BLASTX nr result
ID: Coptis25_contig00023744
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023744
(1137 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,... 352 8e-95
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera] 345 2e-92
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi... 340 3e-91
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi... 324 2e-86
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi... 324 2e-86
>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 695
Score = 352 bits (904), Expect = 8e-95
Identities = 185/377 (49%), Positives = 248/377 (65%), Gaps = 1/377 (0%)
Frame = -3
Query: 1129 ISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQ-KGFFPD 953
IS+ + G ++ ++F+ E +WN+M+ G+ +NN F E ++L+ Q ++ + D
Sbjct: 144 ISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILD 203
Query: 952 QFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVF 773
TF L A + + GLGQQ+HA +K+ V +V VLN++L MY +C
Sbjct: 204 DVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVL-SVTVLNAILVMYSRCN--------- 253
Query: 772 QQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLM 593
+++ + ++F +MP +DVVSWNTM+S F+QNG D EGLM
Sbjct: 254 ----------------------SVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLM 291
Query: 592 LVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEGMDSYLIDMYSK 413
LVYEM+KQG + DSV SNL+N EIGKQTHAYL RHGI+F+GMDSYLIDMY+K
Sbjct: 292 LVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDSYLIDMYAK 351
Query: 412 SGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTLA 233
SGLI +Q +F NN I NRD TWNA+IAGY QNG +E+AFI FR ML+ N PN+VTLA
Sbjct: 352 SGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLA 411
Query: 232 SLLPACIPSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVCDSIPEK 53
S+LPAC G I+LGKQ+HG +IR+S+D N+FV TAL+DMYSK +I YAE V E+
Sbjct: 412 SILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSER 471
Query: 52 NTVTYTTIILGYGQHGL 2
N+VTYTT+ILGYGQHG+
Sbjct: 472 NSVTYTTMILGYGQHGM 488
Score = 124 bits (312), Expect = 3e-26
Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 1/319 (0%)
Frame = -3
Query: 1132 MISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFPD 953
M S C++ + + +F + E D++ WN+M+ G+ +N L EE + L ++ ++GF D
Sbjct: 248 MYSRCNS---VQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIAD 304
Query: 952 QFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVF 773
T +L A + + + +G+Q HA L++ D + + L+DMY K + VF
Sbjct: 305 SVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMD--SYLIDMYAKSGLIRISQRVF 362
Query: 772 QQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLM 593
+ N + +RD +WN +++ + QNG + +
Sbjct: 363 EN-----------------------------NNIQNRDQATWNAVIAGYTQNGLVEQAFI 393
Query: 592 LVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFE-GMDSYLIDMYS 416
M +Q L ++V S+L + +GKQ H R+ + + + L+DMYS
Sbjct: 394 TFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYS 453
Query: 415 KSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTL 236
KSG I+ A+ +F + R+ VT+ MI GY Q+G E A F M K P+++T
Sbjct: 454 KSGAINYAESVFTQSS--ERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITF 511
Query: 235 ASLLPACIPSGGISLGKQI 179
++L AC +G + G +I
Sbjct: 512 VAVLSACSYAGLVDEGLRI 530
Score = 100 bits (250), Expect = 5e-19
Identities = 69/233 (29%), Positives = 120/233 (51%), Gaps = 4/233 (1%)
Frame = -3
Query: 688 KLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLMLVYEMKKQGLLIDSVXXXXXXXXXSNLK 509
K+F M RDV++WNTMVS +V+ E + M K G+ V S++
