BLASTX nr result

ID: Coptis25_contig00023835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023835
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-54
ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256...   215   9e-54
emb|CAN77553.1| hypothetical protein VITISV_017397 [Vitis vinifera]   215   9e-54
ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252...   214   1e-53
ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257...   214   1e-53

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  216 bits (550), Expect = 4e-54
 Identities = 116/259 (44%), Positives = 160/259 (61%), Gaps = 18/259 (6%)
 Frame = -2

Query: 728 YLVDSCGLSHEKAVSVSKKVQFETPTKPDSVLTLFRDHDFTNIHISKIIPKMPRLLLSDA 549
           YLV SCGL  E A+  S+KVQF++P +PDSVL L R+H F+   IS ++ K P LLLS+ 
Sbjct: 66  YLVHSCGLPLESAILTSQKVQFQSPERPDSVLALLRNHGFSRTQISSLVKKRPFLLLSNP 125

Query: 548 AKTLKPKLEFFNSIGLSDPDLAKVISRDPFILMLSLENRIRPSISFLKAILRTDSDVLTV 369
             TL PKL+FF S+G+S P LA+ +S DP +L  SLEN+I PS +FLK ILR+D  +++ 
Sbjct: 126 TNTLLPKLDFFLSLGMSRPHLARTLSSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSA 185

Query: 368 IKRTTRVLNQDPQRRIAPNIALLRTIGVPDDNILKLVRRYAITLL--MDRFSEIVEEAKK 195
            KRTT +  +D  + + PN+ LLR +GVP   I  L+  +   ++   + FSE VEE +K
Sbjct: 186 FKRTTWIFLEDLSKNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEEFSENVEEVRK 245

Query: 194 MKFDPSQYQFI----------------RAIEVLKNWGWSEKETSMAFRIQPAFMSLSEKN 63
           M FDP++  F+                R  EV K WGW++ +   AFR  P  M LSEK 
Sbjct: 246 MGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRKHPHCMMLSEKK 305

Query: 62  IMTTMEFLVNKMGYDSLQI 6
           IM  ++F VNKMG+ S +I
Sbjct: 306 IMKGLDFFVNKMGWPSKEI 324


>ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256384 [Vitis vinifera]
          Length = 396

 Score =  215 bits (547), Expect = 9e-54
 Identities = 117/259 (45%), Positives = 160/259 (61%), Gaps = 17/259 (6%)
 Frame = -2

Query: 728 YLVDSCGLSHEKAVSVSKKVQFETPTKPDSVLTLFRDHDFTNIHISKIIPKMPRLLLSDA 549
           YLV+SCGLSH+ A+S SK + FE P KP+SVL  F  H F+    SKI+   P+LLLSD 
Sbjct: 59  YLVNSCGLSHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDP 118

Query: 548 AKTLKPKLEFFNSIGLSDPDLAKVISRDPFILMLSLENRIRPSISFLKAILRTDSDVLTV 369
            KTL PKL+FF S G S PD+AK+++  P I+  SLEN++ PS +F K  L++D   +TV
Sbjct: 119 DKTLLPKLQFFYSKGASKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITV 178

Query: 368 IKRTTRVLNQDPQRRIAPNIALLRTIGVPDDNILKLVRRYAITLLM--DRFSEIVEEAKK 195
           +KR +R+L  D    +A N+  L+  GVP  NI  L+R   +  ++  + F E +EE KK
Sbjct: 179 VKRFSRILLFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKK 238

Query: 194 MKFDPSQYQFI---------------RAIEVLKNWGWSEKETSMAFRIQPAFMSLSEKNI 60
           M F+PSQ +F+               R I++ K+WGWSE+E  +AF   P  M  SE  I
Sbjct: 239 MGFNPSQMKFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKI 298

Query: 59  MTTMEFLVNKMGYDSLQIS 3
           MTTM+F VNKMG +S  I+
Sbjct: 299 MTTMDFFVNKMGRESSLIA 317


>emb|CAN77553.1| hypothetical protein VITISV_017397 [Vitis vinifera]
          Length = 719

 Score =  215 bits (547), Expect = 9e-54
 Identities = 117/259 (45%), Positives = 160/259 (61%), Gaps = 17/259 (6%)
 Frame = -2

Query: 728 YLVDSCGLSHEKAVSVSKKVQFETPTKPDSVLTLFRDHDFTNIHISKIIPKMPRLLLSDA 549
           YLV+SCGLSH+ A+S SK + FE P KP+SVL  F  H F+    SKI+   P+LLLSD 
Sbjct: 56  YLVNSCGLSHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDP 115

