BLASTX nr result

ID: Coptis25_contig00023853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023853
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316257.1| folylpolyglutamate synthase [Populus trichoc...    77   1e-12
ref|XP_002466002.1| hypothetical protein SORBIDRAFT_01g049840 [S...    72   6e-11
ref|XP_002524236.1| folylpolyglutamate synthase, putative [Ricin...    71   8e-11
ref|XP_002277686.2| PREDICTED: folylpolyglutamate synthase, mito...    70   1e-10
ref|XP_003558996.1| PREDICTED: folylpolyglutamate synthase, mito...    70   1e-10

>ref|XP_002316257.1| folylpolyglutamate synthase [Populus trichocarpa]
           gi|222865297|gb|EEF02428.1| folylpolyglutamate synthase
           [Populus trichocarpa]
          Length = 587

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/83 (56%), Positives = 55/83 (66%), Gaps = 10/83 (12%)
 Frame = -3

Query: 221 VQEPIVCGISSLGFDHMEILGNTLGQIAGEKAGIFKVF---LELLCLVCH-------NCM 72
           VQ+PIVCGISSLG+DHMEILGNTL QIAGEKAGIFKVF   + +  L  H        C+
Sbjct: 178 VQKPIVCGISSLGYDHMEILGNTLAQIAGEKAGIFKVFFRTISIRLLAMHLFLNLNTICV 237

Query: 71  *KIIQLSASLFLLFFMQQGVPAF 3
             I  L   +F  F +Q G+PAF
Sbjct: 238 LIIDFLRIQVF-PFPIQDGIPAF 259


>ref|XP_002466002.1| hypothetical protein SORBIDRAFT_01g049840 [Sorghum bicolor]
           gi|241919856|gb|EER93000.1| hypothetical protein
           SORBIDRAFT_01g049840 [Sorghum bicolor]
          Length = 372

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = -3

Query: 221 VQEPIVCGISSLGFDHMEILGNTLGQIAGEKAGIFK 114
           V+EP+VCGISSLG+DHMEILGNTLG+IAGEKAGIFK
Sbjct: 40  VKEPVVCGISSLGYDHMEILGNTLGEIAGEKAGIFK 75


>ref|XP_002524236.1| folylpolyglutamate synthase, putative [Ricinus communis]
           gi|223536513|gb|EEF38160.1| folylpolyglutamate synthase,
           putative [Ricinus communis]
          Length = 531

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -3

Query: 221 VQEPIVCGISSLGFDHMEILGNTLGQIAGEKAGIFK 114
           VQ PIVCGISSLG+DHMEILGNTLG+IAGEKAGIFK
Sbjct: 177 VQTPIVCGISSLGYDHMEILGNTLGEIAGEKAGIFK 212


>ref|XP_002277686.2| PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Vitis
           vinifera]
          Length = 521

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = -3

Query: 221 VQEPIVCGISSLGFDHMEILGNTLGQIAGEKAGIFK 114
           VQEPIVCGI+SLG+DHMEILG+TLG+IAGEKAGIFK
Sbjct: 177 VQEPIVCGITSLGYDHMEILGHTLGEIAGEKAGIFK 212


>ref|XP_003558996.1| PREDICTED: folylpolyglutamate synthase, mitochondrial-like
           [Brachypodium distachyon]
          Length = 564

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = -3

Query: 221 VQEPIVCGISSLGFDHMEILGNTLGQIAGEKAGIFK 114
           V+ P+VCGISSLGFDHMEILGNTLG+IAGEKAGIFK
Sbjct: 230 VKAPVVCGISSLGFDHMEILGNTLGEIAGEKAGIFK 265


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