Sbjct: 55 KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114
Query: 508 NCEIGKQTHAYLFRHGIRFEG---MDSYLIDMYSKSGLIDTAQLLFNNNCIHNRDHVTWN 338
+ + + L + G + + S I MY++ G +D + +F ++C+ V WN
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVF-DSCLEKSAEV-WN 172
Query: 337 AMIAGYAQNGEIEEAFIAFRQMLK-HNELPNSVTLASLLPACIPSGGISLGKQIHGYAIR 161
MI G+ QN E F Q +K + + + VT S L A + LG+Q+H + ++
Sbjct: 173 TMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMK 232
Query: 160 HSIDHNVFVGTALIDMYSKCASIRYAEKVCDSIPEKNTVTYTTIILGYGQHGL 2
+ +V V A++ MYS+C S++ + +V + +PEK+ V++ T+I G+ Q+GL
Sbjct: 233 NHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGL 285
Score = 98.6 bits (244), Expect = 3e-18
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 6/193 (3%)
Frame = -3
Query: 1132 MISICSASGIMNCASRLF--NHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFF 959
+I + + SG++ + R+F N++Q D WN+++ GYT+N L E+A + +L++
Sbjct: 345 LIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLR 404
Query: 958 PDQFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAML 779
P+ T IL AC+++ S LG+Q+H ++ + N+FV +L+DMY K A
Sbjct: 405 PNAVTLASILPACSSLGSINLGKQLHGVSIRYS-LDQNIFVRTALVDMYSKSGAINYAES 463
Query: 778 VFQQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMP----HRDVVSWNTMVSAFVQNGF 611
VF Q E +S ++ M+ G G E A LF+ M D +++ ++SA G
Sbjct: 464 VFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGL 523
Query: 610 DGEGLMLVYEMKK 572
EGL + MK+
Sbjct: 524 VDEGLRIFESMKR 536
>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 345 bits (884), Expect = 2e-92
Identities = 186/370 (50%), Positives = 241/370 (65%), Gaps = 1/370 (0%)
Frame = -3
Query: 1108 GIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQ-KGFFPDQFTFPCI 932
G ++ A +F+ E + +WN+M+ GY +NN EAI L+ Q+++ + F D TF
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSA 328
Query: 931 LKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEPD 752
L A + + LG+Q+HA ++KS + V +LN+++ MY +C
Sbjct: 329 LTAISQLQWLDLGRQLHAYILKSSTILQ-VVILNAIIVMYSRC----------------- 370
Query: 751 STSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLMLVYEMKK 572
G++ + K+F+ M RDVV+WNTMVSAFVQNG D EGLMLV+EM+K
Sbjct: 371 --------------GSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQK 416
Query: 571 QGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEGMDSYLIDMYSKSGLIDTA 392
QG ++DSV SNL++ EIGKQ HAYL RHGI+FEGMD YLIDMY+KSGLI TA
Sbjct: 417 QGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKSGLITTA 476
Query: 391 QLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTLASLLPACI 212
Q LF N ++RD TWNAMIAGY QNG EE F FR+M++ N PN+VTLAS+LPAC
Sbjct: 477 QQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACN 536
Query: 211 PSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVCDSIPEKNTVTYTT 32
P G I LGKQIHG+AIR ++ NVFVGTAL+DMYSK +I YAE V EKN+VTYTT
Sbjct: 537 PMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTT 596
Query: 31 IILGYGQHGL 2
+IL YGQHG+
Sbjct: 597 MILSYGQHGM 606
Score = 144 bits (364), Expect = 3e-32
Identities = 107/383 (27%), Positives = 185/383 (48%), Gaps = 5/383 (1%)
Frame = -3
Query: 1135 RMISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFP 956
R+ +C G + A LF+ + P +LWN+++ G+ NN+ +A+ YA++
Sbjct: 43 RLSHLCR-QGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 955 -DQFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAML 779
D +TF LKACA S LG+ +H +++S S + V NSLL+MY C + +
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRI-VYNSLLNMYSTCLTEVPYL- 159
