BLASTX nr result
ID: Coptis25_contig00023747
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023747 (322 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAW22876.1| unknown [Solanum lycopersicum] 145 3e-33 ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NF... 145 3e-33 ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NF... 145 4e-33 ref|XP_002316211.1| predicted protein [Populus trichocarpa] gi|2... 143 1e-32 ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type z... 140 1e-31 >gb|AAW22876.1| unknown [Solanum lycopersicum] Length = 727 Score = 145 bits (367), Expect = 3e-33 Identities = 63/107 (58%), Positives = 72/107 (67%) Frame = -2 Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142 LLLCHPGPCPSCPKLV+S+CFCG +EDVKRCGFKNFSCNGVC+K+LDC H C E CH Sbjct: 186 LLLCHPGPCPSCPKLVTSKCFCGAVEDVKRCGFKNFSCNGVCKKMLDCNTHRCNEICHAD 245 Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVCE 1 CPPC+AKG++ KLLGCG+H CE Sbjct: 246 DCPPCKAKGMFNCQCGKVEMKRECFDRVFRCENPCEKLLGCGRHKCE 292 Score = 62.0 bits (149), Expect = 5e-08 Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 10/72 (13%) Frame = -2 Query: 318 LLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNF----------SCNGVCEKVLDCGVH 169 L CHPG CP C L+ C CG + V C + N SC G C + L H Sbjct: 497 LSCHPGECPPCKALIKRSCHCGSMVHVFECIYYNSLSAKEQLTVRSCGGPCHRKLPNCTH 556 Query: 168 CCLETCHDGLCP 133 C ETCH G CP Sbjct: 557 LCPETCHPGECP 568 >ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Glycine max] Length = 877 Score = 145 bits (366), Expect = 3e-33 Identities = 64/107 (59%), Positives = 68/107 (63%) Frame = -2 Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142 LLLCHPGPCPSCPKLV RCFCG +EDV+RCGFK FSCN C K LDCGVH C+E CH G Sbjct: 203 LLLCHPGPCPSCPKLVKVRCFCGCLEDVRRCGFKEFSCNKPCSKFLDCGVHRCIELCHPG 262 Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVCE 1 CPPCR +GVY K LGCGKHVCE Sbjct: 263 ACPPCRTRGVYTCRCGKVKEERECFDRGFQCENPCEKRLGCGKHVCE 309 Score = 72.8 bits (177), Expect = 3e-11 Identities = 29/67 (43%), Positives = 35/67 (52%) Frame = -2 Query: 315 LCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 LCHPG CP C C CG++++ + C + F C CEK L CG H C CH G C Sbjct: 258 LCHPGACPPCRTRGVYTCRCGKVKEERECFDRGFQCENPCEKRLGCGKHVCERGCHSGEC 317 Query: 135 PPCRAKG 115 C KG Sbjct: 318 GECPLKG 324 Score = 58.2 bits (139), Expect = 7e-07 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = -2 Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 CH G C +C +V C CG ++ C +++ +C C+++ DCG H C C DG C Sbjct: 366 CHRGQCVETCRVVVKKSCRCGSLKKDVPC-YQDLACERKCQRMRDCGRHACKRRCCDGDC 424 Query: 135 PPC 127 PPC Sbjct: 425 PPC 427 Score = 55.5 bits (132), Expect = 5e-06 Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 10/69 (14%) Frame = -2 Query: 312 CHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNF----------SCNGVCEKVLDCGVHCC 163 CHP CP C L+ C CG + V C + N SC G C + L H C Sbjct: 650 CHPEDCPPCKVLIKRSCHCGAMVHVFECLYYNSLSAKGQETVRSCGGPCHRKLPNCTHLC 709 Query: 162 LETCHDGLC 136 ETCH G C Sbjct: 710 PETCHPGQC 718 >ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NFXL2 [Vitis vinifera] Length = 875 Score = 145 bits (365), Expect = 4e-33 Identities = 59/106 (55%), Positives = 70/106 (66%) Frame = -2 Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142 LLLCHPGPCPSCPKLV +RCFCG +EDV+RCGFK FSC +C K+LDCG+H C +TCHDG Sbjct: 194 LLLCHPGPCPSCPKLVQARCFCGSVEDVQRCGFKKFSCKNICSKLLDCGIHRCSDTCHDG 253 Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVC 4 CPPC+A+ VY ++LGCGKH C Sbjct: 254 PCPPCQARSVYRCQCGEIEEERECCDRVFRCEVPCGRVLGCGKHAC 299 Score = 71.2 bits (173), Expect = 8e-11 Identities = 29/66 (43%), Positives = 35/66 (53%) Frame = -2 Query: 312 CHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLCP 133 CH GPCP C RC CG IE+ + C + F C C +VL CG H C + CH G C Sbjct: 250 CHDGPCPPCQARSVYRCQCGEIEEERECCDRVFRCEVPCGRVLGCGKHACSKGCHSGECG 309 Query: 132 PCRAKG 115 C +G Sbjct: 310 QCPLQG 315 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = -2 Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 CH G C +C +V C