIQDECLEHYP 465
           +VL+                                         KA+SEI DEC+E YP
Sbjct: 241 DVLSKYNSSEMIYIGSPSESHSANTYFSHSMAFGGSGIAISYPLAKALSEILDECIERYP 300

Query: 466 MLYSSDDRLHACIAELG 516
            LY SDDRLHACI ELG
Sbjct: 301 KLYGSDDRLHACITELG 317


>ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase radical fringe, putative
           [Ricinus communis] gi|223541956|gb|EEF43502.1|
           beta-1,3-n-acetylglucosaminyltransferase radical fringe,
           putative [Ricinus communis]
          Length = 538

 Score =  126 bits (316), Expect = 2e-27
 Identities = 83/186 (44%), Positives = 95/186 (51%), Gaps = 44/186 (23%)
 Frame = +1

Query: 91  KEL*MGISLARQTLERTREN---WAELRRLRGDWRPYFNPCAPSWALSTLPPIMFSEDIS 261
           K +  GI+ + Q  ++ RE    W     +RG            W   +LP IM SED S
Sbjct: 123 KHIMFGIAGSSQLWKQRREFVRLWWRPNNMRGHVWLEEEVSKEDWD-DSLPQIMISEDTS 181

Query: 262 RFRYTNPTGHLSGLCISRIVSECFCLGLPNVRWFVLCDDDTIFNPDILVNVLNK------ 423
           RFRYTNPTGH SGL ISRIV E F LGLP+VRWFVL DDDTIFN D LV VL+K      
Sbjct: 182 RFRYTNPTGHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVGVLSKYDSSEM 241

Query: 424 -----------------------------------AISEIQDECLEHYPMLYSSDDRLHA 498
                                              A+S I D+CLE Y  LY SDDRLHA
Sbjct: 242 VYVGAPSESHSANTYFSHSMAYGGGGIAISYPLAEALSNILDDCLERYHKLYGSDDRLHA 301

Query: 499 CIAELG 516
           CI+ELG
Sbjct: 302 CISELG 307


>ref|NP_174595.1| fringe-related protein [Arabidopsis thaliana]
           gi|12322571|gb|AAG51285.1|AC027035_8 unknown protein
           [Arabidopsis thaliana] gi|332193453|gb|AEE31574.1|
           fringe-related protein [Arabidopsis thaliana]
          Length = 548

 Score =  125 bits (315), Expect = 3e-27
 Identities = 81/182 (44%), Positives = 95/182 (52%), Gaps = 45/182 (24%)
 Frame = +1

Query: 106 GISLARQTLERTREN---WAELRRLRGD-WRPYFNPCAPSWALSTLPPIMFSEDISRFRY 273
           GI+ + Q  ER +E    W +  ++RG  W       +P     +LPPI+ SED SRFRY
Sbjct: 137 GIAGSSQLWERRKELVRLWWKPSQMRGHVWLE--EQVSPEEGDDSLPPIIVSEDSSRFRY 194

Query: 274 TNPTGHLSGLCISRIVSECFCLGLPNVRWFVLCDDDTIFNPDILVNVLNK---------- 423
           TNPTGH SGL ISRI  E F L LPNVRWFVL DDDTIFN   L+ VL+K          
Sbjct: 195 TNPTGHPSGLRISRIAMESFRLSLPNVRWFVLGDDDTIFNVHNLLAVLSKYDPSEMVYIG 254

Query: 424 -------------------------------AISEIQDECLEHYPMLYSSDDRLHACIAE 510
                                          A+S I D+CL+ YP LY SDDRLHACI E
Sbjct: 255 NPSESHSANSYFSHNMAFGGGGIAISYPLAEALSRIHDDCLDRYPKLYGSDDRLHACITE 314

Query: 511 LG 516
           LG
Sbjct: 315 LG 316


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