Query: 778 VFQQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEG 599
T+++ N + ++F+ M R+VV+WNTM+S +V+ E
Sbjct: 160 ---------GTAYDF--------NNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEA 202
Query: 598 LMLVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEG---MDSYLI 428
+ M + G+ V + + + + + + G + + S I
Sbjct: 203 FKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAI 262
Query: 427 DMYSKSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELP- 251
MY++ G +D A+ +F+ C R+ WN MI GY QN EA F Q+++ +
Sbjct: 263 FMYAELGCVDFAREIFD--CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXL 320
Query: 250 NSVTLASLLPACIPSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVC 71
+ VT S L A + LG+Q+H Y ++ S V + A+I MYS+C SI + KV
Sbjct: 321 DDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVF 380
Query: 70 DSIPEKNTVTYTTIILGYGQHGL 2
++ E++ VT+ T++ + Q+GL
Sbjct: 381 SNMLERDVVTWNTMVSAFVQNGL 403
Score = 121 bits (304), Expect = 3e-25
Identities = 102/382 (26%), Positives = 173/382 (45%), Gaps = 11/382 (2%)
Frame = -3
Query: 1132 MISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFPD 953
+I + S G + + ++F+++ E D++ WN+M+ + +N L +E + L ++ ++GF D
Sbjct: 363 IIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVD 422
Query: 952 QFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVF 773
T +L + + S +G+Q HA L++ + + L+DMY K
Sbjct: 423 SVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD--GYLIDMYAK----------- 469
Query: 772 QQMVEPDSTSWNIMVSGLLSAGNLEAAGKLF--NEMPHRDVVSWNTMVSAFVQNGFDGEG 599
SGL++ A +LF N RD +WN M++ + QNG EG
Sbjct: 470 ---------------SGLITT-----AQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEG 509
Query: 598 LMLVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIR---FEGMDSYLI 428
+ +M +Q + ++V + + +GKQ H + R + F G + L+
Sbjct: 510 FAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVG--TALL 567
Query: 427 DMYSKSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPN 248
DMYSKSG I A+ +F ++ VT+ MI Y Q+G E A F ML P+
Sbjct: 568 DMYSKSGAITYAENVFAETL--EKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPD 625
Query: 247 SVTLASLLPACIPSGGISLGKQI-----HGYAIRHSIDHNVFVGTALIDMYSKCASIRYA 83
SVT ++L AC +G + G +I Y I+ S +H V DM + + A
Sbjct: 626 SVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVA----DMLGRVGRVXEA 681
Query: 82 EKVCDSIPEK-NTVTYTTIILG 20
+ + E+ NT +LG
Sbjct: 682 YEFVKGLGEEGNTFRIWGSLLG 703
>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 340 bits (873), Expect = 3e-91
Identities = 185/370 (50%), Positives = 240/370 (64%), Gaps = 1/370 (0%)
Frame = -3
Query: 1108 GIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQ-KGFFPDQFTFPCI 932
G ++ A +F+ E + +WN+M+ GY +NN EAI L+ Q+++ + F D TF
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSA 328
Query: 931 LKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEPD 752
L A + + LG+Q+HA ++KS + V +LN+++ MY +C
Sbjct: 329 LTAISQLQWLELGRQLHAYILKSSTILQ-VVILNAIIVMYSRC----------------- 370
Query: 751 STSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLMLVYEMKK 572
G++ + K+F+ M RDVV+WNTMVSAFVQNG D EGLMLV+ M+K
Sbjct: 371 --------------GSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQK 416
Query: 571 QGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEGMDSYLIDMYSKSGLIDTA 392
QG ++DSV SNL++ EIGKQ HAYL RHGI+FEGMDSYLIDMY+KSGLI TA
Sbjct: 417 QGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTA 476
Query: 391 QLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTLASLLPACI 212
