BLASTX nr result
ID: Coptis25_contig00023776
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023776 (1269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256... 285 2e-74 emb|CBI16878.3| unnamed protein product [Vitis vinifera] 285 2e-74 ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2... 265 1e-68 gb|ABK94444.1| unknown [Populus trichocarpa] 265 2e-68 ref|XP_002531481.1| ubiquitin-protein ligase, putative [Ricinus ... 237 5e-60 >ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera] Length = 503 Score = 285 bits (729), Expect = 2e-74 Identities = 168/391 (42%), Positives = 220/391 (56%), Gaps = 14/391 (3%) Frame = -2 Query: 1268 LDSHLLSENLSPMGTNVTYHNRGKSAACRTSK-----RGCRLSSKKCSIEQSLSGLREIQ 1104 L+ L+SE +P+ + + +AC SK +G + I+ L + Sbjct: 123 LEVPLVSEKANPLTKKNGRAHSVRGSACDISKELWVDKGWGGADDAVWIDSFLLN----E 178 Query: 1103 HGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFS 924 H E S S S R +R+ + I + ++ P+RK RRLVKKNA R +LES + D D+E + Sbjct: 179 HEESSFRSHRHSVRQKRSNCNYIYSSTSSEPSRKGRRLVKKNASRDMLESLLSDSDKECN 238 Query: 923 PLNDIVDVSNDQNTPRT-----ENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNN 759 + SN P + +I + + + I +N+ Sbjct: 239 LITARNRRSNLGPPPNCSDGVRDESTSTIRRLTSDDGFYDHGSHRDGTLEDVEEIRDLNH 298 Query: 758 VHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRV----PASVALS 591 A D + E ++ V + Q D EDN ++SE++ R+ P S LS Sbjct: 299 SLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEIKDGDRIRQMIPTSANLS 352 Query: 590 CVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATS 411 CVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR +TCPLCKA F SITKVD A Sbjct: 353 CVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRRKTATCPLCKASFVSITKVDDAAY 412 Query: 410 SDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLN 231 SDQKIYSQTIPY S +DI +L D E +F AQ + PVCCEC REPEDLL+ CHLC Sbjct: 413 SDQKIYSQTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRI 472 Query: 230 RLVHSYCLDPPLIPWTCNNCRDLRILYQRFH 138 R VHSYCLDPPL+PWTC +C+DLR+LY FH Sbjct: 473 RCVHSYCLDPPLLPWTCIHCKDLRMLYHHFH 503 >emb|CBI16878.3| unnamed protein product [Vitis vinifera] Length = 475 Score = 285 bits (729), Expect = 2e-74 Identities = 168/391 (42%), Positives = 220/391 (56%), Gaps = 14/391 (3%) Frame = -2 Query: 1268 LDSHLLSENLSPMGTNVTYHNRGKSAACRTSK-----RGCRLSSKKCSIEQSLSGLREIQ 1104 L+ L+SE +P+ + + +AC SK +G + I+ L + Sbjct: 95 LEVPLVSEKANPLTKKNGRAHSVRGSACDISKELWVDKGWGGADDAVWIDSFLLN----E 150 Query: 1103 HGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFS 924 H E S S S R +R+ + I + ++ P+RK RRLVKKNA R +LES + D D+E + Sbjct: 151 HEESSFRSHRHSVRQKRSNCNYIYSSTSSEPSRKGRRLVKKNASRDMLESLLSDSDKECN 210 Query: 923 PLNDIVDVSNDQNTPRT-----ENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNN 759 + SN P + +I + + + I +N+ Sbjct: 211 LITARNRRSNLGPPPNCSDGVRDESTSTIRRLTSDDGFYDHGSHRDGTLEDVEEIRDLNH 270 Query: 758 VHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRV----PASVALS 591 A D + E ++ V + Q D EDN ++SE++ R+ P S LS Sbjct: 271 SLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEIKDGDRIRQMIPTSANLS 324 Query: 590 CVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATS 411 CVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR +TCPLCKA F SITKVD A Sbjct: 325 CVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRRKTATCPLCKASFVSITKVDDAAY 384 Query: 410 SDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLN 231 SDQKIYSQTIPY S +DI +L D E +F AQ + PVCCEC REPEDLL+ CHLC Sbjct: 385 SDQKIYSQTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRI 444 Query: 230 RLVHSYCLDPPLIPWTCNNCRDLRILYQRFH 138 R VHSYCLDPPL+PWTC +C+DLR+LY FH Sbjct: 445 RCVHSYCLDPPLLPWTCIHCKDLRMLYHHFH 475 >ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1| predicted protein [Populus trichocarpa] Length = 422 Score = 265 bits (678), Expect = 1e-68 Identities = 148/342 (43%), Positives = 192/342 (56%), Gaps = 5/342 (1%) Frame = -2 Query: 1160 