BLASTX nr result

ID: Coptis25_contig00023795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023795
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525210.1| zinc finger protein, putative [Ricinus commu...   176   2e-42
ref|XP_004137953.1| PREDICTED: uncharacterized protein LOC101209...   173   1e-41
ref|XP_002308497.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002322843.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_003537233.1| PREDICTED: uncharacterized protein LOC100810...   160   8e-38

>ref|XP_002525210.1| zinc finger protein, putative [Ricinus communis]
           gi|223535507|gb|EEF37176.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 275

 Score =  176 bits (445), Expect = 2e-42
 Identities = 78/137 (56%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
 Frame = +3

Query: 9   NNMFTLWGIGASSATILSKYIDIATGCWRFLDATG-CGANMEREVSTSAAAVISLPSVEV 185
           + + T  GIG     +L  Y+++ T CW+F+ A G CG    REV+ + +AV++LP+VEV
Sbjct: 133 DTILTHSGIGVHYGGVLLPYVEMITRCWKFVAAMGGCGEKEGREVAAAPSAVVALPTVEV 192

Query: 186 CGGGMSTSECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKRNTCPCCRFQLPTDDVF 365
            G    T EC IC EEM +GRDVC+LPCQH FHW+C+LPWLKKRNTCPCCRFQLPT+DV 
Sbjct: 193 TGD--VTGECAICREEMREGRDVCELPCQHLFHWMCILPWLKKRNTCPCCRFQLPTEDVL 250

Query: 366 GEIERLWGILAKKGRGN 416
           GEI+RLW +L K G G+
Sbjct: 251 GEIKRLWSVLMKAGGGS 267


>ref|XP_004137953.1| PREDICTED: uncharacterized protein LOC101209757 [Cucumis sativus]
           gi|449529876|ref|XP_004171924.1| PREDICTED:
           uncharacterized protein LOC101225495 [Cucumis sativus]
          Length = 283

 Score =  173 bits (439), Expect = 1e-41
 Identities = 78/134 (58%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
 Frame = +3

Query: 9   NNMFTLWGIGASSATILSKYIDIATGCWRFLDATG-CGANMEREVSTSAAAVISLPSVEV 185
           +++ T+ G+       L  YID    CW+F+   G CG  + REV+ S  AV+ LPSV V
Sbjct: 142 DSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPMAVVELPSVAV 201

Query: 186 CGGGMSTSECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKRNTCPCCRFQLPTDDVF 365
            GGG +  ECVIC EEM +GRD C+LPC H FHWLC+LPWL+KRNTCPCCRFQLPTDDV 
Sbjct: 202 GGGGAAV-ECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCRFQLPTDDVL 260

Query: 366 GEIERLWGILAKKG 407
           GEI+RLW IL K G
Sbjct: 261 GEIQRLWEILFKVG 274


>ref|XP_002308497.1| predicted protein [Populus trichocarpa] gi|222854473|gb|EEE92020.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  167 bits (422), Expect = 1e-39
 Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
 Frame = +3

Query: 33  IGASSATILSKYIDIATGCWRFLDA-TGCGANMEREVSTSAAAVISLPSVEVCGGGMSTS 209
           +G     +L  Y+++   CWRF+    GC     REV+ + AAV++LP+VEV GGG    
Sbjct: 145 VGVHYGGVLLPYVEMVIRCWRFVGVMAGCAVKEGREVAAAPAAVVALPAVEVRGGG---G 201

Query: 210 ECVICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKRNTCPCCRFQLPTDDVFGEIERLWG 389
           ECVIC E+M+ GRDVC+LPC+H FHW+C+LPWLKK NTCPCCRFQLPT+DVF EIERLW 
Sbjct: 202 ECVICREKMSGGRDVCELPCEHLFHWMCILPWLKKTNTCPCCRFQLPTEDVFCEIERLWS 261

Query: 390 ILAKKGRGNL 419
            L K G G L
Sbjct: 262 ALIKIGDGAL 271


>ref|XP_002322843.1| predicted protein [Populus trichocarpa] gi|222867473|gb|EEF04604.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score =  164 bits (414), Expect = 9e-39
 Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
 Frame = +3

Query: 87  CWRFLDA-TGCGANMEREVSTSAAAVISLPSVEVCGGGMSTSECVICMEEMNQGRDVCQL 263
           CWRF+    GC     RE++ + A V++LP+VEV GGG    ECVIC EEM +GRDVC+L
Sbjct: 5   CWRFVGMMAGCTVREGRELAAAPATVVALPAVEVRGGG---EECVICREEMREGRDVCEL 61

Query: 264 PCQHTFHWLCVLPWLKKRNTCPCCRFQLPTDDVFGEIERLWGILAKKGRGNL 419
           PC+H FHW+C+LPWLKK NTCPCCRFQLPT+DVFGEIERLW ++ K G G L
Sbjct: 62  PCEHLFHWMCILPWLKKTNTCPCCRFQLPTEDVFGEIERLWSVMIKIGNGAL 113


>ref|XP_003537233.1| PREDICTED: uncharacterized protein LOC100810879 [Glycine max]
          Length = 264

 Score =  160 bits (406), Expect = 8e-38
 Identities = 72/122 (59%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
 Frame = +3

Query: 39  ASSATILSKYIDIATGCWRFLDATGCGANMER-EVSTSAAAVISLPSVEVCGGGMSTSEC 215
           A   T++  +++  + CWR + A  CG   E  EV+ SAA V++LPSVEV   G    EC
Sbjct: 140 APLGTVMIPFVETVSRCWRLVGALDCGGGKEAAEVAASAATVVALPSVEVRHDGR---EC 196

Query: 216 VICMEEMNQGRDVCQLPCQHTFHWLCVLPWLKKRNTCPCCRFQLPTDDVFGEIERLWGIL 395
           VIC EEM  GRDVC+LPCQH FHW+C+LPWL KRNTCPCCRF+LP+DDVFGEI+RLW +L
Sbjct: 197 VICKEEMGIGRDVCELPCQHLFHWMCILPWLGKRNTCPCCRFRLPSDDVFGEIQRLWEVL 256

Query: 396 AK 401
            K
Sbjct: 257 LK 258


Top