Q LF N ++RD TWNAMIAGY QNG EE F FR+M++ N PN+VTLAS+LPAC
Sbjct: 477 QQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACN 536
Query: 211 PSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVCDSIPEKNTVTYTT 32
P G I LGKQIHG+AIR ++ NVFVGTAL+DMYSK +I YAE V EKN+VTYTT
Sbjct: 537 PMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTT 596
Query: 31 IILGYGQHGL 2
+I YGQHG+
Sbjct: 597 MISSYGQHGM 606
Score = 145 bits (366), Expect = 2e-32
Identities = 108/383 (28%), Positives = 185/383 (48%), Gaps = 5/383 (1%)
Frame = -3
Query: 1135 RMISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFP 956
R+ +C G + A LF+ + P +LWN+++ G+ NN+ +A+ YA++
Sbjct: 43 RLSHLCR-QGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 955 -DQFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAML 779
D +TF LKACA S LG+ +H +++S S + V NSLL+MY C + +
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRI-VYNSLLNMYSTCLTEVPYL- 159
Query: 778 VFQQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEG 599
T+++ N + ++F+ M R+VV+WNTM+S +V+ E
Sbjct: 160 ---------GTAYDF--------NNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEA 202
Query: 598 LMLVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEG---MDSYLI 428
+ M + G+ V + + + + + + G F + S I
Sbjct: 203 FKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAI 262
Query: 427 DMYSKSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELP- 251
MY++ G +D A+ +F+ C R+ WN MI GY QN EA F Q+++ +
Sbjct: 263 FMYAELGCVDFAREIFD--CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVL 320
Query: 250 NSVTLASLLPACIPSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVC 71
+ VT S L A + LG+Q+H Y ++ S V + A+I MYS+C SI + KV
Sbjct: 321 DDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVF 380
Query: 70 DSIPEKNTVTYTTIILGYGQHGL 2
++ E++ VT+ T++ + Q+GL
Sbjct: 381 SNMLERDVVTWNTMVSAFVQNGL 403
Score = 122 bits (305), Expect = 2e-25
Identities = 90/343 (26%), Positives = 158/343 (46%), Gaps = 6/343 (1%)
Frame = -3
Query: 1132 MISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFPD 953
+I + S G + + ++F+++ E D++ WN+M+ + +N L +E + L + ++GF D
Sbjct: 363 IIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVD 422
Query: 952 QFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVF 773
T +L + + S +G+Q HA L++ + + + L+DMY K A +F
Sbjct: 423 SVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD--SYLIDMYAKSGLITTAQQLF 480
Query: 772 QQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLM 593
++ + D RD +WN M++ + QNG EG
Sbjct: 481 EKNSDYD-----------------------------RDEATWNAMIAGYTQNGLSEEGFA 511
Query: 592 LVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGI-RFEGMDSYLIDMYS 416
+ +M +Q + ++V + + +GKQ H + R + R + + L+DMYS
Sbjct: 512 VFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYS 571
Query: 415 KSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTL 236
KSG I A+ +F ++ VT+ MI+ Y Q+G E A F ML P+SVT
Sbjct: 572 KSGAITYAENVFAETL--EKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTF 629
Query: 235 ASLLPACIPSGGISLGKQI-----HGYAIRHSIDHNVFVGTAL 122
++L AC +G + G +I Y I+ S +H V L
Sbjct: 630 VAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADML 672
Score = 94.4 bits (233), Expect = 5e-17
Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 6/235 (2%)
Frame = -3
Query: 1132 MISICSASGIMNCASRLF--NHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFF 959
+I + + SG++ A +LF N + D WN+M+ GYT+N L EE ++ +++++
