BLASTX nr result

ID: Coptis25_contig00023756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023756
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29897.3| unnamed protein product [Vitis vinifera]              114   6e-44
emb|CAN60311.1| hypothetical protein VITISV_002512 [Vitis vinifera]   114   3e-42
ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Sela...    85   7e-29
ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Sela...    83   2e-28
ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Sela...    83   2e-28

>emb|CBI29897.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  114 bits (284), Expect(2) = 6e-44
 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = -2

Query: 261 VAVVLNLTPDHLERHETMMNYAAAKCRVFSHMNYSKLAILPIGNQHLNEAFKD-VDTCNV 85
           VAVVLNLT DHLERH+TM NYA  KCR+ SHM  SKL ILP GN+ LNEA ++ V+  N+
Sbjct: 196 VAVVLNLTSDHLERHKTMKNYAITKCRLLSHMTNSKLGILPFGNKLLNEAMEELVNEVNL 255

Query: 84  AWIGGFPGIKMDMETRIAEFRCPSTGVI 1
           AWIG FPG+K+D E ++A  R P+ GV+
Sbjct: 256 AWIGAFPGVKVDKEEKVASLRVPAIGVV 283



 Score = 89.0 bits (219), Expect(2) = 6e-44
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = -3

Query: 527 SGQILRQLGVEAFVGGNLGKPLSEAAIQCLAPPPLNRKFEVAVVEVSSYQMEMPNKYFYP 348
           SGQ+L  LG+E FVGGNLG PLSEAAIQCL  P     F+VAVVEVSSYQ+E+PNK+F P
Sbjct: 135 SGQMLSHLGIEVFVGGNLGIPLSEAAIQCLTCPSPKPVFQVAVVEVSSYQLEVPNKHFCP 194

Query: 347 SVS 339
           SV+
Sbjct: 195 SVA 197


>emb|CAN60311.1| hypothetical protein VITISV_002512 [Vitis vinifera]
          Length = 806

 Score =  114 bits (284), Expect(2) = 3e-42
 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = -2

Query: 261 VAVVLNLTPDHLERHETMMNYAAAKCRVFSHMNYSKLAILPIGNQHLNEAFKD-VDTCNV 85
           VAVVLNLT DHLERH+TM NYA  KCR+ SHM  SKL ILP GN+ LNEA ++ V+  N+
Sbjct: 297 VAVVLNLTSDHLERHKTMKNYAITKCRLLSHMTNSKLGILPFGNKLLNEAMEELVNEVNL 356

Query: 84  AWIGGFPGIKMDMETRIAEFRCPSTGVI 1
           AWIG FPG+K+D E ++A  R P+ GV+
Sbjct: 357 AWIGAFPGVKVDKEEKVASLRVPAIGVV 384



 Score = 83.2 bits (204), Expect(2) = 3e-42
 Identities = 41/60 (68%), Positives = 48/60 (80%)
 Frame = -3

Query: 518 ILRQLGVEAFVGGNLGKPLSEAAIQCLAPPPLNRKFEVAVVEVSSYQMEMPNKYFYPSVS 339
           +L  LG+E FVGGNLG PLSEAAIQCL  P     F+VAVVEVSSYQ+E+PNK+F PSV+
Sbjct: 239 MLSHLGIEVFVGGNLGIPLSEAAIQCLTCPSPKPVFQVAVVEVSSYQLEVPNKHFCPSVA 298


>ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Selaginella moellendorffii]
           gi|300148404|gb|EFJ15064.1| hypothetical protein
           SELMODRAFT_119124 [Selaginella moellendorffii]
          Length = 492

 Score = 84.7 bits (208), Expect(2) = 7e-29
 Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = -2

Query: 294 LPSSYSMKSVQVAVVLNLTPDHLERHETMMNYAAAKCRVFSHMNYSKLAILPIGNQHLNE 115
           LP S+S     V V+LNL+PDHLERH++M NY   KCR+F  M+ SKL+I+P G++ L +
Sbjct: 197 LPGSFSPS---VGVILNLSPDHLERHKSMENYGETKCRLFERMDSSKLSIIPHGDEFLRK 253

