BLASTX nr result

ID: Coptis25_contig00023832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023832
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_003555073.1| PREDICTED: proline dehydrogenase 2, mitochon...    91   7e-17
ref|XP_003552630.1| PREDICTED: proline dehydrogenase 2, mitochon...    91   7e-17
dbj|BAK02892.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   7e-17
dbj|BAM93580.1| proline dehydrogenase [Vigna unguiculata]              91   1e-16

>ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|222848255|gb|EEE85802.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/65 (64%), Positives = 52/65 (80%)
 Frame = +1

Query: 184 HGSIQETHTCYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 363
           H SIQETH CYN+CASFM+EK+   + AV+LATHN+ESG++AA KA  LGI KGN KL+F
Sbjct: 305 HNSIQETHACYNDCASFMLEKIANSSDAVILATHNVESGRLAATKALDLGIRKGNPKLEF 364

Query: 364 DELKG 378
            +L G
Sbjct: 365 AQLYG 369


>ref|XP_003555073.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like [Glycine
           max]
          Length = 500

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 40/65 (61%), Positives = 53/65 (81%)
 Frame = +1

Query: 184 HGSIQETHTCYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 363
           H +IQ+TH C+N+C+SFM+EK+  G G+VVLATHN+ESGK+A AKA  LG+GK N KL+F
Sbjct: 370 HNTIQDTHNCFNDCSSFMLEKIANGIGSVVLATHNIESGKLAVAKAHELGVGKVNHKLEF 429

Query: 364 DELKG 378
            +L G
Sbjct: 430 AQLYG 434


>ref|XP_003552630.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like [Glycine
           max]
          Length = 489

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/65 (63%), Positives = 53/65 (81%)
 Frame = +1

Query: 184 HGSIQETHTCYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 363
           H +I++TH C+N+C+SFM+EKV  G G VVLATHN+ESGK+AAAKA  LG+GK N KL+F
Sbjct: 359 HNTIEDTHKCFNDCSSFMLEKVANGPGGVVLATHNVESGKLAAAKAHELGVGKVNHKLEF 418

Query: 364 DELKG 378
            +L G
Sbjct: 419 AQLHG 423


>dbj|BAK02892.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 481

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/65 (63%), Positives = 55/65 (84%)
 Frame = +1

Query: 184 HGSIQETHTCYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 363
           HGSIQ+TH CYN CA+F++E+V  G+ +V+LATHN+ESG++AAA+AQ LGIGKG+  LQF
Sbjct: 348 HGSIQDTHDCYNGCAAFLLERVRRGSASVMLATHNVESGQLAAARAQELGIGKGDRNLQF 407

Query: 364 DELKG 378
            +L G
Sbjct: 408 AQLMG 412


>dbj|BAM93580.1| proline dehydrogenase [Vigna unguiculata]
          Length = 177

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/65 (64%), Positives = 52/65 (80%)
 Frame = +1

Query: 184 HGSIQETHTCYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 363
           H +I +TH C+NEC+SFM+EK+  G G VVLATHN+ESGK+AAAKA  LGIGK N KL+F
Sbjct: 47  HDTIDDTHKCFNECSSFMLEKIADGPGGVVLATHNVESGKLAAAKAHELGIGKVNHKLEF 106

Query: 364 DELKG 378
            +L G
Sbjct: 107 AQLHG 111


Top