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVR 522
Query: 958 PDQFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAML 779
P+ T IL AC + + GLG+QIH ++ ++ NVFV +LLDMY K A
Sbjct: 523 PNAVTLASILPACNPMGTIGLGKQIHGFAIRC-FLNRNVFVGTALLDMYSKSGAITYAEN 581
Query: 778 VFQQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEM----PHRDVVSWNTMVSAFVQNGF 611
VF + +E +S ++ M+S G E A LF+ M D V++ ++SA G
Sbjct: 582 VFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGL 641
Query: 610 DGEGLMLVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEG 446
EGL + M+++ + S +G+ AY F G+ EG
Sbjct: 642 VDEGLRIFQSMEREYKIQPSAEHYCCVADMLG----RVGRVVEAYEFVKGLGEEG 692
>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 324 bits (831), Expect = 2e-86
Identities = 169/370 (45%), Positives = 237/370 (64%), Gaps = 1/370 (0%)
Frame = -3
Query: 1108 GIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQ-KGFFPDQFTFPCI 932
G + A ++F++ E + +WN+M+ + +NN E I L+ Q ++ + D+ T
Sbjct: 261 GCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSA 320
Query: 931 LKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEPD 752
+ A + + L +Q+HA ++K+ V+ V V+N+L+ MY +C
Sbjct: 321 ISAASHLQKFELAEQLHAFVIKNVAVTQ-VCVMNALIAMYSRCN---------------- 363
Query: 751 STSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLMLVYEMKK 572
+++ + K+F+ MP +DVVSWNTM+SAFVQNG + E LML YEMKK
Sbjct: 364 ---------------SIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKK 408
Query: 571 QGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEGMDSYLIDMYSKSGLIDTA 392
Q L++DSV S+L+N +IGKQTH YL R+GI+FEGMDSYLIDMY+KSGLI+ A
Sbjct: 409 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAA 468
Query: 391 QLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTLASLLPACI 212
Q +F + H RD TWN+M++GY QNG +++AF+ RQML +PN VTLAS+LPAC
Sbjct: 469 QNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACN 528
Query: 211 PSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVCDSIPEKNTVTYTT 32
PSG I GKQ+HG++IR+ +D NVFV TALIDMYSK SI +AE V EK+ VTY+T
Sbjct: 529 PSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYST 588
Query: 31 IILGYGQHGL 2
+ILGYGQHG+
Sbjct: 589 MILGYGQHGM 598
Score = 146 bits (369), Expect = 8e-33
Identities = 112/387 (28%), Positives = 189/387 (48%), Gaps = 9/387 (2%)
Frame = -3
Query: 1135 RMISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFP 956
R+ +C G ++ A +LF+ + P +LWN+++ G NN +EA+ Y+ + K P
Sbjct: 34 RLSRLCQ-EGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM--KSSSP 90
Query: 955 ----DQFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEA 788
D +T+ +LKACA + +G+ +HA ++ ++ + V NSLL+MY C
Sbjct: 91 QVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCL-MNPSRIVYNSLLNMYSMC----- 144
Query: 787 AMLVFQQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFD 608
PD MVSG + K+F+ M R VV+WNT+++ +V+
Sbjct: 145 ------SSTTPDGK----MVSGY---SRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERY 191
Query: 607 GEGLMLVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEGMDSYLI 428
E + M K G+ V S+L + + H L + G + D Y++
Sbjct: 192 AEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVN-DLYVV 250
Query: 427 D----MYSKSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHN 260
MY++ G ++ A+ +F+N C+ V WN MI+ + QN E F Q ++
Sbjct: 251 SSAIFMYAELGCLEFAKKVFDN-CLERNTEV-WNTMISAFVQNNFSLEGIQLFFQAVESE 308
Query: 259 ELP-NSVTLASLLPACIPSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYA 83
+ + VTL S + A L +Q+H + I++ V V ALI MYS+C SI +
