BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023852
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reduct...   495   e-138
ref|XP_002516790.1| ribonucleoside-diphosphate reductase small c...   494   e-137
ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137
ref|NP_001237733.1| ribonucleotide reductase small subunit [Glyc...   487   e-135
gb|AFK42213.1| unknown [Lotus japonicus]                              481   e-133

>ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A
           [Vitis vinifera]
          Length = 340

 Score =  495 bits (1275), Expect = e-138
 Identities = 241/287 (83%), Positives = 263/287 (91%), Gaps = 1/287 (0%)
 Frame = +2

Query: 20  MGSLKNE-NGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLSQ 196
           MGSL N  + R        PILM+NSQRFCMFP+RY+QLWEMYKKA+ASFWTAEEVDLS 
Sbjct: 1   MGSLTNGIDKRPDEEQEEEPILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLSH 60

Query: 197 DVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENI 376
           DVQQWE L++SEKHFISHVLAFFAASDGIVLENLAARFL D+Q+PEARAFYGFQIAMENI
Sbjct: 61  DVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHDIQIPEARAFYGFQIAMENI 120

Query: 377 HSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWALDWIQSSRTFAERIVAFSCVE 556
           HSEMYSLLLETYIKDSKEK  LFNA+E+I CVA KAKWALDWIQSS  FAER++AF+CVE
Sbjct: 121 HSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALDWIQSSTLFAERLIAFACVE 180

Query: 557 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRRQLNWQRVHHI 736
           GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL++QL WQ+VHHI
Sbjct: 181 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHHI 240

Query: 737 VHEAVEIETEFVCDALPCALIGMNSALMSQYIKFVADRLLVSLGCQR 877
           VHEAVEIET+FVC+ALPCALIGMN+ LMSQYIKFVADRLLV+LG +R
Sbjct: 241 VHEAVEIETQFVCEALPCALIGMNATLMSQYIKFVADRLLVALGYER 287


>ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis] gi|223543878|gb|EEF45404.1|
           ribonucleoside-diphosphate reductase small chain,
           putative [Ricinus communis]
          Length = 342

 Score =  494 bits (1271), Expect = e-137
 Identities = 243/288 (84%), Positives = 259/288 (89%), Gaps = 2/288 (0%)
 Frame = +2

Query: 20  MGSLKN--ENGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLS 193
           MGSL N  +  R        PIL E +QRFCMFP+RYK LWEMYKKA+ASFWTAEEVDLS
Sbjct: 1   MGSLTNSKDEERAREDEEEEPILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLS 60

Query: 194 QDVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMEN 373
           QDVQQWE L+ SEKHFISHVLAFFAASDGIVLENLAARFL D+QVPEARAFYGFQIAMEN
Sbjct: 61  QDVQQWETLSVSEKHFISHVLAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMEN 120

Query: 374 IHSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWALDWIQSSRTFAERIVAFSCV 553
           IHSEMYSLLLETYIKDS+EK+ LFNA+E IPCVARKAKWALDWI SS  +AER+VAF+CV
Sbjct: 121 IHSEMYSLLLETYIKDSREKNRLFNAIETIPCVARKAKWALDWIHSSSLYAERLVAFACV 180

Query: 554 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRRQLNWQRVHH 733
           EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL++QL WQ+V  
Sbjct: 181 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLQWQKVQQ 240

Query: 734 IVHEAVEIETEFVCDALPCALIGMNSALMSQYIKFVADRLLVSLGCQR 877
           IVHEAVEIETEFVCDALPCALIGMNS LMSQYIKFVADRLLV+LG QR
Sbjct: 241 IVHEAVEIETEFVCDALPCALIGMNSTLMSQYIKFVADRLLVALGYQR 288


>ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  493 bits (1268), Expect = e-137
 Identities = 239/288 (82%), Positives = 263/288 (91%), Gaps = 2/288 (0%)
 Frame = +2

Query: 20  MGSLKN--ENGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLS 193
           MGSL+N  E+ R        PIL E +QRFCMFP+RYK+LWEMYKKA+ASFWTAEEVDLS
Sbjct: 1   MGSLRNGTESERIREEDKQEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLS 60

Query: 194 QDVQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMEN 373
           +D+QQWE L+DSEKHFISHVLAFFAASDGIVLENLAARFL DVQ+PEARAFYGFQIAMEN
Sbjct: 61  RDMQQWEALSDSEKHFISHVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMEN 120

