BLASTX nr result

ID: Coptis25_contig00023789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023789
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cuc...    75   4e-12
ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212...    75   4e-12
ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial...    74   9e-12
ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
gb|ADE77049.1| unknown [Picea sitchensis]                              71   1e-10

>ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cucumis sativus]
          Length = 323

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -3

Query: 386 GAGIVFSEMFKDKVDKQWKYTYLIVEIKSPSNAQLILESYLP 261
           GAG V++EMFKD+VDKQWK+TYLIVE+KSPS AQLILESY+P
Sbjct: 281 GAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLILESYMP 322


>ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212713 [Cucumis sativus]
          Length = 323

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -3

Query: 386 GAGIVFSEMFKDKVDKQWKYTYLIVEIKSPSNAQLILESYLP 261
           GAG V++EMFKD+VDKQWK+TYLIVE+KSPS AQLILESY+P
Sbjct: 281 GAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLILESYMP 322


>ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera]
           gi|296088479|emb|CBI37470.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -3

Query: 386 GAGIVFSEMFKDKVDKQWKYTYLIVEIKSPSNAQLILESYLP 261
           GAG V++EMFKDKVDKQWK+TYLI EIKSPS AQL+LESY+P
Sbjct: 272 GAGKVYTEMFKDKVDKQWKFTYLIAEIKSPSPAQLMLESYVP 313


>ref|XP_002302508.1| predicted protein [Populus trichocarpa] gi|222844234|gb|EEE81781.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = -3

Query: 386 GAGIVFSEMFKDKVDKQWKYTYLIVEIKSPSNAQLILESYLP 261
           GAG V +EMFKDKVDKQWKYTYLIVE+  PS +QLILESY+P
Sbjct: 192 GAGKVSAEMFKDKVDKQWKYTYLIVEVMQPSRSQLILESYMP 233


>gb|ADE77049.1| unknown [Picea sitchensis]
          Length = 252

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = -3

Query: 386 GAGIVFSEMFKDKVDKQWKYTYLIVEIKSPSNAQLILESYLP 261
           GAG V+SEMFKDK DK+WK+TYLIV++ SPS AQL+LESY+P
Sbjct: 210 GAGKVYSEMFKDKTDKKWKFTYLIVDVTSPSKAQLMLESYVP 251


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