Query: 114 -AFKDVDTCNVAWIGGFPGIKMDMETRIAEFRCPST 10
            A+K       AW+G  PG+++D + R A    P+T
Sbjct: 254 VAYKYNSGSTKAWLGALPGVQLDNQARRAVVVVPTT 289



 Score = 67.8 bits (164), Expect(2) = 7e-29
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = -3

Query: 527 SGQILRQLGVEAFVGGNLGKPLSEAAIQCLAPPPLNRKFEVAVVEVSSYQMEMPNKYFYP 348
           +GQIL+Q GV  FVGGNLG P S+AA +C   P  +  ++V V+EVSSYQ+E+P   F P
Sbjct: 145 TGQILQQAGVRTFVGGNLGTPFSDAACECFMFPSDDPPYQVTVLEVSSYQLELPGS-FSP 203

Query: 347 SV 342
           SV
Sbjct: 204 SV 205


>ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Selaginella moellendorffii]
           gi|300148408|gb|EFJ15068.1| hypothetical protein
           SELMODRAFT_119501 [Selaginella moellendorffii]
          Length = 492

 Score = 83.2 bits (204), Expect(2) = 2e-28
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
 Frame = -2

Query: 294 LPSSYSMKSVQVAVVLNLTPDHLERHETMMNYAAAKCRVFSHMNYSKLAILPIGNQHLNE 115
           LP S+S     V V+LNL+PDHLERH++M NY   KCR+F  M+ SKL+I+P  ++ L +
Sbjct: 197 LPGSFSPS---VGVILNLSPDHLERHKSMENYGETKCRLFERMDSSKLSIIPHADEFLRK 253

Query: 114 -AFKDVDTCNVAWIGGFPGIKMDMETRIAEFRCPST 10
            A+K       AW+G  PGI++D + R A    P+T
Sbjct: 254 VAYKYNSGSTKAWLGALPGIQLDSQARRAVVVVPTT 289



 Score = 67.4 bits (163), Expect(2) = 2e-28
 Identities = 33/62 (53%), Positives = 44/62 (70%)
 Frame = -3

Query: 527 SGQILRQLGVEAFVGGNLGKPLSEAAIQCLAPPPLNRKFEVAVVEVSSYQMEMPNKYFYP 348
           +GQIL+Q GV  F+GGNLG P S+AA +C   P  +  ++V V+EVSSYQ+E+P   F P
Sbjct: 145 TGQILQQAGVRTFIGGNLGTPFSDAACECFKFPSDDPPYQVTVLEVSSYQLELPGS-FSP 203

Query: 347 SV 342
           SV
Sbjct: 204 SV 205


>ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Selaginella moellendorffii]
           gi|300171022|gb|EFJ37622.1| hypothetical protein
           SELMODRAFT_229823 [Selaginella moellendorffii]
          Length = 492

 Score = 82.8 bits (203), Expect(2) = 2e-28
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
 Frame = -2

Query: 294 LPSSYSMKSVQVAVVLNLTPDHLERHETMMNYAAAKCRVFSHMNYSKLAILPIGNQHLNE 115
           LP S+S     V V+LNL+PDHLERH++M NY   KCR+F  M+ SKL+I+P  ++ L +
Sbjct: 197 LPGSFSPS---VGVILNLSPDHLERHKSMENYGETKCRLFERMDSSKLSIIPHADEFLRK 253

Query: 114 -AFKDVDTCNVAWIGGFPGIKMDMETRIAEFRCPST 10
            A+K       AW+G  PG+++D + R A    P+T
Sbjct: 254 VAYKYNSGSTKAWLGALPGVQLDSQARRAVVVVPTT 289



 Score = 67.8 bits (164), Expect(2) = 2e-28
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = -3

Query: 527 SGQILRQLGVEAFVGGNLGKPLSEAAIQCLAPPPLNRKFEVAVVEVSSYQMEMPNKYFYP 348
           +GQIL+Q GV  FVGGNLG P S+AA +C   P  +  ++ AV+EVSSYQ+E+P   F P
Sbjct: 145 TGQILQQAGVRTFVGGNLGTPFSDAACECFKFPSDDPPYQAAVLEVSSYQLELPGS-FSP 203

Query: 347 SV 342
           SV
Sbjct: 204 SV 205


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