BLASTX nr result

ID: Coptis25_contig00023747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023747
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW22876.1| unknown [Solanum lycopersicum]                         145   3e-33
ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NF...   145   3e-33
ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NF...   145   4e-33
ref|XP_002316211.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type z...   140   1e-31

>gb|AAW22876.1| unknown [Solanum lycopersicum]
          Length = 727

 Score =  145 bits (367), Expect = 3e-33
 Identities = 63/107 (58%), Positives = 72/107 (67%)
 Frame = -2

Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142
           LLLCHPGPCPSCPKLV+S+CFCG +EDVKRCGFKNFSCNGVC+K+LDC  H C E CH  
Sbjct: 186 LLLCHPGPCPSCPKLVTSKCFCGAVEDVKRCGFKNFSCNGVCKKMLDCNTHRCNEICHAD 245

Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVCE 1
            CPPC+AKG++                         KLLGCG+H CE
Sbjct: 246 DCPPCKAKGMFNCQCGKVEMKRECFDRVFRCENPCEKLLGCGRHKCE 292



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
 Frame = -2

Query: 318 LLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNF----------SCNGVCEKVLDCGVH 169
           L CHPG CP C  L+   C CG +  V  C + N           SC G C + L    H
Sbjct: 497 LSCHPGECPPCKALIKRSCHCGSMVHVFECIYYNSLSAKEQLTVRSCGGPCHRKLPNCTH 556

Query: 168 CCLETCHDGLCP 133
            C ETCH G CP
Sbjct: 557 LCPETCHPGECP 568


>ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Glycine max]
          Length = 877

 Score =  145 bits (366), Expect = 3e-33
 Identities = 64/107 (59%), Positives = 68/107 (63%)
 Frame = -2

Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142
           LLLCHPGPCPSCPKLV  RCFCG +EDV+RCGFK FSCN  C K LDCGVH C+E CH G
Sbjct: 203 LLLCHPGPCPSCPKLVKVRCFCGCLEDVRRCGFKEFSCNKPCSKFLDCGVHRCIELCHPG 262

Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVCE 1
            CPPCR +GVY                         K LGCGKHVCE
Sbjct: 263 ACPPCRTRGVYTCRCGKVKEERECFDRGFQCENPCEKRLGCGKHVCE 309



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/67 (43%), Positives = 35/67 (52%)
 Frame = -2

Query: 315 LCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           LCHPG CP C       C CG++++ + C  + F C   CEK L CG H C   CH G C
Sbjct: 258 LCHPGACPPCRTRGVYTCRCGKVKEERECFDRGFQCENPCEKRLGCGKHVCERGCHSGEC 317

Query: 135 PPCRAKG 115
             C  KG
Sbjct: 318 GECPLKG 324



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -2

Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           CH G C  +C  +V   C CG ++    C +++ +C   C+++ DCG H C   C DG C
Sbjct: 366 CHRGQCVETCRVVVKKSCRCGSLKKDVPC-YQDLACERKCQRMRDCGRHACKRRCCDGDC 424

Query: 135 PPC 127
           PPC
Sbjct: 425 PPC 427



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
 Frame = -2

Query: 312 CHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNF----------SCNGVCEKVLDCGVHCC 163
           CHP  CP C  L+   C CG +  V  C + N           SC G C + L    H C
Sbjct: 650 CHPEDCPPCKVLIKRSCHCGAMVHVFECLYYNSLSAKGQETVRSCGGPCHRKLPNCTHLC 709

Query: 162 LETCHDGLC 136
            ETCH G C
Sbjct: 710 PETCHPGQC 718


>ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NFXL2 [Vitis vinifera]
          Length = 875

 Score =  145 bits (365), Expect = 4e-33
 Identities = 59/106 (55%), Positives = 70/106 (66%)
 Frame = -2

Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142
           LLLCHPGPCPSCPKLV +RCFCG +EDV+RCGFK FSC  +C K+LDCG+H C +TCHDG
Sbjct: 194 LLLCHPGPCPSCPKLVQARCFCGSVEDVQRCGFKKFSCKNICSKLLDCGIHRCSDTCHDG 253

Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVC 4
            CPPC+A+ VY                         ++LGCGKH C
Sbjct: 254 PCPPCQARSVYRCQCGEIEEERECCDRVFRCEVPCGRVLGCGKHAC 299



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/66 (43%), Positives = 35/66 (53%)
 Frame = -2

Query: 312 CHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLCP 133
           CH GPCP C      RC CG IE+ + C  + F C   C +VL CG H C + CH G C 
Sbjct: 250 CHDGPCPPCQARSVYRCQCGEIEEERECCDRVFRCEVPCGRVLGCGKHACSKGCHSGECG 309

Query: 132 PCRAKG 115
            C  +G
Sbjct: 310 QCPLQG 315



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -2

Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           CH G C  +C  +V   C CG ++    C +++ +C   C+KV DCG H C   C DG C
Sbjct: 357 CHRGQCIETCRTVVIKGCRCGSLKKEVPC-YQDLACERKCQKVRDCGRHACKRRCCDGDC 415