Query: 548 AKTLKPKLEFFNSIGLSDPDLAKVISRDPFILMLSLENRIRPSISFLKAILRTDSDVLTV 369
            KTL PKL+FF S G S PD+AK+++  P I+  SLEN++ PS +F K  L++D   +TV
Sbjct: 116 DKTLLPKLQFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITV 175

Query: 368 IKRTTRVLNQDPQRRIAPNIALLRTIGVPDDNILKLVRRYAITLLM--DRFSEIVEEAKK 195
           +KR +R+L  D    +A N+  L+  GVP  NI  L+R   +  ++  + F E +EE KK
Sbjct: 176 VKRFSRILLFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKK 235

Query: 194 MKFDPSQYQFI---------------RAIEVLKNWGWSEKETSMAFRIQPAFMSLSEKNI 60
           M F+PSQ +F+               R I++ K+WGWSE+E  +AF   P  M  SE  I
Sbjct: 236 MGFNPSQMKFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKI 295

Query: 59  MTTMEFLVNKMGYDSLQIS 3
           MTTM+F VNKMG +S  I+
Sbjct: 296 MTTMDFFVNKMGRESSLIA 314


>ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252802 [Vitis vinifera]
          Length = 399

 Score =  214 bits (546), Expect = 1e-53
 Identities = 123/259 (47%), Positives = 157/259 (60%), Gaps = 17/259 (6%)
 Frame = -2

Query: 728 YLVDSCGLSHEKAVSVSKKVQFETPTKPDSVLTLFRDHDFTNIHISKIIPKMPRLLLSDA 549
           YL+DSCGLSH+ A+S SK   FETP KP+SVL  F  H F+   ISKI+  +PRLL SD 
Sbjct: 55  YLIDSCGLSHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDP 114

Query: 548 AKTLKPKLEFFNSIGLSDPDLAKVISRDPFILMLSLENRIRPSISFLKAILRTDSDVLTV 369
            KTL PKL+FF S G S PD+AK++   P IL  SLEN+I PS +F K  L++D   +TV
Sbjct: 115 DKTLLPKLQFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITV 174

Query: 368 IKRTTRVLNQDPQRRIAPNIALLRTIGVPDDNILKLV--RRYAITLLMDRFSEIVEEAKK 195
           IKR +R+L  D    +A NI  L+  GVP  NI  L+  R  A  +  + F E +EE KK
Sbjct: 175 IKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKK 234

Query: 194 MKFDPSQYQFI---------------RAIEVLKNWGWSEKETSMAFRIQPAFMSLSEKNI 60
           M F+PSQ +F+               R I+  K WGWSE+E  +AF   P  M+ SE  I
Sbjct: 235 MGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKI 294

Query: 59  MTTMEFLVNKMGYDSLQIS 3
           M TM+F VNKMG +S  I+
Sbjct: 295 MATMDFFVNKMGRESSLIA 313


>ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257952 [Vitis vinifera]
          Length = 389

 Score =  214 bits (545), Expect = 1e-53
 Identities = 120/259 (46%), Positives = 158/259 (61%), Gaps = 17/259 (6%)
 Frame = -2

Query: 728 YLVDSCGLSHEKAVSVSKKVQFETPTKPDSVLTLFRDHDFTNIHISKIIPKMPRLLLSDA 549
           YL+DSCGLSH+ A+S SK ++FETP KPDSVL  F  H F+    SKI+  +PRLL SD 
Sbjct: 59  YLIDSCGLSHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDP 118

Query: 548 AKTLKPKLEFFNSIGLSDPDLAKVISRDPFILMLSLENRIRPSISFLKAILRTDSDVLTV 369
            KTL PKL+FF S G S PD+AK++   P IL  SLEN+I PS +FLK  L++D   +TV
Sbjct: 119 DKTLLPKLQFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITV 178

Query: 368 IKRTTRVLNQDPQRRIAPNIALLRTIGVPDDNI--LKLVRRYAITLLMDRFSEIVEEAKK 195
           +KR +R+L  D    +A N+  L+  GVP  NI  L + R  A  +  + F + +EE KK
Sbjct: 179 VKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKK 238

Query: 194 MKFDPSQYQFI---------------RAIEVLKNWGWSEKETSMAFRIQPAFMSLSEKNI 60
           M F+PSQ +F+               R I++ K WGWSE+E  +AF   P  M  SE  I
Sbjct: 239 MGFNPSQMKFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKI 298

Query: 59  MTTMEFLVNKMGYDSLQIS 3
           M  M+F VNKMG +S  I+
Sbjct: 299 MAKMDFFVNKMGRESSLIA 317


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