BLASTX nr result

ID: Coptis25_contig00023776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023776
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256...   285   2e-74
emb|CBI16878.3| unnamed protein product [Vitis vinifera]              285   2e-74
ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2...   265   1e-68
gb|ABK94444.1| unknown [Populus trichocarpa]                          265   2e-68
ref|XP_002531481.1| ubiquitin-protein ligase, putative [Ricinus ...   237   5e-60

>ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
          Length = 503

 Score =  285 bits (729), Expect = 2e-74
 Identities = 168/391 (42%), Positives = 220/391 (56%), Gaps = 14/391 (3%)
 Frame = -2

Query: 1268 LDSHLLSENLSPMGTNVTYHNRGKSAACRTSK-----RGCRLSSKKCSIEQSLSGLREIQ 1104
            L+  L+SE  +P+       +  + +AC  SK     +G   +     I+  L      +
Sbjct: 123  LEVPLVSEKANPLTKKNGRAHSVRGSACDISKELWVDKGWGGADDAVWIDSFLLN----E 178

Query: 1103 HGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFS 924
            H E S  S   S R +R+  + I +  ++ P+RK RRLVKKNA R +LES + D D+E +
Sbjct: 179  HEESSFRSHRHSVRQKRSNCNYIYSSTSSEPSRKGRRLVKKNASRDMLESLLSDSDKECN 238

Query: 923  PLNDIVDVSNDQNTPRT-----ENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNN 759
             +      SN    P       +    +I +    +  +               I  +N+
Sbjct: 239  LITARNRRSNLGPPPNCSDGVRDESTSTIRRLTSDDGFYDHGSHRDGTLEDVEEIRDLNH 298

Query: 758  VHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRV----PASVALS 591
              A  D  +  E ++ V +   Q    D EDN      ++SE++   R+    P S  LS
Sbjct: 299  SLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEIKDGDRIRQMIPTSANLS 352

Query: 590  CVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATS 411
            CVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR  +TCPLCKA F SITKVD A  
Sbjct: 353  CVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRRKTATCPLCKASFVSITKVDDAAY 412

Query: 410  SDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLN 231
            SDQKIYSQTIPY  S +DI +L D E  +F AQ +  PVCCEC  REPEDLL+ CHLC  
Sbjct: 413  SDQKIYSQTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRI 472

Query: 230  RLVHSYCLDPPLIPWTCNNCRDLRILYQRFH 138
            R VHSYCLDPPL+PWTC +C+DLR+LY  FH
Sbjct: 473  RCVHSYCLDPPLLPWTCIHCKDLRMLYHHFH 503


>emb|CBI16878.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  285 bits (729), Expect = 2e-74
 Identities = 168/391 (42%), Positives = 220/391 (56%), Gaps = 14/391 (3%)
 Frame = -2

Query: 1268 LDSHLLSENLSPMGTNVTYHNRGKSAACRTSK-----RGCRLSSKKCSIEQSLSGLREIQ 1104
            L+  L+SE  +P+       +  + +AC  SK     +G   +     I+  L      +
Sbjct: 95   LEVPLVSEKANPLTKKNGRAHSVRGSACDISKELWVDKGWGGADDAVWIDSFLLN----E 150

Query: 1103 HGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFS 924
            H E S  S   S R +R+  + I +  ++ P+RK RRLVKKNA R +LES + D D+E +
Sbjct: 151  HEESSFRSHRHSVRQKRSNCNYIYSSTSSEPSRKGRRLVKKNASRDMLESLLSDSDKECN 210

Query: 923  PLNDIVDVSNDQNTPRT-----ENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNN 759
             +      SN    P       +    +I +    +  +               I  +N+
Sbjct: 211  LITARNRRSNLGPPPNCSDGVRDESTSTIRRLTSDDGFYDHGSHRDGTLEDVEEIRDLNH 270

Query: 758  VHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRV----PASVALS 591
              A  D  +  E ++ V +   Q    D EDN      ++SE++   R+    P S  LS
Sbjct: 271  SLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEIKDGDRIRQMIPTSANLS 324

Query: 590  CVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATS 411
            CVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR  +TCPLCKA F SITKVD A  
Sbjct: 325  CVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRRKTATCPLCKASFVSITKVDDAAY 384

Query: 410  SDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLN 231
            SDQKIYSQTIPY  S +DI +L D E  +F AQ +  PVCCEC  REPEDLL+ CHLC  
Sbjct: 385  SDQKIYSQTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRI 444

Query: 230  RLVHSYCLDPPLIPWTCNNCRDLRILYQRFH 138
            R VHSYCLDPPL+PWTC +C+DLR+LY  FH
Sbjct: 445  RCVHSYCLDPPLLPWTCIHCKDLRMLYHHFH 475


>ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  265 bits (678), Expect = 1e-68
 Identities = 148/342 (43%), Positives = 192/342 (56%), Gaps = 5/342 (1%)
 Frame = -2

Query: 1160 LSSKKCSIEQSLSGLREIQHGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKK 981
            L+ K+       S     +H E     +    R  RN +S+  + + A P+RK RRL+KK
Sbjct: 106  LNKKRKPFVHGGSSYNSSRHEESDIVPNMHFVRGRRNTFSNTGSTL-AEPSRKGRRLMKK 164

Query: 980  NACRGILESSIMDLDQEFSPLNDIVDVSNDQNTPRTENENISIPQGRIVEAKFXXXXXXX 801
            N  R  LE+ + D DQE+ P    V ++ + N+  T        +  I EA+        
Sbjct: 165  NIARDNLETLLSDSDQEWHP----VRLNKNNNSKSTAKRTGCKRKLDIFEAEV------- 213