LSSKKCSIEQSLSGLREIQHGEPSTYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKK 981 L+ K+ S +H E + R RN +S+ + + A P+RK RRL+KK Sbjct: 106 LNKKRKPFVHGGSSYNSSRHEESDIVPNMHFVRGRRNTFSNTGSTL-AEPSRKGRRLMKK 164 Query: 980 NACRGILESSIMDLDQEFSPLNDIVDVSNDQNTPRTENENISIPQGRIVEAKFXXXXXXX 801 N R LE+ + D DQE+ P V ++ + N+ T + I EA+ Sbjct: 165 NIARDNLETLLSDSDQEWHP----VRLNKNNNSKSTAKRTGCKRKLDIFEAEV------- 213 Query: 800 XXXXXXXXITQMNNVHADDDLIVRNEGVAPVDDVPLQHG-----LSDSEDNYDRTQEVDS 636 D ++ N G A ++ G L SE + +++D Sbjct: 214 ----------------TSDVAVINNRGSAVESLDEIEEGTHWNHLPVSEYSNSCPEDMD- 256 Query: 635 ELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLC 456 + + R+PA LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR STCPLC Sbjct: 257 QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLC 316 Query: 455 KAIFSSITKVDSATSSDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLS 276 KA FS ITKV+ A +SDQKIYSQTIP+ SS D++ E F A+P+ VCCEC S Sbjct: 317 KAGFSIITKVEDAATSDQKIYSQTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRS 376 Query: 275 REPEDLLICCHLCLNRLVHSYCLDPPLIPWTCNNCRDLRILY 150 REPEDLLI CHLC R +HSYCLDPPL PW C +C+DL++LY Sbjct: 377 REPEDLLIRCHLCETRCIHSYCLDPPLSPWICTHCKDLQMLY 418 >gb|ABK94444.1| unknown [Populus trichocarpa] Length = 482 Score = 265 bits (677), Expect = 2e-68 Identities = 146/336 (43%), Positives = 193/336 (57%), Gaps = 13/336 (3%) Frame = -2 Query: 1118 LREIQHGEPSTYSSTFS----------TRHERNAYSSIENPITAGPTRKSRRLVKKNACR 969 L +++HG S SS R RN +S+ + + A P+RK RRL+KKN R Sbjct: 146 LNDVKHGGSSYNSSRHEESDIVPNMHFVRGRRNTFSNTGSTL-AEPSRKGRRLMKKNIAR 204 Query: 968 GILESSIMDLDQEFSPLNDIVDVSNDQNTPRTE-NENISIPQGRIVE--AKFXXXXXXXX 798 LE+ + D DQE+ P+ + ++ RT + I + + A Sbjct: 205 DNLETLLSDSDQEWHPVRLNKNNNSKSTAKRTGCKRKLDIFEAEVTSDVAVINNRGSAVE 264 Query: 797 XXXXXXXITQMNNVHADDDLIVRNEGVAPVDDVPLQHGLSDSEDNYDRTQEVDSELQKTT 618 T N++ + EG ++ G S +E+ + +++D + + Sbjct: 265 SLDEIEEGTHWNHLPVSEYSNSFPEGALTASEIADSSG-SAAENLNAKVKDMD-QFESVA 322 Query: 617 RVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSS 438 R+PA LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR STCPLCKA FS Sbjct: 323 RLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLCKAGFSI 382 Query: 437 ITKVDSATSSDQKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDL 258 ITKV+ A +SDQKIYSQTIP+ SS D++ E F A+P+ VCCEC SREPEDL Sbjct: 383 ITKVEDAATSDQKIYSQTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRSREPEDL 442 Query: 257 LICCHLCLNRLVHSYCLDPPLIPWTCNNCRDLRILY 150 LI CHLC R +HSYCLDPPL PW C +C+DL++LY Sbjct: 443 LIRCHLCETRCIHSYCLDPPLSPWICTHCKDLQMLY 478 >ref|XP_002531481.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223528908|gb|EEF30905.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 460 Score = 237 bits (604), Expect = 5e-60 Identities = 140/325 (43%), Positives = 179/325 (55%), Gaps = 11/325 (3%) Frame = -2 Query: 1091 STYSSTFSTRHERNAYSSIENPITAGPTRKSRRLVKKNACRGILESSIMDLDQEFSPLND 912 STYS+ R +R + I N P+ RRL+KKN R LE I+D D E P+ Sbjct: 146 STYSNKRLMRGKRKIFYDIGNTSLTKPSCDGRRLMKKNLGRDNLEIGILDSDNECHPIIP 205 Query: 911 IVDVSNDQNTPRTENENISIPQGRIVEAKFXXXXXXXXXXXXXXXITQMNNVHADD---D 741 + + S+ + E+ ++ I A T+ + A D + Sbjct: 206 LDENSDAATSSEFEDHKRTVNTFEIGTAS------------DSALNTEASRYEAFDNIEE 253 Query: 740 LIVRNEGVAP--------VDDVPLQHGLSDSEDNYDRTQEVDSELQKTTRVPASVALSCV 585 + RN AP V V +G ++ + +V S+ + + +P SV LSCV Sbjct: 254 ISGRNYMPAPENTSSYPEVTAVDTPYGCPAIQNLAGKNDDV-SQSECISGLPTSVELSCV 312 Query: 584 ICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLCKAIFSSITKVDSATSSD 405 ICW ++S RGVLPCGHRFCY+CIQNWADHM SR STCPLCK F SITKV+ A +SD Sbjct: 313 ICWTDFSSIRGVLPCGHRFCYSCIQNWADHMISRGKISTCPLCKTSFVSITKVEDAATSD 372 Query: 404 QKIYSQTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCLNRL 225 QKIYSQTIP DSS T+I +L D F + + A VC EC REPEDLLI C C R Sbjct: 373 QKIYSQTIPCDSSTTNILMLHD-RANRFGVESSLATVCGECCCREPEDLLISCDHCHIRC 431 Query: 224 VHSYCLDPPLIPWTCNNCRDLRILY 150 +H YCLDPPLIPWTC C+DL+ LY Sbjct: 432 IHIYCLDPPLIPWTCIQCKDLQRLY 456