BLASTX nr result

ID: Coptis25_contig00023806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023806
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [R...   412   e-113
ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111
ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-...   392   e-107
ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-...   392   e-106

>ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
            gi|223531126|gb|EEF32974.1| DNA-3-methyladenine
            glycosylase, putative [Ricinus communis]
          Length = 380

 Score =  412 bits (1060), Expect = e-113
 Identities = 226/377 (59%), Positives = 259/377 (68%), Gaps = 29/377 (7%)
 Frame = -3

Query: 1381 IRSEPMSEPEPRSVLGPAGNKSRSSFA--KPTSN---KSDVDITTTNTEQNKKRILK--- 1226
            +RS  +++ E R VLGP GN    S +  KP S    K +         Q KK +     
Sbjct: 7    VRSMNVADSETRPVLGPTGNNKAGSLSAKKPASKQLRKVETSPEAVKLGQEKKLVTVPTA 66

Query: 1225 ----------KVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTST 1097
                       VPSVLRR E       SLNASCSSD STDS  SR STGRL TRSNS  T
Sbjct: 67   SALSPKSHSVSVPSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRL-TRSNSLGT 125

Query: 1096 RRKQCXXXXXXXXXXXXXXXXXXXS----KKRCPWVTPNTEPCYAAFHDEEWGVPVHDDK 929
            RRKQ                         KK C WVTPN +PCY AFHDEEWG+PVHDDK
Sbjct: 126  RRKQYALKPRSVVSDGGLESPPPSDGSQAKKSCAWVTPNADPCYTAFHDEEWGIPVHDDK 185

Query: 928  KLFELLVFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSD 749
            KLFELLV SGALAE TWP IL KRHIFREVFA+FDPV VSKFNEKKI+APGSTA+SLLS+
Sbjct: 186  KLFELLVLSGALAELTWPAILSKRHIFREVFANFDPVVVSKFNEKKIIAPGSTASSLLSE 245

Query: 748  VKLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKDL 569
            +KLRAIIENARQI K+ DE GSFDKYIWSFVNYKPIV++FRY RQVP KT KADV+SKDL
Sbjct: 246  IKLRAIIENARQISKVTDELGSFDKYIWSFVNYKPIVSRFRYPRQVPVKTPKADVISKDL 305

Query: 568  LRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKEM 389
            +RRGFRSV  T++YSFMQV GLTNDHLI+CFRFQECIN     EE+G  +KVE++ +  +
Sbjct: 306  VRRGFRSVGPTVVYSFMQVAGLTNDHLISCFRFQECINAAEGKEENG--VKVEDKITDGV 363

Query: 388  LDLGLARAMDDFSFSSE 338
            ++  ++ AMD+ SFSSE
Sbjct: 364  VESQISIAMDELSFSSE 380


>ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|222865972|gb|EEF03103.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  407 bits (1047), Expect = e-111
 Identities = 221/378 (58%), Positives = 260/378 (68%), Gaps = 30/378 (7%)
 Frame = -3

Query: 1381 IRSEPMSEPEPRSVLGPAGNKSRS--SFAKPTSNKS-----------------DVDITTT 1259
            +RS  +++ E RSVLGP GN      S  KP S +S                  + +   
Sbjct: 7    VRSMNVADSEARSVLGPTGNNKAGPLSARKPVSKQSRKVEKSPEEVKLGEEKKTLTVPAV 66

Query: 1258 NTEQNKKRILKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTS 1100
             T   K   L  + SVLRR E       SLNASCSSD STDS  SR STGRL TRSNS  
Sbjct: 67   GTLSPKSHSLN-ISSVLRRHELLLHSNLSLNASCSSDASTDSFHSRASTGRL-TRSNSAG 124

Query: 1099 TRRKQCXXXXXXXXXXXXXXXXXXXS----KKRCPWVTPNTEPCYAAFHDEEWGVPVHDD 932
            TRRKQ                         KK C WVTPNT+PCYA FHDEEWGVP+HDD
Sbjct: 125  TRRKQYVLRPRSFVSEGGLESPPSPDDSQSKKSCAWVTPNTDPCYATFHDEEWGVPIHDD 184

