BLASTX nr result
ID: Coptis25_contig00023790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023790
(1658 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517711.1| GTP binding protein, putative [Ricinus commu... 462 e-127
ref|XP_002864570.1| predicted protein [Arabidopsis lyrata subsp.... 428 e-117
ref|XP_003537334.1| PREDICTED: uncharacterized protein LOC100801... 427 e-117
ref|NP_974959.1| putative GTP-binding protein CGPA [Arabidopsis ... 423 e-116
ref|NP_568876.1| putative GTP-binding protein CGPA [Arabidopsis ... 423 e-116
>ref|XP_002517711.1| GTP binding protein, putative [Ricinus communis]
gi|223543109|gb|EEF44643.1| GTP binding protein, putative
[Ricinus communis]
Length = 489
Score = 462 bits (1188), Expect = e-127
Identities = 243/349 (69%), Positives = 275/349 (78%)
Frame = +3
Query: 612 DEVSDSKLKSRPKTNDRRVIVKQDDVTDGLQKTYSRKKIDSNRQADQKPSNRHGVEPPGN 791
DE ++L S RR +K+ D+ DG + + +K+ S + P P
Sbjct: 98 DETDSTELSS----GKRRTKMKKADILDGHKNSLLKKQSKSKSDLSKHPD-----VPLSR 148
Query: 792 SMKKMLRSKKDAVKNSEWEDGPPXXXXXXVMRIDPQDISNKRLDDSIPISGTTVEKEVDP 971
KKM R++K V D P ++R+DP DISNKRLD+ + + EKE +
Sbjct: 149 FAKKMARNEKSLVAGDSEVDERPKKKKR-IIRLDPHDISNKRLDEGVVTNENPKEKEKEV 207
Query: 972 DKENEISKNAQFRAIQPSPSILSFVEDNLLGRRRSIELRRAGYNIDLSAPLDNIPLSTSS 1151
++ E+SKNAQFRAI+PSPSILSFVEDNLLGRRR IEL+RAGYNI+LSAPLDNIPLSTSS
Sbjct: 208 EEVGEMSKNAQFRAIKPSPSILSFVEDNLLGRRRLIELKRAGYNIELSAPLDNIPLSTSS 267
Query: 1152 ERERIEEAVFRNKLEFFAAAKISSSFPPAELPEIAFAGRSNVGKSSLLNALTRQWGVVRT 1331
ERERIEE +FRNKL FFAAAK+SSSFPP +LPEIAFAGRSNVGKSSLLNALTRQWGV RT
Sbjct: 268 ERERIEENIFRNKLTFFAAAKVSSSFPPPDLPEIAFAGRSNVGKSSLLNALTRQWGVART 327
Query: 1332 SDKPGLTQTINFFKLGPKLSMVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVGLKRVCLL 1511
SDKPGLTQTINFF LGPKL +VDLPGYGFAYAKEEVKDAWE+LVKEYVSTRVGLKRVCLL
Sbjct: 328 SDKPGLTQTINFFSLGPKLCLVDLPGYGFAYAKEEVKDAWEDLVKEYVSTRVGLKRVCLL 387
Query: 1512 IDTKWGMKPRDHELINLMERSQTKYQIVLTKSDLVFPIDVARRAMQIEE 1658
IDTKWGMKPRDHELINLMERSQTKYQIVLTK+D+VFPIDVARRAMQIEE
Sbjct: 388 IDTKWGMKPRDHELINLMERSQTKYQIVLTKTDVVFPIDVARRAMQIEE 436
>ref|XP_002864570.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310405|gb|EFH40829.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 467
Score = 428 bits (1100), Expect = e-117
Identities = 231/362 (63%), Positives = 276/362 (76%), Gaps = 2/362 (0%)
