BLASTX nr result

ID: Coptis25_contig00023772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023772
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33675.3| unnamed protein product [Vitis vinifera]              273   2e-71
ref|XP_002279924.1| PREDICTED: uncharacterized protein LOC100256...   273   2e-71
ref|XP_002516742.1| conserved hypothetical protein [Ricinus comm...   272   3e-71
ref|XP_002329276.1| predicted protein [Populus trichocarpa] gi|2...   268   7e-70
gb|AFK42193.1| unknown [Lotus japonicus]                              244   6e-63

>emb|CBI33675.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  273 bits (697), Expect = 2e-71
 Identities = 122/181 (67%), Positives = 155/181 (85%)
 Frame = -2

Query: 586 HSGIFHVALGFWVLLSFAPQVCKGYGSFTFFLIYLLGGISGNMTSYIHTPEPTVGGTGPI 407
           HSGIFHVALG WVLL+F PQVC+GYGSFTFFLIY+LGGISGN+TS++HTP+ TVGGTGP+
Sbjct: 337 HSGIFHVALGCWVLLTFGPQVCRGYGSFTFFLIYILGGISGNLTSFLHTPDLTVGGTGPV 396

Query: 406 FAIIGAWLIYQFQNKEAIEKEVSESMFRKAVIATALSFVLSNFGPIDNWSHLGAACVGIA 227
           FAIIGAW+I+Q QNK+ I K+VSESM+ KA+IATALS +LS+F PID+W+H GAA  GIA
Sbjct: 397 FAIIGAWVIHQIQNKDVIAKDVSESMYHKAIIATALSSILSHFCPIDDWTHFGAAFTGIA 456

Query: 226 YGFLTCPTLQLDNLPSKTDKKNGFALVRHYADPCKSIVTFAVFIVILSSLLLFVEPQVDT 47
           YG+ TCPT+QL++  SKT +K G  LVR YADPCKS++ F +F+++L  +L F+EP ++T
Sbjct: 457 YGYFTCPTIQLNHTSSKTGQKEGITLVRRYADPCKSLIIFTLFVLVLICVLFFIEPPLNT 516

Query: 46  L 44
           L
Sbjct: 517 L 517


>ref|XP_002279924.1| PREDICTED: uncharacterized protein LOC100256693 [Vitis vinifera]
          Length = 486

 Score =  273 bits (697), Expect = 2e-71
 Identities = 122/181 (67%), Positives = 155/181 (85%)
 Frame = -2

Query: 586 HSGIFHVALGFWVLLSFAPQVCKGYGSFTFFLIYLLGGISGNMTSYIHTPEPTVGGTGPI 407
           HSGIFHVALG WVLL+F PQVC+GYGSFTFFLIY+LGGISGN+TS++HTP+ TVGGTGP+
Sbjct: 300 HSGIFHVALGCWVLLTFGPQVCRGYGSFTFFLIYILGGISGNLTSFLHTPDLTVGGTGPV 359

Query: 406 FAIIGAWLIYQFQNKEAIEKEVSESMFRKAVIATALSFVLSNFGPIDNWSHLGAACVGIA 227
           FAIIGAW+I+Q QNK+ I K+VSESM+ KA+IATALS +LS+F PID+W+H GAA  GIA
Sbjct: 360 FAIIGAWVIHQIQNKDVIAKDVSESMYHKAIIATALSSILSHFCPIDDWTHFGAAFTGIA 419

Query: 226 YGFLTCPTLQLDNLPSKTDKKNGFALVRHYADPCKSIVTFAVFIVILSSLLLFVEPQVDT 47
           YG+ TCPT+QL++  SKT +K G  LVR YADPCKS++ F +F+++L  +L F+EP ++T
Sbjct: 420 YGYFTCPTIQLNHTSSKTGQKEGITLVRRYADPCKSLIIFTLFVLVLICVLFFIEPPLNT 479

Query: 46  L 44
           L
Sbjct: 480 L 480


>ref|XP_002516742.1| conserved hypothetical protein [Ricinus communis]
           gi|223544115|gb|EEF45640.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 429

 Score =  272 bits (696), Expect = 3e-71
 Identities = 123/182 (67%), Positives = 153/182 (84%)
 Frame = -2

Query: 586 HSGIFHVALGFWVLLSFAPQVCKGYGSFTFFLIYLLGGISGNMTSYIHTPEPTVGGTGPI 407
           HSG+FH+ALG W LL+F PQV +GYGSFTF LI++LGGISGN+TS++HTPEPTVGGTGPI
Sbjct: 234 HSGVFHMALGCWSLLTFGPQVSRGYGSFTFVLIFILGGISGNLTSFLHTPEPTVGGTGPI 293