CG ++ C +++ +C C+KV DCG H C C DG C Sbjct: 357 CHRGQCIETCRTVVIKGCRCGSLKKEVPC-YQDLACERKCQKVRDCGRHACKRRCCDGDC 415 Query: 135 PPC 127 PPC Sbjct: 416 PPC 418 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Frame = -2 Query: 312 CHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNF----------SCNGVCEKVLDCGVHCC 163 CHPG C C L+ C CG + V C + N SC G C + L H C Sbjct: 647 CHPGECAPCKVLIKRSCHCGSMVHVFECLYFNSLSEKEQMTIRSCGGPCHRKLPNCTHLC 706 Query: 162 LETCHDGLCP 133 ETCH G CP Sbjct: 707 PETCHPGQCP 716 Score = 55.5 bits (132), Expect = 5e-06 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -2 Query: 312 CHPGPCPSCPKLVSSRCFCG-RIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 CH G C CP C CG R+ + C C C+K+L CG H C E CH G C Sbjct: 303 CHSGECGQCPLQGRRTCPCGKRVYEGMACDVSVPLCGATCDKMLSCGFHSCPERCHRGQC 362 >ref|XP_002316211.1| predicted protein [Populus trichocarpa] gi|222865251|gb|EEF02382.1| predicted protein [Populus trichocarpa] Length = 890 Score = 143 bits (361), Expect = 1e-32 Identities = 61/107 (57%), Positives = 69/107 (64%) Frame = -2 Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142 LLLCHPGPCPSCPKLV + CFCG+ DVKRCG+K FSCN +C+K LDCG+H C + CHDG Sbjct: 207 LLLCHPGPCPSCPKLVKATCFCGKTTDVKRCGYKLFSCNNICKKSLDCGIHSCKQICHDG 266 Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVCE 1 CPPC A+GVY KLL CGKHVCE Sbjct: 267 PCPPCNARGVYKCSCGRKVEERECCEREFRCENPCEKLLACGKHVCE 313 Score = 69.3 bits (168), Expect = 3e-10 Identities = 28/67 (41%), Positives = 35/67 (52%) Frame = -2 Query: 315 LCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 +CH GPCP C +C CGR + + C + F C CEK+L CG H C CH G C Sbjct: 262 ICHDGPCPPCNARGVYKCSCGRKVEERECCEREFRCENPCEKLLACGKHVCERGCHFGEC 321 Query: 135 PPCRAKG 115 C +G Sbjct: 322 GDCPLQG 328 Score = 61.6 bits (148), Expect = 6e-08 Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Frame = -2 Query: 318 LLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKN----------FSCNGVCEKVLDCGVH 169 L CHPG CP C LV C+CG + V C + N SC G C + L H Sbjct: 659 LPCHPGDCPPCKVLVKRSCYCGSMVHVFECIYYNNLSEKEQMAARSCGGSCHRKLPNCTH 718 Query: 168 CCLETCHDGLCP 133 C +TCH G CP Sbjct: 719 LCPKTCHPGQCP 730 Score = 60.5 bits (145), Expect = 1e-07 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = -2 Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 CH GPC +C +V+ C CG ++ C +++ +C C+++ DCG H C C DG C Sbjct: 370 CHRGPCIETCRIVVTKLCRCGGMKKEVPC-YQDLACERKCQRMRDCGRHACKRRCCDGDC 428 Query: 135 PPC 127 PPC Sbjct: 429 PPC 431 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -2 Query: 312 CHPGPCPSCPKLVSSRCFCG-RIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 CH G C CP C CG R+ + C C G C+K+L CG H C E CH G C Sbjct: 316 CHFGECGDCPLQGKRACPCGKRLYEGMACDIVVPLCGGTCDKMLSCGFHRCHERCHRGPC 375 >ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type zinc finger protein NFXL2-like, partial [Cucumis sativus] Length = 628 Score = 140 bits (352), Expect = 1e-31 Identities = 59/106 (55%), Positives = 67/106 (63%) Frame = -2 Query: 321 LLLCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDG 142 LLLCHPGPCPSCPK+V + C+CG + D +RCGFKNFSCN VC KVLDCG H C E CH+G Sbjct: 189 LLLCHPGPCPSCPKIVQASCYCGSVRDARRCGFKNFSCNNVCSKVLDCGRHKCAEICHEG 248 Query: 141 LCPPCRAKGVYXXXXXXXXXXXXXXXXXXXXXXXXXKLLGCGKHVC 4 CPPCR +GV+ KLLGCGKH C Sbjct: 249 SCPPCRIQGVFKCQCGKTEEKRECWDRSFRCEDECNKLLGCGKHSC 294 Score = 68.9 bits (167), Expect = 4e-10 Identities = 27/67 (40%), Positives = 36/67 (53%) Frame = -2 Query: 315 LCHPGPCPSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 +CH G CP C +C CG+ E+ + C ++F C C K+L CG H C + CH G C Sbjct: 244 ICHEGSCPPCRIQGVFKCQCGKTEEKRECWDRSFRCEDECNKLLGCGKHSCNKGCHSGEC 303 Query: 135 PPCRAKG 115 C KG Sbjct: 304 GQCPFKG 310 Score = 58.5 bits (140), Expect = 5e-07 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -2 Query: 312 CHPGPC-PSCPKLVSSRCFCGRIEDVKRCGFKNFSCNGVCEKVLDCGVHCCLETCHDGLC 136 CH GPC +C +V C CG + C +++ +C C ++ DCG H C C DG C Sbjct: 352 CHRGPCIGTCRIVVFKSCRCGSLRKEIPC-YQDLACERKCNRMRDCGRHACRRRCCDGDC 410 Query: 135 PPC 127 PPC Sbjct: 411 PPC 413