Sbjct: 309 DAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTS 368
Query: 82 EKVCDSIPEKNTVTYTTIILGYGQHGL 2
K+ D++PEK+ V++ T+I + Q+GL
Sbjct: 369 FKIFDNMPEKDVVSWNTMISAFVQNGL 395
Score = 127 bits (318), Expect = 7e-27
Identities = 95/369 (25%), Positives = 176/369 (47%), Gaps = 6/369 (1%)
Frame = -3
Query: 1132 MISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFPD 953
+I++ S ++ + ++F+++ E D++ WN+M+ + +N L +EA+ L+ ++ ++ D
Sbjct: 355 LIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVD 414
Query: 952 QFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVF 773
T +L A + + + +G+Q H L+++ + + + L+DMY K EAA VF
Sbjct: 415 SVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD--SYLIDMYAKSGLIEAAQNVF 472
Query: 772 QQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLM 593
++ + RD +WN+M+S + QNG + +
Sbjct: 473 EKSFSHE-----------------------------RDQATWNSMMSGYTQNGLVDQAFL 503
Query: 592 LVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGI-RFEGMDSYLIDMYS 416
++ +M Q ++ + V + + GKQ H + R+ + + + + LIDMYS
Sbjct: 504 ILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYS 563
Query: 415 KSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTL 236
KSG I A+ +F+ + + VT++ MI GY Q+G E A F +M K P++VTL
Sbjct: 564 KSGSIAHAENVFSK--ANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTL 621
Query: 235 ASLLPACIPSGGISLGKQIHG-----YAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVC 71
++L AC +G + G QI Y I+ S +H V DM + + A +
Sbjct: 622 VAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVA----DMLGRAGRVDKAYEFV 677
Query: 70 DSIPEKNTV 44
+ EK V
Sbjct: 678 IGLGEKGNV 686
>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 324 bits (831), Expect = 2e-86
Identities = 169/370 (45%), Positives = 237/370 (64%), Gaps = 1/370 (0%)
Frame = -3
Query: 1108 GIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQ-KGFFPDQFTFPCI 932
G + A ++F++ E + +WN+M+ + +NN E I L+ Q ++ + D+ T
Sbjct: 237 GCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSA 296
Query: 931 LKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEPD 752
+ A + + L +Q+HA ++K+ V+ V V+N+L+ MY +C
Sbjct: 297 ISAASHLQKFELAEQLHAFVIKNVAVTQ-VCVMNALIAMYSRCN---------------- 339
Query: 751 STSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLMLVYEMKK 572
+++ + K+F+ MP +DVVSWNTM+SAFVQNG + E LML YEMKK
Sbjct: 340 ---------------SIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKK 384
Query: 571 QGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEGMDSYLIDMYSKSGLIDTA 392
Q L++DSV S+L+N +IGKQTH YL R+GI+FEGMDSYLIDMY+KSGLI+ A
Sbjct: 385 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAA 444
Query: 391 QLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTLASLLPACI 212
Q +F + H RD TWN+M++GY QNG +++AF+ RQML +PN VTLAS+LPAC
Sbjct: 445 QNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACN 504
Query: 211 PSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVCDSIPEKNTVTYTT 32
PSG I GKQ+HG++IR+ +D NVFV TALIDMYSK SI +AE V EK+ VTY+T
Sbjct: 505 PSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYST 564
Query: 31 IILGYGQHGL 2
+ILGYGQHG+
Sbjct: 565 MILGYGQHGM 574
Score = 145 bits (366), Expect = 2e-32
Identities = 110/378 (29%), Positives = 185/378 (48%), Gaps = 9/378 (2%)
Frame = -3
Query: 1108 GIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFP----DQFTF 941
G ++ A +LF+ + P +LWN+++ G NN +EA+ Y+ + K P D +T+
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM--KSSSPQVKCDSYTY 75
Query: 940 PCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMV 761