Query: 406 FAIIGAWLIYQFQNKEAIEKEVSESMFRKAVIATALSFVLSNFGPIDNWSHLGAACVGIA 227
           FAIIGAWL++Q QNK+ I K++SESMF+KA+I T LSF+LS+FGPID+W+HLGA   GI 
Sbjct: 294 FAIIGAWLVFQMQNKDVIAKDISESMFQKAIIITGLSFILSHFGPIDDWTHLGATLTGIV 353

Query: 226 YGFLTCPTLQLDNLPSKTDKKNGFALVRHYADPCKSIVTFAVFIVILSSLLLFVEPQVDT 47
           YG+ TCPTLQLDN  S++ +  G A VR YA+ CKS++ FAV IV+L SLL F+EP +DT
Sbjct: 354 YGYFTCPTLQLDNASSRSGQDEGVAFVRGYANSCKSLILFAVLIVLLISLLFFIEPPLDT 413

Query: 46  LE 41
           LE
Sbjct: 414 LE 415


>ref|XP_002329276.1| predicted protein [Populus trichocarpa] gi|222870730|gb|EEF07861.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  268 bits (684), Expect = 7e-70
 Identities = 120/181 (66%), Positives = 151/181 (83%)
 Frame = -2

Query: 586 HSGIFHVALGFWVLLSFAPQVCKGYGSFTFFLIYLLGGISGNMTSYIHTPEPTVGGTGPI 407
           HSG FHV LG W LL+F P+VC+GYGSFTFFLIY+LGGISGN+TS++HTPEPTVGGTGP+
Sbjct: 306 HSGAFHVVLGSWSLLTFGPEVCRGYGSFTFFLIYVLGGISGNLTSFLHTPEPTVGGTGPV 365

Query: 406 FAIIGAWLIYQFQNKEAIEKEVSESMFRKAVIATALSFVLSNFGPIDNWSHLGAACVGIA 227
           FAIIGAWLIYQ QNK+ I K+  + MF+KAVI TA+SF+LS+FGPID+W+HLGA   GI 
Sbjct: 366 FAIIGAWLIYQNQNKDVISKDDFDRMFQKAVITTAVSFILSHFGPIDDWTHLGAVLTGIV 425

Query: 226 YGFLTCPTLQLDNLPSKTDKKNGFALVRHYADPCKSIVTFAVFIVILSSLLLFVEPQVDT 47
           YGF TC TLQLD+  S++ +  G ALV+ +ADPCKS++ F +FI+ LSS+L FVEP ++T
Sbjct: 426 YGFFTCATLQLDDASSRSGQDEGIALVKRHADPCKSLIIFTIFILFLSSMLFFVEPPLET 485

Query: 46  L 44
           +
Sbjct: 486 V 486


>gb|AFK42193.1| unknown [Lotus japonicus]
          Length = 199

 Score =  244 bits (624), Expect = 6e-63
 Identities = 114/184 (61%), Positives = 144/184 (78%), Gaps = 2/184 (1%)
 Frame = -2

Query: 586 HSGIFHVALGFWVLLSFAPQVCKGYGSFTFFLIYLLGGISGNMTSYIHTPEPTVGGTGPI 407
           H+GIFH+AL  W LLSF PQVCKGYGSFTFF+IY+LGG+SGN+TS++HTP+P VGGTGP+
Sbjct: 15  HAGIFHLALSCWALLSFGPQVCKGYGSFTFFMIYILGGVSGNLTSFMHTPDPAVGGTGPV 74

Query: 406 FAIIGAWLIYQFQNKEAIEKEVSESMFRKAVIATALSFVLSNFGPIDNWSHLGAACVGIA 227
           FA+IGAWL+YQ QN++ I  + SE++F+KA+I TAL F+LS+ GPID WSH GAA  G+A
Sbjct: 75  FAVIGAWLMYQIQNRDVIANDASENLFQKAIIITALGFILSSPGPIDEWSHFGAAFTGMA 134

Query: 226 YGFLTCPTLQLDNLPSKTDKKNGFALVRHYADPCKSIVTFAVFIVILSSLLLFVEP--QV 53
           YGFLT P LQLD+  S T ++ G  LVR   D  KS++ F +FI +LSSL  F+EP    
Sbjct: 135 YGFLTSPALQLDD-TSGTGREEGLKLVRRNGDSWKSLIIFTIFIAVLSSLPFFMEPPLSA 193

Query: 52  DTLE 41
           DTLE
Sbjct: 194 DTLE 197


Top