Frame = +3
Query: 579 RDRWISTKRREDEVSDSKLKSRPKTNDRRVIVKQDDVTDGLQKTYSRKKIDSNRQADQKP 758
R W ++KR + S K + T+ + K V D +K+Y RK+ D + AD
Sbjct: 74 RTMWAASKRNQRSTSSFKTSTDAATSVFKT--KSPRVDDATRKSY-RKRDDLDNNADV-- 128
Query: 759 SNRHGVEPPGNSMKKMLRSKKDAVKN-SEWEDGPPXXXXXXVMRIDPQDISNKRLDDSIP 935
S R ++ P +K S+K V + S+ ++ P +R+DP D SNKR+DD +
Sbjct: 129 SRRKSLDVPSFKARKQAFSEKRVVGDGSDIQEDKPRKRKR--IRLDPYDTSNKRIDDDVV 186
Query: 936 IS-GTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNLLGRRRSIELRRAGYNIDL 1112
+ G V+ D K E+SKNAQFRAIQPS SILS+VE+NLLGRRR IEL++AGYN +L
Sbjct: 187 LDEGLRVKNIKDAVKSVEMSKNAQFRAIQPSHSILSYVEENLLGRRRLIELKKAGYNTEL 246
Query: 1113 SAPLDNIPLSTSSERERIEEAVFRNKLEFFAAAKISSSFPPAELPEIAFAGRSNVGKSSL 1292
APLDNIP STS+ERERIEE+VFRNKLEFFAAA +SSSFPP ++PEIAFAGRSNVGKSSL
Sbjct: 247 PAPLDNIPQSTSTERERIEESVFRNKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSL 306
Query: 1293 LNALTRQWGVVRTSDKPGLTQTINFFKLGPKLSMVDLPGYGFAYAKEEVKDAWEELVKEY 1472
LNALTRQWGVVRTSDKPGLTQTINFF LGPK+ +VDLPGYGFA+AK+EVK+AWE+LVKEY
Sbjct: 307 LNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEY 366
Query: 1473 VSTRVGLKRVCLLIDTKWGMKPRDHELINLMERSQTKYQIVLTKSDLVFPIDVARRAMQI 1652
VSTR LKRVCLL+DTKWGMKPRD ELINLMERS TKYQIVLTK+D+VFP+DVARRAMQI
Sbjct: 367 VSTRTSLKRVCLLVDTKWGMKPRDQELINLMERSNTKYQIVLTKTDVVFPMDVARRAMQI 426
Query: 1653 EE 1658
EE
Sbjct: 427 EE 428
>ref|XP_003537334.1| PREDICTED: uncharacterized protein LOC100801850 [Glycine max]
Length = 535
Score = 427 bits (1097), Expect = e-117
Identities = 268/519 (51%), Positives = 328/519 (63%), Gaps = 19/519 (3%)
Frame = +3
Query: 159 LPRKDGFRKKSGVN------DDVSDFDRLNRLKFSSGKGGNVRKGEFNEEKGRKKDGESW 320
+P +D RKK N +F R + + S K G +G NE +G+ K ++
Sbjct: 1 MPSEDSLRKKLRKNATKPVVSTSRNFIRAKKDENSFEKNGAFGRG--NESEGKLKKRGNF 58
Query: 321 RGYKGKTGVKVEGK-RFSGRVGKEEGVASNLRSRTETRDRWVSSKRSEEVGFDGKPNFEG 497
+G + V GK R GK++ + + + D+ V + EV G
Sbjct: 59 KGMRSGEEVLERGKLRTLDSGGKKKRIYAK-----KGGDKNVKLENGMEVSKKRTLIRNG 113
Query: 498 KRYSGRGKERXXXXXXXXXXXXXXXXTRDRWISTKR-------REDEVSDSKLKSRPKTN 656
++ R K+ TR+ KR R+++V + K + K
Sbjct: 114 EK---RVKDVPVEGNDGHHTMWDHDKTRNGGFKVKRSTQMRKERKEDVVLAIAKQKGKAE 170
Query: 657 DRRVI--VKQDDVTDGLQKTYSRKKIDSNRQADQKPSNRHGVEPPGNSMKKMLRSKKDAV 830
D I V +D G K KK + ++ +Q+ + G+S K + +
