BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023784
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...   132   1e-28
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   124   3e-26
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...   118   2e-24
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   117   3e-24

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score =  132 bits (332), Expect = 1e-28
 Identities = 87/284 (30%), Positives = 144/284 (50%), Gaps = 5/284 (1%)
 Frame = +2

Query: 2    WNPQTCRMSLIEKDAQSITMDVSLMSGK-NFVISVVYGSNNRE-RTALWRNLIQLSYTIQ 175
            WN  T ++ +     Q+I + V++++   +F  S++YG NN   R ALW +++  S   +
Sbjct: 450  WNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWE 509

Query: 176  KP-WIILGDFNSVLSPQERVGGTETRPHHYSDLLQCVPMSGLMDLKQTGNFLTWNNK-QE 349
               WI++GDFN++ +  +R+GG+ T       L  C+  + + DL+ +G   TW+N+  E
Sbjct: 510  STLWILIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPE 569

Query: 350  QRAWRKLDRVMVNVEWVSEFTDTEAHYKSPGEISDHLSIVVASTRSTGRYKKSFRFFNYW 529
                RKLDRV+VN +W  +F  +EA +  P  +SDH  +VV    +    KK FRFF+ W
Sbjct: 570  NLIMRKLDRVLVNEKWNLKFPLSEARFL-PSGMSDHSPMVVKVIGNDQNKKKPFRFFDMW 628

Query: 530  IQKEGFREVIQGAWDIHVVGNPMFTFMKKLKHAKDALIKWN-GERGRITSXXXXXXXXXX 706
            +  + F  +++  WD +  G PM+    KL+  K  L  +N      I+           
Sbjct: 629  MDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRVRDAKNKMD 688

Query: 707  XIQGRLQTQPLSHEYSIQEKVLTARYVKAAVAEESECKQKSRDQ 838
              Q  L T   +    ++E+ +  +Y     AEES  KQK+R Q
Sbjct: 689  KAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQ 732


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  127 bits (320), Expect = 2e-27
 Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 5/275 (1%)
 Frame = +2

Query: 2   WNPQTCRMSLIEKDAQSITMDVSLMSGK-NFVISVVYGSNNRE-RTALWRNLIQLSYTIQ 175
           WN  T ++ +     Q+I + V++++   +F  S++YG NN   R ALW +++  S   +
Sbjct: 73  WNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWE 132

Query: 176 K-PWIILGDFNSVLSPQERVGGTETRPHHYSDLLQCVPMSGLMDLKQTGNFLTWNNK-QE 349
             PWI++GDFN++ +  +++GG+ T       L  C+  + + DL  +G   TW+N+  E
Sbjct: 133 STPWILMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCIREAKVDDLWYSGMHYTWSNQCPE 192

Query: 350 QRAWRKLDRVMVNVEWVSEFTDTEAHYKSPGEISDHLSIVVASTRSTGRYKKSFRFFNYW 529
               RKLDRV+VN +W   F  +EA +  P  +SDH  +VV    +    KK FRFF+ W
Sbjct: 193 NLIMRKLDRVLVNEKWNLNFPLSEARFL-PSGMSDHSPMVVKVIGNDQNIKKPFRFFDMW 251

Query: 530 IQKEGFREVIQGAWDIHVVGNPMFTFMKKLKHAKDALIKWN-GERGRITSXXXXXXXXXX 706
           +  + F  +++  WD +  G PM+    KL+  K  L  +N      I+           
Sbjct: 252 MDHDEFMPLVKKVWDQNSGGCPMYQLCCKLRKQKQELKLFNMAHFSNISDRVKDAKNEMD 311

Query: 707 XIQGRLQTQPLSHEYSIQEKVLTARYVKAAVAEES 811
             Q  L T   +    +QE+ +  +Y     AEES
Sbjct: 312 KAQQALHTAHKNPTLCMQERDVVHKYASTVRAEES 346


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
            predicted protein [Populus trichocarpa]
          Length = 809

 Score =  124 bits (311), Expect = 3e-26
 Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 4/214 (1%)
 Frame = +2

Query: 2    WNPQTCRMSLIEKDAQSITMDVSLMSGK-NFVISVVYGSNNRE-RTALWRNLIQLSYTIQ 175
            WN  T ++ +     Q+I + V++++   +F  S++YG NN   R ALW +++  S   +
Sbjct: 597  WNADTVKVDVYGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWE 656

Query: 176  K-PWIILGDFNSVLSPQERVGGTETRPHHYSDLLQCVPMSGLMDLKQTGNFLTWNNK-QE 349
              PWI++GDFN++ +  +R+GG+ T       L  C+  + + DL+ +G   TW+N+  E
Sbjct: 657  STPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPE 716