Query: 135 PPC 127
           PPC
Sbjct: 416 PPC 418



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
 Frame = -2

Query: 312 CHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNF----------SCNGVCEKVLDCGVHCC 163
           CHPG C  C  L+   C CG +  V  C + N           SC G C + L    H C
Sbjct: 647 CHPGECAPCKVLIKRSCHCGSMVHVFECLYFNSLSEKEQMTIRSCGGPCHRKLPNCTHLC 706

Query: 162 LETCHDGLCP 133
            ETCH G CP
Sbjct: 707 PETCHPGQCP 716



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -2

Query: 312 CHPGPCPSCPKLVSSRCFCG-RIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           CH G C  CP      C CG R+ +   C      C   C+K+L CG H C E CH G C
Sbjct: 303 CHSGECGQCPLQGRRTCPCGKRVYEGMACDVSVPLCGATCDKMLSCGFHSCPERCHRGQC 362


>ref|XP_002316211.1| predicted protein [Populus trichocarpa] gi|222865251|gb|EEF02382.1|
           predicted protein [Populus trichocarpa]
          Length = 890

 Score =  143 bits (361), Expect = 1e-32
 Identities = 61/107 (57%), Positives = 69/107 (64%)
 Frame = -2

Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142
           LLLCHPGPCPSCPKLV + CFCG+  DVKRCG+K FSCN +C+K LDCG+H C + CHDG
Sbjct: 207 LLLCHPGPCPSCPKLVKATCFCGKTTDVKRCGYKLFSCNNICKKSLDCGIHSCKQICHDG 266

Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVCE 1
            CPPC A+GVY                         KLL CGKHVCE
Sbjct: 267 PCPPCNARGVYKCSCGRKVEERECCEREFRCENPCEKLLACGKHVCE 313



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 28/67 (41%), Positives = 35/67 (52%)
 Frame = -2

Query: 315 LCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           +CH GPCP C      +C CGR  + + C  + F C   CEK+L CG H C   CH G C
Sbjct: 262 ICHDGPCPPCNARGVYKCSCGRKVEERECCEREFRCENPCEKLLACGKHVCERGCHFGEC 321

Query: 135 PPCRAKG 115
             C  +G
Sbjct: 322 GDCPLQG 328



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
 Frame = -2

Query: 318 LLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKN----------FSCNGVCEKVLDCGVH 169
           L CHPG CP C  LV   C+CG +  V  C + N           SC G C + L    H
Sbjct: 659 LPCHPGDCPPCKVLVKRSCYCGSMVHVFECIYYNNLSEKEQMAARSCGGSCHRKLPNCTH 718

Query: 168 CCLETCHDGLCP 133
            C +TCH G CP
Sbjct: 719 LCPKTCHPGQCP 730



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = -2

Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           CH GPC  +C  +V+  C CG ++    C +++ +C   C+++ DCG H C   C DG C
Sbjct: 370 CHRGPCIETCRIVVTKLCRCGGMKKEVPC-YQDLACERKCQRMRDCGRHACKRRCCDGDC 428

Query: 135 PPC 127
           PPC
Sbjct: 429 PPC 431



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -2

Query: 312 CHPGPCPSCPKLVSSRCFCG-RIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           CH G C  CP      C CG R+ +   C      C G C+K+L CG H C E CH G C
Sbjct: 316 CHFGECGDCPLQGKRACPCGKRLYEGMACDIVVPLCGGTCDKMLSCGFHRCHERCHRGPC 375


>ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type zinc finger protein
           NFXL2-like, partial [Cucumis sativus]
          Length = 628

 Score =  140 bits (352), Expect = 1e-31
 Identities = 59/106 (55%), Positives = 67/106 (63%)
 Frame = -2

Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142
           LLLCHPGPCPSCPK+V + C+CG + D +RCGFKNFSCN VC KVLDCG H C E CH+G
Sbjct: 189 LLLCHPGPCPSCPKIVQASCYCGSVRDARRCGFKNFSCNNVCSKVLDCGRHKCAEICHEG 248

Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVC 4
            CPPCR +GV+                         KLLGCGKH C
Sbjct: 249 SCPPCRIQGVFKCQCGKTEEKRECWDRSFRCEDECNKLLGCGKHSC 294



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 27/67 (40%), Positives = 36/67 (53%)
 Frame = -2

Query: 315 LCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           +CH G CP C      +C CG+ E+ + C  ++F C   C K+L CG H C + CH G C
Sbjct: 244 ICHEGSCPPCRIQGVFKCQCGKTEEKRECWDRSFRCEDECNKLLGCGKHSCNKGCHSGEC 303

Query: 135 PPCRAKG 115
             C  KG
Sbjct: 304 GQCPFKG 310



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -2

Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136
           CH GPC  +C  +V   C CG +     C +++ +C   C ++ DCG H C   C DG C
Sbjct: 352 CHRGPCIGTCRIVVFKSCRCGSLRKEIPC-YQDLACERKCNRMRDCGRHACRRRCCDGDC 410

Query: 135 PPC 127
           PPC
Sbjct: 411 PPC 413


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