Sbjct: 171 DAGKIGLVGTEDQGSGSVKRSRDKKTELSKGKNQEVVS-------GSSFAKKKARDRTGL 223
Query: 831 KNSEWE---DGPPXXXXXXVMRIDPQDISNKRLDDSIPISGTTVEKEVDPDKENEISKNA 1001
+ + E D P V++IDP DISNKRLDD G EKE + +KE ++SKNA
Sbjct: 224 DDDDAEMLHDRPKKKKR--VIKIDPHDISNKRLDD-----GIGKEKEKESEKEPKMSKNA 276
Query: 1002 QFRAIQPSPSILSFVEDNLLGRRRSIELRRAGYNIDLSAPLDNIPLSTSSERERIEEAVF 1181
QFRAIQPSP ILSFVE NLLGRRR I+L+RAGYNIDLSAPLDNIP S+SSERE+IEE +F
Sbjct: 277 QFRAIQPSPLILSFVEKNLLGRRRMIDLKRAGYNIDLSAPLDNIPFSSSSEREKIEENIF 336
Query: 1182 RNKLEFFAAAKISSSFPPAELPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTI 1361
RNKL+FFAAAK+SSSFPP LPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTI
Sbjct: 337 RNKLDFFAAAKVSSSFPPPNLPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTI 396
Query: 1362 NFFKLGPKLSMVDLPGYGFAYAKEEVKDAWEELVKEYVSTRVGLKRVCLLIDTKWGMKPR 1541
NFF LG K +VDLPGYGFAYAKEEVK++WEELVKEYVSTRVGL+RVCLLIDTKWGMKPR
Sbjct: 397 NFFNLGTKHCLVDLPGYGFAYAKEEVKESWEELVKEYVSTRVGLRRVCLLIDTKWGMKPR 456
Query: 1542 DHELINLMERSQTKYQIVLTKSDLVFPIDVARRAMQIEE 1658
D ELI LMERS+TKYQIVLTK+D+VFPIDVARRAMQIEE
Sbjct: 457 DLELIELMERSKTKYQIVLTKTDVVFPIDVARRAMQIEE 495
>ref|NP_974959.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
gi|222423373|dbj|BAH19659.1| AT5G58370 [Arabidopsis
thaliana] gi|332009661|gb|AED97044.1| putative
GTP-binding protein CGPA [Arabidopsis thaliana]
Length = 465
Score = 423 bits (1088), Expect = e-116
Identities = 230/362 (63%), Positives = 272/362 (75%), Gaps = 2/362 (0%)
Frame = +3
Query: 579 RDRWISTKRREDEVSDSKLKSRPKTNDRRVIVKQDDVTDGLQKTY-SRKKIDSNRQADQK 755
R W+++KR + S K + T+ + K D +K+Y R ++DSN D
Sbjct: 72 RTMWVASKRNQGSTSSFKTANDAATSVFKT--KSRSGVDVTRKSYRKRDELDSN--VDVS 127
Query: 756 PSNRHGVEPPGNSMKKMLRSKKDAVKNSEWEDGPPXXXXXXVMRIDPQDISNKRL-DDSI 932
P V P + K++ K+ S+ ++ P +R+DP D SNKR+ DD +
Sbjct: 128 PRESSDV-PSFKARKQVFSEKRVVGDGSDVQEDKPRKRKR--IRLDPYDTSNKRIVDDVL 184
Query: 933 PISGTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNLLGRRRSIELRRAGYNIDL 1112
G V+ D K E+SKNAQFRAIQPS SILS+VE+NLLGRRR IEL+RAGYN +L
Sbjct: 185 LDDGLRVKNIKDAVKSVEMSKNAQFRAIQPSHSILSYVEENLLGRRRLIELKRAGYNTEL 244
Query: 1113 SAPLDNIPLSTSSERERIEEAVFRNKLEFFAAAKISSSFPPAELPEIAFAGRSNVGKSSL 1292
APLDNIP STS+ERERIEE+VFRNKLEFFAAA +SSSFPP ++PEIAFAGRSNVGKSSL
Sbjct: 245 PAPLDNIPQSTSTERERIEESVFRNKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSL 304