Query: 350  QRAWRKLDRVMVNVEWVSEFTDTEAHYKSPGEISDHLSIVVASTRSTGRYKKSFRFFNYW 529
                RKLDRV+VN +W  +F  +EA +  P  +SDH  +VV    +    KK FRFF+ W
Sbjct: 717  NLIMRKLDRVLVNEKWNLKFPLSEARF-LPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMW 775

Query: 530  IQKEGFREVIQGAWDIHVVGNPMFTFMKKLKHAK 631
            +  + F  +++  WD +  G PM+    KL+  K
Sbjct: 776  MDHDEFMPLVKKVWDQNSGGCPMYQLCCKLRKLK 809


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24
 Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 5/284 (1%)
 Frame = +2

Query: 2   WNPQTCRMSLIEKDAQSITMDVSLMSGK-NFVISVVYGSNNRE-RTALWRNLIQLSYTIQ 175
           WN  T ++++     Q+I + V++++   +F  S++YG NN   R ALW +++  S   +
Sbjct: 57  WNADTVKVNVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWE 116

Query: 176 K-PWIILGDFNSVLSPQERVGGTETRPHHYSDLLQCVPMSGLMDLKQTGNFLTWNNK-QE 349
             PWI++GDFN++ +   R+GG+ T       L  C+  + + DL+ +G   TW+N+  E
Sbjct: 117 STPWILMGDFNAIRNQSHRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPE 176

Query: 350 QRAWRKLDRVMVNVEWVSEFTDTEAHYKSPGEISDHLSIVVASTRSTGRYKKSFRFFNYW 529
               RKLDRV+VN +W   F  +E  +  P  ISDH  +VV    +    KK FRFF+ W
Sbjct: 177 NLIMRKLDRVLVNEKWNLNFPLSEVRF-LPSGISDHSPMVVKVIGNDQNIKKPFRFFDMW 235

Query: 530 IQKEGFREVIQGAWDIHVVGNPMFTFMKKLKHAKDALIKWN-GERGRITSXXXXXXXXXX 706
           +             D +  G PM+     LK  K  L  +N      I+           
Sbjct: 236 M-------------DQNSGGCPMYQLCCNLKKLKQELKLFNMAHFSNISDRVKDAKNEMD 282

Query: 707 XIQGRLQTQPLSHEYSIQEKVLTARYVKAAVAEESECKQKSRDQ 838
             Q  L T   +    ++E+ +  +Y     AEES  KQK+R Q
Sbjct: 283 KAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQ 326


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  117 bits (293), Expect = 3e-24
 Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 7/283 (2%)
 Frame = +2

Query: 2   WNPQTCRMSLIEKDAQSITMDVSLMSGKN-FVISVVYGSNNR-ERTALWRNLIQLSYT-- 169
           W+P   ++ +I +  Q IT ++ L    + FV+S+VY SN    R  LW  L+QL+ +  
Sbjct: 75  WDPSV-KVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELWNELVQLALSPV 133

Query: 170 -IQKPWIILGDFNSVLSPQERVGGTETRPHHYSDLLQCVPMSGLMDLKQTGNFLTWNNKQ 346
            + + WI+LGDFN +L+P+  +     R         C+  S L DL   G+  TW NK 
Sbjct: 134 VVGRSWIVLGDFNQILNPESAINANIGRK--IRAFRSCLLDSDLYDLVYKGSSYTWWNKC 191

Query: 347 EQRAW-RKLDRVMVNVEWVSEFTDTEAHYKSPGEISDHLSIVVASTRSTGRYKKSFRFFN 523
             R   +K+DR++VN  W + F    A++  P + SDH S  V    +  + K+ FRFFN
Sbjct: 192 SSRPLAKKIDRILVNDHWNTLFPSAYANFGEP-DFSDHSSCEVVLDPAVLKAKRPFRFFN 250

Query: 524 YWIQKEGFREVIQGAW-DIHVVGNPMFTFMKKLKHAKDALIKWNGERGRITSXXXXXXXX 700
           Y++    F ++I+  W   +V G+ M+   KKLKH K  +  ++ E              
Sbjct: 251 YFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEAHA 310

Query: 701 XXXIQGRLQTQPLSHEYSIQEKVLTARYVKAAVAEESECKQKS 829
               + R+     S  ++  E   T ++   A AEES   QKS
Sbjct: 311 IVLHRQRITLTNPSVVHATLELEATRKWQILAKAEESFFCQKS 353