BLASTX nr result
ID: Coptis25_contig00023776
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023776
(1269 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256... 285 2e-74
emb|CBI16878.3| unnamed protein product [Vitis vinifera] 285 2e-74
ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2... 265 1e-68
gb|ABK94444.1| unknown [Populus trichocarpa] 265 2e-68
ref|XP_002531481.1| ubiquitin-protein ligase, putative [Ricinus ... 237 5e-60
>ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
Length = 503
Score = 285 bits (729), Expect = 2e-74
Identities = 168/391 (42%), Positives = 220/391 (56%), Gaps = 14/391 (3%)
Frame = -2
Query: 1268 LDSHLLSENLSPMGTNVTYHNRGKSAACRTSK-----RGCRLSSKKCSIEQSLSGLREIQ 1104
L+ L+SE +P+ + + +AC SK +G + I+ L +
Sbjct: 123 LEVPLVSEKANPLTKKNGRAHSVRGSACDISKELWVDKGWGGADDAVWIDSFLLN----E 178
Query: 1103 HGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFS 924
H E S S S R +R+ + I + ++ P+RK RRLVKKNA R +LES + D D+E +
Sbjct: 179 HEESSFRSHRHSVRQKRSNCNYIYSSTSSEPSRKGRRLVKKNASRDMLESLLSDSDKECN 238
Query: 923 PLNDIVDVSNDQNTPRT-----ENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNN 759
+ SN P + +I + + + I +N+
Sbjct: 239 LITARNRRSNLGPPPNCSDGVRDESTSTIRRLTSDDGFYDHGSHRDGTLEDVEEIRDLNH 298
Query: 758 VHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRV----PASVALS 591
A D + E ++ V + Q D EDN ++SE++ R+ P S LS
Sbjct: 299 SLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEIKDGDRIRQMIPTSANLS 352
Query: 590 CVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATS 411
CVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR +TCPLCKA F SITKVD A
Sbjct: 353 CVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRRKTATCPLCKASFVSITKVDDAAY 412
Query: 410 SDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLN 231
SDQKIYSQTIPY S +DI +L D E +F AQ + PVCCEC REPEDLL+ CHLC
Sbjct: 413 SDQKIYSQTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRI 472
Query: 230 RLVHSYCLDPPLIPWTCNNCRDLRILYQRFH 138
R VHSYCLDPPL+PWTC +C+DLR+LY FH
Sbjct: 473 RCVHSYCLDPPLLPWTCIHCKDLRMLYHHFH 503
>emb|CBI16878.3| unnamed protein product [Vitis vinifera]
Length = 475
Score = 285 bits (729), Expect = 2e-74
Identities = 168/391 (42%), Positives = 220/391 (56%), Gaps = 14/391 (3%)
Frame = -2
Query: 1268 LDSHLLSENLSPMGTNVTYHNRGKSAACRTSK-----RGCRLSSKKCSIEQSLSGLREIQ 1104
L+ L+SE +P+ + + +AC SK +G + I+ L +
Sbjct: 95 LEVPLVSEKANPLTKKNGRAHSVRGSACDISKELWVDKGWGGADDAVWIDSFLLN----E 150
Query: 1103 HGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFS 924
H E S S S R +R+ + I + ++ P+RK RRLVKKNA R +LES + D D+E +
Sbjct: 151 HEESSFRSHRHSVRQKRSNCNYIYSSTSSEPSRKGRRLVKKNASRDMLESLLSDSDKECN 210
Query: 923 PLNDIVDVSNDQNTPRT-----ENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNN 759
+ SN P + +I + + + I +N+
Sbjct: 211 LITARNRRSNLGPPPNCSDGVRDESTSTIRRLTSDDGFYDHGSHRDGTLEDVEEIRDLNH 270
Query: 758 VHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRV----PASVALS 591
A D + E ++ V + Q D EDN ++SE++ R+ P S LS
Sbjct: 271 SLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEIKDGDRIRQMIPTSANLS 324
Query: 590 CVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATS 411
CVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR +TCPLCKA F SITKVD A
Sbjct: 325 CVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRRKTATCPLCKASFVSITKVDDAAY 384
Query: 410 SDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLN 231
SDQKIYSQTIPY S +DI +L D E +F AQ + PVCCEC REPEDLL+ CHLC
Sbjct: 385 SDQKIYSQTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRI 444
Query: 230 RLVHSYCLDPPLIPWTCNNCRDLRILYQRFH 138
R VHSYCLDPPL+PWTC +C+DLR+LY FH
Sbjct: 445 RCVHSYCLDPPLLPWTCIHCKDLRMLYHHFH 475
>ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1|
predicted protein [Populus trichocarpa]
Length = 422
Score = 265 bits (678), Expect = 1e-68
Identities = 148/342 (43%), Positives = 192/342 (56%), Gaps = 5/342 (1%)
Frame = -2
Query: 1160 LSSKKCSIEQSLSGLREIQHGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKK 981