Query: 1293 LNALTRQWGVVRTSDKPGLTQTINFFKLGPKLSMVDLPGYGFAYAKEEVKDAWEELVKEY 1472
LNALTRQWGVVRTSDKPGLTQTINFF LGPK+ +VDLPGYGFA+AK+EVK+AWE+LVKEY
Sbjct: 305 LNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEY 364
Query: 1473 VSTRVGLKRVCLLIDTKWGMKPRDHELINLMERSQTKYQIVLTKSDLVFPIDVARRAMQI 1652
VSTR LKRVCLL+DTKWGMKPRD ELINLMERS TKYQIVLTK+D+VFPIDVARRAMQI
Sbjct: 365 VSTRTSLKRVCLLVDTKWGMKPRDQELINLMERSNTKYQIVLTKTDVVFPIDVARRAMQI 424
Query: 1653 EE 1658
EE
Sbjct: 425 EE 426
>ref|NP_568876.1| putative GTP-binding protein CGPA [Arabidopsis thaliana]
gi|14334980|gb|AAK59667.1| putative GTP-binding protein
CGPA [Arabidopsis thaliana] gi|17104637|gb|AAL34207.1|
putative GTP-binding protein CGPA [Arabidopsis thaliana]
gi|332009660|gb|AED97043.1| putative GTP-binding protein
CGPA [Arabidopsis thaliana]
Length = 446
Score = 423 bits (1088), Expect = e-116
Identities = 230/362 (63%), Positives = 272/362 (75%), Gaps = 2/362 (0%)
Frame = +3
Query: 579 RDRWISTKRREDEVSDSKLKSRPKTNDRRVIVKQDDVTDGLQKTY-SRKKIDSNRQADQK 755
R W+++KR + S K + T+ + K D +K+Y R ++DSN D
Sbjct: 72 RTMWVASKRNQGSTSSFKTANDAATSVFKT--KSRSGVDVTRKSYRKRDELDSN--VDVS 127
Query: 756 PSNRHGVEPPGNSMKKMLRSKKDAVKNSEWEDGPPXXXXXXVMRIDPQDISNKRL-DDSI 932
P V P + K++ K+ S+ ++ P +R+DP D SNKR+ DD +
Sbjct: 128 PRESSDV-PSFKARKQVFSEKRVVGDGSDVQEDKPRKRKR--IRLDPYDTSNKRIVDDVL 184
Query: 933 PISGTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNLLGRRRSIELRRAGYNIDL 1112
G V+ D K E+SKNAQFRAIQPS SILS+VE+NLLGRRR IEL+RAGYN +L
Sbjct: 185 LDDGLRVKNIKDAVKSVEMSKNAQFRAIQPSHSILSYVEENLLGRRRLIELKRAGYNTEL 244
Query: 1113 SAPLDNIPLSTSSERERIEEAVFRNKLEFFAAAKISSSFPPAELPEIAFAGRSNVGKSSL 1292
APLDNIP STS+ERERIEE+VFRNKLEFFAAA +SSSFPP ++PEIAFAGRSNVGKSSL
Sbjct: 245 PAPLDNIPQSTSTERERIEESVFRNKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSL 304
Query: 1293 LNALTRQWGVVRTSDKPGLTQTINFFKLGPKLSMVDLPGYGFAYAKEEVKDAWEELVKEY 1472
LNALTRQWGVVRTSDKPGLTQTINFF LGPK+ +VDLPGYGFA+AK+EVK+AWE+LVKEY
Sbjct: 305 LNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEY 364
Query: 1473 VSTRVGLKRVCLLIDTKWGMKPRDHELINLMERSQTKYQIVLTKSDLVFPIDVARRAMQI 1652
VSTR LKRVCLL+DTKWGMKPRD ELINLMERS TKYQIVLTK+D+VFPIDVARRAMQI
Sbjct: 365 VSTRTSLKRVCLLVDTKWGMKPRDQELINLMERSNTKYQIVLTKTDVVFPIDVARRAMQI 424
Query: 1653 EE 1658
EE
Sbjct: 425 EE 426