Query: 931  KKLFELLVFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLS 752
            +KLFELLV SGALAE TWP IL KRHIFREVFADFDP+AVSKFNEKKILAPGSTA SLLS
Sbjct: 185  RKLFELLVLSGALAELTWPAILSKRHIFREVFADFDPIAVSKFNEKKILAPGSTATSLLS 244

Query: 751  DVKLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKD 572
            ++KLRAI+ENARQI K++DEFGSFDKYIWSFVNYKPIV++FRY RQVP KT KAD +SKD
Sbjct: 245  ELKLRAIVENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVPVKTPKADAISKD 304

Query: 571  LLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKE 392
            L+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQEC++      E+G  +K E+ ++ +
Sbjct: 305  LVRRGFRSVGPTVIYSFMQVAGITNDHLISCFRFQECLDAAEGKVENG--IKSEDIKTND 362

Query: 391  MLDLGLARAMDDFSFSSE 338
            +++  ++ A+D+ SFSSE
Sbjct: 363  VMESKISIAIDELSFSSE 380


>ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|222855322|gb|EEE92869.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  402 bits (1032), Expect = e-109
 Identities = 220/378 (58%), Positives = 261/378 (69%), Gaps = 30/378 (7%)
 Frame = -3

Query: 1381 IRSEPMSEPEPRSVLGPAGNKSR---SSFAKPTSNKSDVD--------------ITTTNT 1253
            +RS  +++ E R VLGP GN      +S  KP S +   D              + T  T
Sbjct: 7    VRSMNVADSEARPVLGPTGNTKAGPLTSARKPASKQLRKDGKSPEEAKLGEEKKVLTVPT 66

Query: 1252 EQN--KKRILKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTS 1100
              N   K +     SVLRR E       SLNASCSSD STDS  SR STGRL  RSN+  
Sbjct: 67   VGNLSPKSLSGNFSSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLI-RSNNVG 125

Query: 1099 TRRKQCXXXXXXXXXXXXXXXXXXXS----KKRCPWVTPNTEPCYAAFHDEEWGVPVHDD 932
            TRRKQ                         KK C WVTPNT+PCY AFHDEEWG+PVHDD
Sbjct: 126  TRRKQYVSKPRSVVSDGGLESLPSSDGSQSKKSCAWVTPNTDPCYTAFHDEEWGLPVHDD 185

Query: 931  KKLFELLVFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLS 752
            +KLFELLV SGALAE TWP IL KRH+FREVFADFDP+AVSKFNEKKI+APGSTA SLLS
Sbjct: 186  RKLFELLVLSGALAELTWPAILSKRHMFREVFADFDPIAVSKFNEKKIIAPGSTAASLLS 245

Query: 751  DVKLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKD 572
            ++KLRAIIENARQI K++DEFGSFDKYIWSFVNYKPIV++FRY RQVPAKT KAD +SKD
Sbjct: 246  ELKLRAIIENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVPAKTPKADAISKD 305

Query: 571  LLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKE 392
            L+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQECI+     EE+G  +K E+ ++ +
Sbjct: 306  LVRRGFRSVGPTVIYSFMQVAGVTNDHLISCFRFQECIDAAEGKEENG--IKSEDVKTDD 363

Query: 391  MLDLGLARAMDDFSFSSE 338
            +++  ++ ++D+ SFSSE
Sbjct: 364  IMESKISISIDELSFSSE 381


>ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
            [Glycine max]
          Length = 373

 Score =  392 bits (1008), Expect = e-107
 Identities = 213/369 (57%), Positives = 255/369 (69%), Gaps = 21/369 (5%)
 Frame = -3

Query: 1381 IRSEPMSEPEP-RSVLGPAGNKSRSSFAKPTSNKSDVDITTTNTEQNKKRILKKVPSV-- 1211
            +RS  + + E  R V GPAGNK+ S  ++ T++K          E  +K+   ++ SV  
Sbjct: 6    LRSMNVGDSEAARPVFGPAGNKTGSLSSRKTASKPLRKAEKLYNEAKEKKKSYEMSSVVA 65

Query: 1210 ---------LRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTSTRRKQCX 1079
                     LRR E       SLNASCSSD STDS  SR STGRL TRSNS    RK+  
Sbjct: 66   SPQSHSASVLRRHEQLLHCNLSLNASCSSDASTDSFHSRASTGRL-TRSNSLGCTRKRSV 124

