BLASTX nr result
ID: Coptis25_contig00023827
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023827 (794 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528032.1| pentatricopeptide repeat-containing protein,... 212 7e-53 emb|CBI31329.3| unnamed protein product [Vitis vinifera] 211 1e-52 ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi... 211 1e-52 emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera] 211 1e-52 ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2... 210 2e-52 >ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 730 Score = 212 bits (540), Expect = 7e-53 Identities = 109/181 (60%), Positives = 137/181 (75%), Gaps = 1/181 (0%) Frame = +3 Query: 3 KDHXXXXXXXXXXYSKSGKMLEAQRIFDSMSVKDKVTYTSLIAGYGMQGRGHWALKLFDE 182 KD+ Y++SGK+LEA+R+FDS+S +D+VTYTSLIAGYG+QG G ALKLFDE Sbjct: 464 KDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDE 523 Query: 183 MNMSGIEADHITMVAVLSACSHSGLVDEGQMMFAKMINVYRINPRIEHFSCMVDLFGNAG 362 M I+ DH+TMVAVLSACSHSGLV EG +F M + Y I PR+EHF+CMVDLFG AG Sbjct: 524 MKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAG 583 Query: 363 LLRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAK 539 LL KA ++IT MPYRPS AM ATL+ A RI+GN I +WA K+LE+RPE+ +++LIA Sbjct: 584 LLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIAN 643 Query: 540 L 542 + Sbjct: 644 M 644 >emb|CBI31329.3| unnamed protein product [Vitis vinifera] Length = 753 Score = 211 bits (537), Expect = 1e-52 Identities = 103/181 (56%), Positives = 137/181 (75%), Gaps = 1/181 (0%) Frame = +3 Query: 3 KDHXXXXXXXXXXYSKSGKMLEAQRIFDSMSVKDKVTYTSLIAGYGMQGRGHWALKLFDE 182 KDH Y++SGK+LEA+R+FD + +DK+TYTS+IAGYGMQG G ALKLF+E Sbjct: 426 KDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEE 485 Query: 183 MNMSGIEADHITMVAVLSACSHSGLVDEGQMMFAKMINVYRINPRIEHFSCMVDLFGNAG 362 MN I+ DHITM+AVLSACSHSGLV +GQ++F KM ++Y + P +EHF+CM DLFG AG Sbjct: 486 MNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAG 545 Query: 363 LLRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAK 539 LL KA +II MPY+P+ AM ATL+ A RI+ NT I +WA K+LE++PE+ +++LIA Sbjct: 546 LLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIAN 605 Query: 540 L 542 + Sbjct: 606 M 606 >ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Vitis vinifera] Length = 748 Score = 211 bits (537), Expect = 1e-52 Identities = 103/181 (56%), Positives = 137/181 (75%), Gaps = 1/181 (0%) Frame = +3 Query: 3 KDHXXXXXXXXXXYSKSGKMLEAQRIFDSMSVKDKVTYTSLIAGYGMQGRGHWALKLFDE 182 KDH Y++SGK+LEA+R+FD + +DK+TYTS+IAGYGMQG G ALKLF+E Sbjct: 471 KDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEE 530 Query: 183 MNMSGIEADHITMVAVLSACSHSGLVDEGQMMFAKMINVYRINPRIEHFSCMVDLFGNAG 362 MN I+ DHITM+AVLSACSHSGLV +GQ++F KM ++Y + P +EHF+CM DLFG AG Sbjct: 531 MNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAG 590 Query: 363 LLRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAK 539 LL KA +II MPY+P+ AM ATL+ A RI+ NT I +WA K+LE++PE+ +++LIA Sbjct: 591 LLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIAN 650 Query: 540 L 542 + Sbjct: 651 M 651 >emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera] Length = 822 Score = 211 bits (537), Expect = 1e-52 Identities = 103/181 (56%), Positives = 137/181 (75%), Gaps = 1/181 (0%) Frame = +3 Query: 3 KDHXXXXXXXXXXYSKSGKMLEAQRIFDSMSVKDKVTYTSLIAGYGMQGRGHWALKLFDE 182 KDH Y++SGK+LEA+R+FD + +DK+TYTS+IAGYGMQG G ALKLF+E Sbjct: 545 KDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEE 604 Query: 183 MNMSGIEADHITMVAVLSACSHSGLVDEGQMMFAKMINVYRINPRIEHFSCMVDLFGNAG 362 MN I+ DHITM+AVLSACSHSGLV +GQ++F KM ++Y + P +EHF+CM DLFG AG Sbjct: 605 MNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAG 664 Query: 363 LLRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAK 539 LL KA +II MPY+P+ AM ATL+ A RI+ NT I +WA K+LE++PE+ +++LIA Sbjct: 665 LLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIAN 724 Query: 540 L 542 + Sbjct: 725 M 725 >ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa] Length = 683 Score = 210 bits (535), Expect = 2e-52 Identities = 106/168 (63%), Positives = 133/168 (79%), Gaps = 1/168 (0%) Frame = +3 Query: 42 YSKSGKMLEAQRIFDSMSVKDKVTYTSLIAGYGMQGRGHWALKLFDEMNMSGIEADHITM 221 Y++SGK+L A+R+FDS+ +DKVTYTSLIAGYG+QG G ALKLFDEM I+ D +TM Sbjct: 426 YARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTM 485 Query: 222 VAVLSACSHSGLVDEGQMMFAKMINVYRINPRIEHFSCMVDLFGNAGLLRKAVQIITEMP 401 VAVLSACSHSGLV EG ++F KM +Y I P +EHFSCMVDLFG AGLL KA ++IT MP Sbjct: 486 VAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMP 545 Query: 402 YRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAKL 542 YRP+ AM ATLV A RI+GNT I +WA K+LE++PE+ +++LIA + Sbjct: 546 YRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANM 593