Query: 374 IHSEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWALDWIQSSRTFAERIVAFSCV 553
           IHSEMYSLLLETYIKDS+EK  LFNA+ENIPCVA KAKWALDWIQSS  FAER+VAF+C+
Sbjct: 121 IHSEMYSLLLETYIKDSREKHRLFNAIENIPCVAEKAKWALDWIQSSMVFAERLVAFACI 180

Query: 554 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRRQLNWQRVHH 733
           EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+RQL+WQ+V+H
Sbjct: 181 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQRQLHWQKVYH 240

Query: 734 IVHEAVEIETEFVCDALPCALIGMNSALMSQYIKFVADRLLVSLGCQR 877
           IV EAVEIET+FVC+ALPCALIGMN+ LM  YIKFVADRLLV+LG Q+
Sbjct: 241 IVGEAVEIETKFVCEALPCALIGMNATLMGDYIKFVADRLLVALGYQK 288


>ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
           gi|4894211|gb|AAD32302.1| ribonucleotide reductase small
           subunit [Glycine max]
          Length = 339

 Score =  487 bits (1254), Expect = e-135
 Identities = 240/286 (83%), Positives = 258/286 (90%)
 Frame = +2

Query: 20  MGSLKNENGRXXXXXXXXPILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLSQD 199
           MGSL+N NG         PILME SQRFCMFP+RYKQ+WEMYKKA+ASFWTAEEVDLS D
Sbjct: 1   MGSLEN-NGVDKARDEQEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYD 59

Query: 200 VQQWEKLTDSEKHFISHVLAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENIH 379
           VQ WE L+ SEKHFI+HVLAFFAASDGIVLENLAARFL DVQ+PEARAFYGFQIAMENIH
Sbjct: 60  VQHWETLSVSEKHFITHVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIH 119

Query: 380 SEMYSLLLETYIKDSKEKDSLFNAVENIPCVARKAKWALDWIQSSRTFAERIVAFSCVEG 559
           SEMYSLLLETYIKDS+EK  LFNA+EN+PCVARKA+WAL WI SS +FAER+VAF+CVEG
Sbjct: 120 SEMYSLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWIHSSTSFAERLVAFACVEG 179

Query: 560 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRRQLNWQRVHHIV 739
           IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR+ L   +VH +V
Sbjct: 180 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKPLISDQVHKLV 239

Query: 740 HEAVEIETEFVCDALPCALIGMNSALMSQYIKFVADRLLVSLGCQR 877
           HEAVEIETEFVCDALPCALIGMNS LMSQYIKFVADRLLV+LG QR
Sbjct: 240 HEAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADRLLVALGYQR 285


>gb|AFK42213.1| unknown [Lotus japonicus]
          Length = 351

 Score =  481 bits (1237), Expect = e-133
 Identities = 230/268 (85%), Positives = 253/268 (94%)
 Frame = +2

Query: 74  PILMENSQRFCMFPVRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHV 253
           PILME +QRFCMFP+RYKQ+WEMYKKAQASFWTAEEVDL+ DVQ W  L++SEKHFI+HV
Sbjct: 30  PILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFITHV 89

Query: 254 LAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEK 433
           LAFFAASDGIVLENLAARFL DVQ+PEARAFYGFQIAMENIHSEMYSLLLET IKDS+EK
Sbjct: 90  LAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSREK 149

Query: 434 DSLFNAVENIPCVARKAKWALDWIQSSRTFAERIVAFSCVEGIFFSGSFCAIFWLKKRGL 613
             LFNA+EN+PCVARKA+WAL+WI SS +FAER+VAF+C+EGIFFSGSFC+IFWLKKRGL
Sbjct: 150 HRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEGIFFSGSFCSIFWLKKRGL 209

Query: 614 MPGLTFSNELISRDEGLHCDFACLLYSLLRRQLNWQRVHHIVHEAVEIETEFVCDALPCA 793
           MPGLTFSNELISRDEGLHCDFACLLYSLL+R L+ +RVHHIVHEAVEIETEFVC+ALPCA
Sbjct: 210 MPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEALPCA 269

Query: 794 LIGMNSALMSQYIKFVADRLLVSLGCQR 877
           LIGMNS LMSQYIKFVADRLLVSLG Q+
Sbjct: 270 LIGMNSTLMSQYIKFVADRLLVSLGYQK 297