BLASTX nr result

ID: Coptis25_contig00023833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023833
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon...    68   7e-10
ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa]             66   3e-09
gb|AAW82443.1| proline dehydrogenase [Solanum lycopersicum]            66   3e-09
ref|XP_002329313.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera]
           gi|298204407|emb|CBI16887.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = +1

Query: 184 HGSIQETHACYNECASFMIEKVFAGTGAVVLATHNLESGEI 306
           H SI+ETHAC+N CASF++E++  G+GAVVLATHNLESG++
Sbjct: 366 HNSIEETHACFNGCASFLLERIAGGSGAVVLATHNLESGKL 406


>ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|222848255|gb|EEE85802.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +1

Query: 184 HGSIQETHACYNECASFMIEKVFAGTGAVVLATHNLESGEI 306
           H SIQETHACYN+CASFM+EK+   + AV+LATHN+ESG +
Sbjct: 305 HNSIQETHACYNDCASFMLEKIANSSDAVILATHNVESGRL 345


>gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa]
          Length = 508

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = +1

Query: 184 HGSIQETHACYNECASFMIEKVFAGTGAVVLATHNLESG 300
           H +I +THAC+N+CASFM+EK+  G+GAVVLATHN+ESG
Sbjct: 378 HNTIHQTHACFNDCASFMLEKIANGSGAVVLATHNIESG 416


>gb|AAW82443.1| proline dehydrogenase [Solanum lycopersicum]
          Length = 146

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/41 (65%), Positives = 36/41 (87%)
 Frame = +1

Query: 184 HGSIQETHACYNECASFMIEKVFAGTGAVVLATHNLESGEI 306
           H SI++THAC+N CA FMIE++  G+GAVVLATHN+ESG++
Sbjct: 82  HDSIEQTHACFNSCAEFMIEEIANGSGAVVLATHNIESGKL 122


>ref|XP_002329313.1| predicted protein [Populus trichocarpa] gi|222870767|gb|EEF07898.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +1

Query: 184 HGSIQETHACYNECASFMIEKVFAGTGAVVLATHNLESGEI 306
           H SIQETHACYN+C SFM+EK+   + AV+LATHN+ESG +
Sbjct: 322 HNSIQETHACYNDCVSFMLEKIANSSNAVILATHNVESGRL 362


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