Query: 800  XXXXXXXXITQMNNVHADDDLIVRNEGVAPVDDVPLQHG-----LSDSEDNYDRTQEVDS 636
                              D  ++ N G A      ++ G     L  SE +    +++D 
Sbjct: 214  ----------------TSDVAVINNRGSAVESLDEIEEGTHWNHLPVSEYSNSCPEDMD- 256

Query: 635  ELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLC 456
            + +   R+PA   LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR  STCPLC
Sbjct: 257  QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLC 316

Query: 455  KAIFSSITKVDSATSSDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLS 276
            KA FS ITKV+ A +SDQKIYSQTIP+ SS  D++     E   F A+P+   VCCEC S
Sbjct: 317  KAGFSIITKVEDAATSDQKIYSQTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRS 376

Query: 275  REPEDLLICCHLCLNRLVHSYCLDPPLIPWTCNNCRDLRILY 150
            REPEDLLI CHLC  R +HSYCLDPPL PW C +C+DL++LY
Sbjct: 377  REPEDLLIRCHLCETRCIHSYCLDPPLSPWICTHCKDLQMLY 418


>gb|ABK94444.1| unknown [Populus trichocarpa]
          Length = 482

 Score =  265 bits (677), Expect = 2e-68
 Identities = 146/336 (43%), Positives = 193/336 (57%), Gaps = 13/336 (3%)
 Frame = -2

Query: 1118 LREIQHGEPSTYSSTFS----------TRHERNAYSSIENPITAGPTRKSRRLVKKNACR 969
            L +++HG  S  SS              R  RN +S+  + + A P+RK RRL+KKN  R
Sbjct: 146  LNDVKHGGSSYNSSRHEESDIVPNMHFVRGRRNTFSNTGSTL-AEPSRKGRRLMKKNIAR 204

Query: 968  GILESSIMDLDQEFSPLNDIVDVSNDQNTPRTE-NENISIPQGRIVE--AKFXXXXXXXX 798
              LE+ + D DQE+ P+    + ++     RT     + I +  +    A          
Sbjct: 205  DNLETLLSDSDQEWHPVRLNKNNNSKSTAKRTGCKRKLDIFEAEVTSDVAVINNRGSAVE 264

Query: 797  XXXXXXXITQMNNVHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTT 618
                    T  N++   +      EG     ++    G S +E+   + +++D + +   
Sbjct: 265  SLDEIEEGTHWNHLPVSEYSNSFPEGALTASEIADSSG-SAAENLNAKVKDMD-QFESVA 322

Query: 617  RVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSS 438
            R+PA   LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR  STCPLCKA FS 
Sbjct: 323  RLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLCKAGFSI 382

Query: 437  ITKVDSATSSDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDL 258
            ITKV+ A +SDQKIYSQTIP+ SS  D++     E   F A+P+   VCCEC SREPEDL
Sbjct: 383  ITKVEDAATSDQKIYSQTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRSREPEDL 442

Query: 257  LICCHLCLNRLVHSYCLDPPLIPWTCNNCRDLRILY 150
            LI CHLC  R +HSYCLDPPL PW C +C+DL++LY
Sbjct: 443  LIRCHLCETRCIHSYCLDPPLSPWICTHCKDLQMLY 478


>ref|XP_002531481.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223528908|gb|EEF30905.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 460

 Score =  237 bits (604), Expect = 5e-60
 Identities = 140/325 (43%), Positives = 179/325 (55%), Gaps = 11/325 (3%)
 Frame = -2

Query: 1091 STYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFSPLND 912
            STYS+    R +R  +  I N     P+   RRL+KKN  R  LE  I+D D E  P+  
Sbjct: 146  STYSNKRLMRGKRKIFYDIGNTSLTKPSCDGRRLMKKNLGRDNLEIGILDSDNECHPIIP 205

Query: 911  IVDVSNDQNTPRTENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNNVHADD---D 741
            + + S+   +   E+   ++    I  A                  T+ +   A D   +
Sbjct: 206  LDENSDAATSSEFEDHKRTVNTFEIGTAS------------DSALNTEASRYEAFDNIEE 253

Query: 740  LIVRNEGVAP--------VDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRVPASVALSCV 585
            +  RN   AP        V  V   +G    ++   +  +V S+ +  + +P SV LSCV
Sbjct: 254  ISGRNYMPAPENTSSYPEVTAVDTPYGCPAIQNLAGKNDDV-SQSECISGLPTSVELSCV 312

Query: 584  ICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATSSD 405
            ICW ++S  RGVLPCGHRFCY+CIQNWADHM SR   STCPLCK  F SITKV+ A +SD
Sbjct: 313  ICWTDFSSIRGVLPCGHRFCYSCIQNWADHMISRGKISTCPLCKTSFVSITKVEDAATSD 372

Query: 404  QKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLNRL 225
            QKIYSQTIP DSS T+I +L D     F  + + A VC EC  REPEDLLI C  C  R 
Sbjct: 373  QKIYSQTIPCDSSTTNILMLHD-RANRFGVESSLATVCGECCCREPEDLLISCDHCHIRC 431

Query: 224  VHSYCLDPPLIPWTCNNCRDLRILY 150
            +H YCLDPPLIPWTC  C+DL+ LY
Sbjct: 432  IHIYCLDPPLIPWTCIQCKDLQRLY 456


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