BLASTX nr result
ID: Coptis25_contig00023861
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023861 (1605 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [S... 643 0.0 ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium d... 639 0.0 tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays] 637 e-180 gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japo... 632 e-179 ref|NP_001064917.1| Os10g0489200 [Oryza sativa Japonica Group] g... 632 e-179 >ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor] gi|241918309|gb|EER91453.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor] Length = 905 Score = 643 bits (1659), Expect = 0.0 Identities = 320/440 (72%), Positives = 376/440 (85%) Frame = +2 Query: 284 IETKISQLKPKLSAYWKQGESVPFLFLAKAFDMIANESSRITITEILCNVFTTVIHTTPK 463 ++ K S+ P +AYWK GE VPFLFLA+A D+I+NES RI ITEIL NVF TV+ TTP Sbjct: 296 LKKKGSEFDPMAAAYWKPGEPVPFLFLARALDLISNESGRIVITEILSNVFRTVMATTPD 355 Query: 464 DLISVVYLSANKIAPAHQGIELGIGDASIIKALAEAYGREVVHIKSQLETLGDLGLVAKA 643 DL++ VYLSAN+IAP H+GIELGIGDAS+I+ALAEAYGR+ H+K L+ LGDLGLVAKA Sbjct: 356 DLLATVYLSANRIAPPHEGIELGIGDASVIRALAEAYGRKEEHVKKDLKELGDLGLVAKA 415 Query: 644 SRSSQRVMFKPAPLTVVKVLDTFRAIAKESGNNSQEKKKNHIKGLLVAATDCEPQYLIRL 823 SRSSQ++MFKP PLT+ +VL TFRAIAKESG +SQ+KK+NH+KGLLVAATDCEPQY+ RL Sbjct: 416 SRSSQKMMFKPKPLTIARVLSTFRAIAKESGKDSQDKKRNHMKGLLVAATDCEPQYITRL 475 Query: 824 LQSKLRIGLAEQTLLVALGHAAVYSEKESAPSSQTQSSLEEAAKAVKQVYSVLPNYDLII 1003 LQSK+RIGLAE+T+ +ALG AAVYS+K S+P + QS EEAAK +KQ YSVLP YD I+ Sbjct: 476 LQSKMRIGLAEKTVQMALGQAAVYSDKNSSPP-KVQSPFEEAAKIIKQAYSVLPIYDKIV 534 Query: 1004 AALLDGGVCKLSETCSFTLGVPIGPMLAKPTKGVSEILDKFQDTEFTCEYKYDGERAQIH 1183 A+L+ GV KL ETC F++GVP+GPMLAK TK VSEI+DKFQ E+TCEYKYDGERAQIH Sbjct: 535 PAILEVGVWKLPETCKFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIH 594 Query: 1184 YLEDGSVEIYSRNAERNTGKFPDVVSSVERFKHSSVRSFVLDCEVVAYDREKQKILPFQV 1363 +EDGSVEIYSRNAERNTGK+PDVV +V RF+ +V+SFVLDCE+VAYDREKQKILPFQ+ Sbjct: 595 CMEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKQKILPFQI 654 Query: 1364 LSTRARKGVVMSDITVKVCIFAFDILYLNGQSLLQEQLKVRRELLYNSFQEVPGEFYFAT 1543 LSTRARKGV ++DI V VC F FDILY+NG+ LLQEQLK+RRE LYNSF+EVPG F AT Sbjct: 655 LSTRARKGVTINDIKVSVCTFGFDILYINGKPLLQEQLKIRREHLYNSFEEVPGVFQLAT 714 Query: 1544 AITSNDLEEIQKFLDAAVNS 1603 AITSNDLEEIQKFLD AVNS Sbjct: 715 AITSNDLEEIQKFLDTAVNS 734 >ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon] Length = 918 Score = 639 bits (1649), Expect = 0.0 Identities = 319/440 (72%), Positives = 376/440 (85%) Frame = +2 Query: 284 IETKISQLKPKLSAYWKQGESVPFLFLAKAFDMIANESSRITITEILCNVFTTVIHTTPK 463 ++ K S+ P +AYWK E VPFLFLA+A D+I+NES RI ITEIL NVF T+I TTP+ Sbjct: 281 LKKKGSEFDPMAAAYWKPTEPVPFLFLAQALDLISNESGRIVITEILSNVFRTIIATTPE 340 Query: 464 DLISVVYLSANKIAPAHQGIELGIGDASIIKALAEAYGREVVHIKSQLETLGDLGLVAKA 643 DL++ VYLSAN+IAP H+GIELGIGDASII+ALAEAYGR+ H+K L+ LGDLGLVAKA Sbjct: 341 DLLATVYLSANRIAPPHEGIELGIGDASIIRALAEAYGRKEEHVKKNLKELGDLGLVAKA 400 Query: 644 SRSSQRVMFKPAPLTVVKVLDTFRAIAKESGNNSQEKKKNHIKGLLVAATDCEPQYLIRL 823 SR SQ++M+KP PLT+ +VLDTFR IAKESG +SQ+KK++HIKGLLVAATDCEPQY+IRL Sbjct: 401 SRLSQKMMYKPKPLTIARVLDTFRTIAKESGKDSQDKKRSHIKGLLVAATDCEPQYIIRL 460 Query: 824 LQSKLRIGLAEQTLLVALGHAAVYSEKESAPSSQTQSSLEEAAKAVKQVYSVLPNYDLII 1003 LQSK+RIGLAE+T+ +ALG AAVYSE E +P ++ QS EEAAK +KQ YSVLP YD I+ Sbjct: 461 LQSKMRIGLAEKTVQMALGQAAVYSE-EGSPPAKVQSPFEEAAKIIKQAYSVLPIYDRIV 519 Query: 1004 AALLDGGVCKLSETCSFTLGVPIGPMLAKPTKGVSEILDKFQDTEFTCEYKYDGERAQIH 1183 LL+ GV KL ETC+F++GVP+GPMLAK TK VSEI+DKFQ E+TCEYKYDGERAQIH Sbjct: 520 PTLLEAGVWKLPETCNFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIH 579 Query: 1184 YLEDGSVEIYSRNAERNTGKFPDVVSSVERFKHSSVRSFVLDCEVVAYDREKQKILPFQV 1363 +EDGSVEIYSRNAERNTGK+PDVV +V RF+ +V+SFVLDCE+VAYDREK+KILPFQ+ Sbjct: 580 CMEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPAVKSFVLDCEIVAYDREKKKILPFQI 639 Query: 1364 LSTRARKGVVMSDITVKVCIFAFDILYLNGQSLLQEQLKVRRELLYNSFQEVPGEFYFAT 1543 LSTRARKGV ++DI V VC F FDILY+NG+ LLQEQLKVRRE LYNSF+EVPG F AT Sbjct: 640 LSTRARKGVTINDIKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGIFQLAT 699 Query: 1544 AITSNDLEEIQKFLDAAVNS 1603 AITSNDLEEIQKFLD AVNS Sbjct: 700 AITSNDLEEIQKFLDVAVNS 719 >tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays] Length = 909 Score = 637 bits (1643), Expect = e-180 Identities = 317/440 (72%), Positives = 373/440 (84%) Frame = +2 Query: 284 IETKISQLKPKLSAYWKQGESVPFLFLAKAFDMIANESSRITITEILCNVFTTVIHTTPK 463 ++ K S+ P AYWK GE VPFLFLA+A D+I+NES RI ITEIL NVF TV+ TTP Sbjct: 274 LKKKGSEFDPMAVAYWKPGEPVPFLFLARALDLISNESGRIVITEILSNVFRTVMATTPD 333 Query: 464 DLISVVYLSANKIAPAHQGIELGIGDASIIKALAEAYGREVVHIKSQLETLGDLGLVAKA 643 DL++ VYLSAN+IAP H+GIELGIGDAS+I+ALAEAYGR+ H+K L+ LGDLGLVAKA Sbjct: 334 DLLATVYLSANRIAPPHEGIELGIGDASVIRALAEAYGRKEEHVKKDLKELGDLGLVAKA 393 Query: 644 SRSSQRVMFKPAPLTVVKVLDTFRAIAKESGNNSQEKKKNHIKGLLVAATDCEPQYLIRL 823 SRSSQ++MFKP PLT+ +VL TFR IAKESG +SQ+KK+NH+KGLLVAATDCEPQY+ RL Sbjct: 394 SRSSQKMMFKPKPLTIARVLSTFRTIAKESGKDSQDKKRNHMKGLLVAATDCEPQYITRL 