+LKACA + +G+ +HA ++ ++ + V NSLL+MY C
Sbjct: 76 SSVLKACADTRNLVVGKAVHAHFLRCL-MNPSRIVYNSLLNMYSMC-----------SST 123
Query: 760 EPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLMLVYE 581
PD MVSG + K+F+ M R VV+WNT+++ +V+ E +
Sbjct: 124 TPDGK----MVSGY---SRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSM 176
Query: 580 MKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGIRFEGMDSYLID----MYSK 413
M K G+ V S+L + + H L + G + D Y++ MY++
Sbjct: 177 MMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVN-DLYVVSSAIFMYAE 235
Query: 412 SGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELP-NSVTL 236
G ++ A+ +F+N C+ V WN MI+ + QN E F Q ++ + + VTL
Sbjct: 236 LGCLEFAKKVFDN-CLERNTEV-WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTL 293
Query: 235 ASLLPACIPSGGISLGKQIHGYAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVCDSIPE 56
S + A L +Q+H + I++ V V ALI MYS+C SI + K+ D++PE
Sbjct: 294 LSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPE 353
Query: 55 KNTVTYTTIILGYGQHGL 2
K+ V++ T+I + Q+GL
Sbjct: 354 KDVVSWNTMISAFVQNGL 371
Score = 127 bits (318), Expect = 7e-27
Identities = 95/369 (25%), Positives = 176/369 (47%), Gaps = 6/369 (1%)
Frame = -3
Query: 1132 MISICSASGIMNCASRLFNHVQEPDLILWNSMLKGYTRNNLFEEAIFLYAQLLQKGFFPD 953
+I++ S ++ + ++F+++ E D++ WN+M+ + +N L +EA+ L+ ++ ++ D
Sbjct: 331 LIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVD 390
Query: 952 QFTFPCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVF 773
T +L A + + + +G+Q H L+++ + + + L+DMY K EAA VF
Sbjct: 391 SVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD--SYLIDMYAKSGLIEAAQNVF 448
Query: 772 QQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLM 593
++ + RD +WN+M+S + QNG + +
Sbjct: 449 EKSFSHE-----------------------------RDQATWNSMMSGYTQNGLVDQAFL 479
Query: 592 LVYEMKKQGLLIDSVXXXXXXXXXSNLKNCEIGKQTHAYLFRHGI-RFEGMDSYLIDMYS 416
++ +M Q ++ + V + + GKQ H + R+ + + + + LIDMYS
Sbjct: 480 ILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYS 539
Query: 415 KSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVTL 236
KSG I A+ +F+ + + VT++ MI GY Q+G E A F +M K P++VTL
Sbjct: 540 KSGSIAHAENVFSK--ANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTL 597
Query: 235 ASLLPACIPSGGISLGKQIHG-----YAIRHSIDHNVFVGTALIDMYSKCASIRYAEKVC 71
++L AC +G + G QI Y I+ S +H V DM + + A +
Sbjct: 598 VAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVA----DMLGRAGRVDKAYEFV 653
Query: 70 DSIPEKNTV 44
+ EK V
Sbjct: 654 IGLGEKGNV 662
Score = 89.0 bits (219), Expect = 2e-15
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Frame = -3
Query: 721 LLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAFVQNGFDGEGLMLVYEMKKQG--LLIDSV 548
L G L A +LF+ +P V WNT++ V N F E L+ MK + DS
Sbjct: 14 LCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSY 73
Query: 547 XXXXXXXXXSNLKNCEIGKQTHAYLFR-----HGIRFEGM------------DSYLIDMY 419
++ +N +GK HA+ R I + + D ++ Y
Sbjct: 74 TYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGY 133
Query: 418 SKSGLIDTAQLLFNNNCIHNRDHVTWNAMIAGYAQNGEIEEAFIAFRQMLKHNELPNSVT 239
S+ L+ + +F+ + R V WN +IA Y + EA F M+K P+ V+
Sbjct: 134 SRCDLV---RKVFDT--MRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVS 188
Query: 238 LASLLPACIPSGGISLGKQIHGYAIRHSIDH--NVFVGTALIDMYSKCASIRYAEKVCDS 65
++ PA G +HG ++ ++ +++V ++ I MY++ + +A+KV D+
Sbjct: 189 FVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN 248
Query: 64 IPEKNTVTYTTIILGYGQH 8
E+NT + T+I + Q+
Sbjct: 249 CLERNTEVWNTMISAFVQN 267