L+ K+ S +H E + R RN +S+ + + A P+RK RRL+KK
Sbjct: 106 LNKKRKPFVHGGSSYNSSRHEESDIVPNMHFVRGRRNTFSNTGSTL-AEPSRKGRRLMKK 164
Query: 980 NACRGILESSIMDLDQEFSPLNDIVDVSNDQNTPRTENENISIPQGRIVEAKFXXXXXXX 801
N R LE+ + D DQE+ P V ++ + N+ T + I EA+
Sbjct: 165 NIARDNLETLLSDSDQEWHP----VRLNKNNNSKSTAKRTGCKRKLDIFEAEV------- 213
Query: 800 XXXXXXXXITQMNNVHADDDLIVRNEGVAPVDDVPLQHG-----LSDSEDNYDRTQEVDS 636
D ++ N G A ++ G L SE + +++D
Sbjct: 214 ----------------TSDVAVINNRGSAVESLDEIEEGTHWNHLPVSEYSNSCPEDMD- 256
Query: 635 ELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLC 456
+ + R+PA LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR STCPLC
Sbjct: 257 QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLC 316
Query: 455 KAIFSSITKVDSATSSDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLS 276
KA FS ITKV+ A +SDQKIYSQTIP+ SS D++ E F A+P+ VCCEC S
Sbjct: 317 KAGFSIITKVEDAATSDQKIYSQTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRS 376
Query: 275 REPEDLLICCHLCLNRLVHSYCLDPPLIPWTCNNCRDLRILY 150
REPEDLLI CHLC R +HSYCLDPPL PW C +C+DL++LY
Sbjct: 377 REPEDLLIRCHLCETRCIHSYCLDPPLSPWICTHCKDLQMLY 418
>gb|ABK94444.1| unknown [Populus trichocarpa]
Length = 482
Score = 265 bits (677), Expect = 2e-68
Identities = 146/336 (43%), Positives = 193/336 (57%), Gaps = 13/336 (3%)
Frame = -2
Query: 1118 LREIQHGEPSTYSSTFS----------TRHERNAYSSIENPITAGPTRKSRRLVKKNACR 969
L +++HG S SS R RN +S+ + + A P+RK RRL+KKN R
Sbjct: 146 LNDVKHGGSSYNSSRHEESDIVPNMHFVRGRRNTFSNTGSTL-AEPSRKGRRLMKKNIAR 204
Query: 968 GILESSIMDLDQEFSPLNDIVDVSNDQNTPRTE-NENISIPQGRIVE--AKFXXXXXXXX 798
LE+ + D DQE+ P+ + ++ RT + I + + A
Sbjct: 205 DNLETLLSDSDQEWHPVRLNKNNNSKSTAKRTGCKRKLDIFEAEVTSDVAVINNRGSAVE 264
Query: 797 XXXXXXXITQMNNVHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTT 618
T N++ + EG ++ G S +E+ + +++D + +
Sbjct: 265 SLDEIEEGTHWNHLPVSEYSNSFPEGALTASEIADSSG-SAAENLNAKVKDMD-QFESVA 322
Query: 617 RVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSS 438
R+PA LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR STCPLCKA FS
Sbjct: 323 RLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLCKAGFSI 382
Query: 437 ITKVDSATSSDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDL 258
ITKV+ A +SDQKIYSQTIP+ SS D++ E F A+P+ VCCEC SREPEDL
Sbjct: 383 ITKVEDAATSDQKIYSQTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRSREPEDL 442
Query: 257 LICCHLCLNRLVHSYCLDPPLIPWTCNNCRDLRILY 150
LI CHLC R +HSYCLDPPL PW C +C+DL++LY
Sbjct: 443 LIRCHLCETRCIHSYCLDPPLSPWICTHCKDLQMLY 478
>ref|XP_002531481.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223528908|gb|EEF30905.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 460
Score = 237 bits (604), Expect = 5e-60
Identities = 140/325 (43%), Positives = 179/325 (55%), Gaps = 11/325 (3%)
Frame = -2
Query: 1091 STYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFSPLND 912
STYS+ R +R + I N P+ RRL+KKN R LE I+D D E P+
Sbjct: 146 STYSNKRLMRGKRKIFYDIGNTSLTKPSCDGRRLMKKNLGRDNLEIGILDSDNECHPIIP 205
Query: 911 IVDVSNDQNTPRTENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNNVHADD---D 741
+ + S+ + E+ ++ I A T+ + A D +
Sbjct: 206 LDENSDAATSSEFEDHKRTVNTFEIGTAS------------DSALNTEASRYEAFDNIEE 253
Query: 740 LIVRNEGVAP--------VDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRVPASVALSCV 585
+ RN AP V V +G ++ + +V S+ + + +P SV LSCV
Sbjct: 254 ISGRNYMPAPENTSSYPEVTAVDTPYGCPAIQNLAGKNDDV-SQSECISGLPTSVELSCV 312
Query: 584 ICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATSSD 405
ICW ++S RGVLPCGHRFCY+CIQNWADHM SR STCPLCK F SITKV+ A +SD
Sbjct: 313 ICWTDFSSIRGVLPCGHRFCYSCIQNWADHMISRGKISTCPLCKTSFVSITKVEDAATSD 372
Query: 404 QKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLNRL 225
QKIYSQTIP DSS T+I +L D F + + A VC EC REPEDLLI C C R
Sbjct: 373 QKIYSQTIPCDSSTTNILMLHD-RANRFGVESSLATVCGECCCREPEDLLISCDHCHIRC 431
Query: 224 VHSYCLDPPLIPWTCNNCRDLRILY 150
+H YCLDPPLIPWTC C+DL+ LY
Sbjct: 432 IHIYCLDPPLIPWTCIQCKDLQRLY 456