453 Query: 824 LQSKLRIGLAEQTLLVALGHAAVYSEKESAPSSQTQSSLEEAAKAVKQVYSVLPNYDLII 1003 LQSK+RIGLAE+T+ +ALG AAVY++K P + QS EEAAK +KQ YSVLP YD I+ Sbjct: 454 LQSKMRIGLAEKTVQMALGQAAVYADKNPLPP-KVQSPFEEAAKIIKQAYSVLPIYDKIV 512 Query: 1004 AALLDGGVCKLSETCSFTLGVPIGPMLAKPTKGVSEILDKFQDTEFTCEYKYDGERAQIH 1183 A+L+ GV KL ETC F++GVP+GPMLAK TK VSEI+DKFQ E+TCEYKYDGERAQIH Sbjct: 513 PAILEVGVWKLPETCKFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIH 572 Query: 1184 YLEDGSVEIYSRNAERNTGKFPDVVSSVERFKHSSVRSFVLDCEVVAYDREKQKILPFQV 1363 +EDGSVEIYSRNAERNTGK+PDVV +V RF+ ++V+SFVLDCE+VAYDREKQKILPFQ+ Sbjct: 573 CMEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKATVKSFVLDCEIVAYDREKQKILPFQI 632 Query: 1364 LSTRARKGVVMSDITVKVCIFAFDILYLNGQSLLQEQLKVRRELLYNSFQEVPGEFYFAT 1543 LSTRARKGV ++DI V VC F FDILY+NG+ LLQEQLK+RRE LYNSF+EVPG F AT Sbjct: 633 LSTRARKGVTINDIKVSVCTFGFDILYINGKPLLQEQLKIRREHLYNSFEEVPGVFKLAT 692 Query: 1544 AITSNDLEEIQKFLDAAVNS 1603 AITSNDLEEIQKFLD AVNS Sbjct: 693 AITSNDLEEIQKFLDTAVNS 712 >gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group] gi|31432783|gb|AAP54376.1| DNA ligase, putative, expressed [Oryza sativa Japonica Group] gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza sativa Japonica Group] Length = 810 Score = 632 bits (1630), Expect = e-179 Identities = 320/440 (72%), Positives = 370/440 (84%) Frame = +2 Query: 284 IETKISQLKPKLSAYWKQGESVPFLFLAKAFDMIANESSRITITEILCNVFTTVIHTTPK 463 ++ K S+ P +AYW E VPFLFLA+A D+I+NES RI ITEIL NVF TVI TTP+ Sbjct: 174 LKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVFRTVIATTPE 233 Query: 464 DLISVVYLSANKIAPAHQGIELGIGDASIIKALAEAYGREVVHIKSQLETLGDLGLVAKA 643 DL++ VYLSAN+IAP H+G ELGIGDASII+ALAEAYGR H+K L+ LGDLGLVAKA Sbjct: 234 DLLATVYLSANRIAPPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKELGDLGLVAKA 293 Query: 644 SRSSQRVMFKPAPLTVVKVLDTFRAIAKESGNNSQEKKKNHIKGLLVAATDCEPQYLIRL 823 SR SQ++M+KP PLT+ VL FR IAKESG +SQ+KK+NHIKGLLVAATDCEPQY+ RL Sbjct: 294 SRLSQKMMYKPKPLTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATDCEPQYITRL 353 Query: 824 LQSKLRIGLAEQTLLVALGHAAVYSEKESAPSSQTQSSLEEAAKAVKQVYSVLPNYDLII 1003 LQSK+RIGLAE+T+ +ALG AAVYSEK S PS + QS EEAAK +KQVYSVLP YD I+ Sbjct: 354 LQSKMRIGLAEKTVQMALGQAAVYSEKHSPPS-KIQSPFEEAAKIIKQVYSVLPIYDKIV 412 Query: 1004 AALLDGGVCKLSETCSFTLGVPIGPMLAKPTKGVSEILDKFQDTEFTCEYKYDGERAQIH 1183 A+L+ GV KL E CSF++GVP+GPMLAK TK VSEI+DKFQ E+TCEYKYDGERAQIH Sbjct: 413 PAILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIH 472 Query: 1184 YLEDGSVEIYSRNAERNTGKFPDVVSSVERFKHSSVRSFVLDCEVVAYDREKQKILPFQV 1363 LEDGSVEIYSRNAERNTGK+PDVV +V RF+ +V+SFVLDCE+VAYDREK+KILPFQ+ Sbjct: 473 CLEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKKKILPFQI 532 Query: 1364 LSTRARKGVVMSDITVKVCIFAFDILYLNGQSLLQEQLKVRRELLYNSFQEVPGEFYFAT 1543 LSTRARKGV +SDI V VC F FDILY+NG+ LLQEQLKVRRE LYNSF+EVPG F AT Sbjct: 533 LSTRARKGVTISDIKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGVFQLAT 592 Query: 1544 AITSNDLEEIQKFLDAAVNS 1603 +ITSNDLEEIQKFLD AVNS Sbjct: 593 SITSNDLEEIQKFLDTAVNS 612 >ref|NP_001064917.1| Os10g0489200 [Oryza sativa Japonica Group] gi|113639526|dbj|BAF26831.1| Os10g0489200 [Oryza sativa Japonica Group] Length = 828 Score = 632 bits (1630), Expect = e-179 Identities = 320/440 (72%), Positives = 370/440 (84%) Frame = +2 Query: 284 IETKISQLKPKLSAYWKQGESVPFLFLAKAFDMIANESSRITITEILCNVFTTVIHTTPK 463 ++ K S+ P +AYW E VPFLFLA+A D+I+NES RI ITEIL NVF TVI TTP+ Sbjct: 280 LKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVFRTVIATTPE 339 Query: 464 DLISVVYLSANKIAPAHQGIELGIGDASIIKALAEAYGREVVHIKSQLETLGDLGLVAKA 643 DL++ VYLSAN+IAP H+G ELGIGDASII+ALAEAYGR H+K L+ LGDLGLVAKA Sbjct: 340 DLLATVYLSANRIAPPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKELGDLGLVAKA 399 Query: 644 SRSSQRVMFKPAPLTVVKVLDTFRAIAKESGNNSQEKKKNHIKGLLVAATDCEPQYLIRL 823 SR SQ++M+KP PLT+ VL FR IAKESG +SQ+KK+NHIKGLLVAATDCEPQY+ RL Sbjct: 400 SRLSQKMMYKPKPLTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATDCEPQYITRL 459 Query: 824 LQSKLRIGLAEQTLLVALGHAAVYSEKESAPSSQTQSSLEEAAKAVKQVYSVLPNYDLII 1003 LQSK+RIGLAE+T+ +ALG AAVYSEK S PS + QS EEAAK +KQVYSVLP YD I+ Sbjct: 460 LQSKMRIGLAEKTVQMALGQAAVYSEKHSPPS-KIQSPFEEAAKIIKQVYSVLPIYDKIV 518 Query: 1004 AALLDGGVCKLSETCSFTLGVPIGPMLAKPTKGVSEILDKFQDTEFTCEYKYDGERAQIH 1183 A+L+ GV KL E CSF++GVP+GPMLAK TK VSEI+DKFQ E+TCEYKYDGERAQIH Sbjct: 519 PAILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIH 578 Query: 1184 YLEDGSVEIYSRNAERNTGKFPDVVSSVERFKHSSVRSFVLDCEVVAYDREKQKILPFQV 1363 LEDGSVEIYSRNAERNTGK+PDVV +V RF+ +V+SFVLDCE+VAYDREK+KILPFQ+ Sbjct: 579 CLEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKKKILPFQI 638 Query: 1364 LSTRARKGVVMSDITVKVCIFAFDILYLNGQSLLQEQLKVRRELLYNSFQEVPGEFYFAT 1543 LSTRARKGV +SDI V VC F FDILY+NG+ LLQEQLKVRRE LYNSF+EVPG F AT Sbjct: 639 LSTRARKGVTISDIKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGVFQLAT 698 Query: 1544 AITSNDLEEIQKFLDAAVNS 1603 +ITSNDLEEIQKFLD AVNS Sbjct: 699 SITSNDLEEIQKFLDTAVNS 718