Query: 1078 XXXXXXXXXXXXXXXXXXS--KKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKKLFELLVF 905
                              S  KKRC W+TPNTEPCYA FHDEEWGVPVHDDKKLFELLV 
Sbjct: 125  SKPRSVASDGVLESPPHGSQSKKRCAWITPNTEPCYATFHDEEWGVPVHDDKKLFELLVL 184

Query: 904  SGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDVKLRAIIE 725
            S AL+E +WP IL KRHIFREVF DFDPVAVSKFNEKKI+APGSTA+SLLSD+KLRAIIE
Sbjct: 185  SSALSELSWPAILSKRHIFREVFVDFDPVAVSKFNEKKIMAPGSTASSLLSDLKLRAIIE 244

Query: 724  NARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKDLLRRGFRSV 545
            NARQI K+++EFGSFDKYIWSFVN+KPI+++FRY RQVP KT KADV+SKDL+RRGFR V
Sbjct: 245  NARQISKVIEEFGSFDKYIWSFVNHKPIISRFRYPRQVPVKTPKADVISKDLVRRGFRGV 304

Query: 544  SATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKEMLDLGLARA 365
              T+IYSFMQV GLTNDHLI+CFRFQ+C+      EE+  K   +++    +++  L+ A
Sbjct: 305  GPTVIYSFMQVVGLTNDHLISCFRFQDCMAAAEGKEENAIKDDAQQKERDHVMESDLSIA 364

Query: 364  MDDFSFSSE 338
            +D+ S SSE
Sbjct: 365  IDNLSLSSE 373


>ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing] [Vitis
            vinifera] gi|297743642|emb|CBI36525.3| unnamed protein
            product [Vitis vinifera]
          Length = 375

 Score =  392 bits (1007), Expect = e-106
 Identities = 212/371 (57%), Positives = 260/371 (70%), Gaps = 23/371 (6%)
 Frame = -3

Query: 1381 IRSEPMSEPEPRSVLGPAGNKSRSSFA--KPTSN---------KSDVDI----TTTNTEQ 1247
            +RS  +++ E R VLGPAGNK+  S +  KP +          K D +I    ++     
Sbjct: 7    VRSMNVADSEVRPVLGPAGNKTMRSLSGRKPATKPLRKAEKATKDDEEIKALPSSNGAAS 66

Query: 1246 NKKRILKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTRSNSTSTRRK 1088
            +       VP VLRRQE       SLNASCSSD STDS  SR STGR+ TRS+ST+ RR 
Sbjct: 67   SPPSHSVSVPLVLRRQEQLLHSNLSLNASCSSDASTDSFHSRASTGRI-TRSSSTARRRS 125

Query: 1087 QCXXXXXXXXXXXXXXXXXXXS-KKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKKLFELL 911
                                   K+RC WVTPNT+  Y AFHDEEWGVPVHDDKKLFELL
Sbjct: 126  YASKPKVIVSDGVSESPPDGLKAKRRCAWVTPNTDLSYIAFHDEEWGVPVHDDKKLFELL 185

Query: 910  VFSGALAEQTWPTILMKRHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDVKLRAI 731
            V SGALAE TWPTIL KRHIFREVFADFDP+AV+K NEKK++APGS A+SL+S++KLR I
Sbjct: 186  VLSGALAELTWPTILSKRHIFREVFADFDPIAVAKLNEKKLMAPGSIASSLISELKLRGI 245

Query: 730  IENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVPAKTSKADVMSKDLLRRGFR 551
            IENARQ+ K++DEFGSFD+YIWSFVN+KPIV++FRY R VP KT KADV+SKDL+RRGFR
Sbjct: 246  IENARQMSKVIDEFGSFDEYIWSFVNHKPIVSRFRYPRHVPVKTPKADVISKDLVRRGFR 305

Query: 550  SVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGSKMKVEERRSKEMLDLGLA 371
            SV  T+IYSFMQV G+TNDHLI+CFRFQ+C+      EE+ +    EE++S  +++  L+
Sbjct: 306  SVGPTVIYSFMQVAGITNDHLISCFRFQDCVTAAEVKEEEITTGAAEEKKS-NVIESELS 364

Query: 370  RAMDDFSFSSE 338
            RA+D+ SFSSE
Sbjct: 365  RAIDELSFSSE 375


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