BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023742
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    66   3e-09
ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
emb|CBI35966.3| unnamed protein product [Vitis vinifera]               65   6e-09
gb|AEP33763.1| organelle transcript processing 82, partial [Isat...    64   1e-08

>ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Glycine max]
          Length = 518

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +1

Query: 31  IHCLTLYCKMTRVGIKPDNYTYPFVINSCASLVMINEGCEIHGRVVKTGFGLYLPVSNAL 210
           +H + LY +M +  +KPDN+T+PFV+ +C  L  +N G  +HGRV++ GFG  + V N L
Sbjct: 89  VHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTL 148

Query: 211 I 213
           +
Sbjct: 149 L 149


>ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g15300-like [Glycine max]
          Length = 555

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 26/61 (42%), Positives = 39/61 (63%)
 Frame = +1

Query: 31  IHCLTLYCKMTRVGIKPDNYTYPFVINSCASLVMINEGCEIHGRVVKTGFGLYLPVSNAL 210
           +H + LY +MT   +KPDN+T+P V+ +C  L  +N G  +HGRV + GFG  + V N L
Sbjct: 89  VHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRLGFGSNVVVRNTL 148

Query: 211 I 213
           +
Sbjct: 149 L 149


>ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/61 (49%), Positives = 40/61 (65%)
 Frame = +1

Query: 40  LTLYCKMTRVGIKPDNYTYPFVINSCASLVMINEGCEIHGRVVKTGFGLYLPVSNALIDM 219
           L LY +M   GI+PDN+TYPFV+ +C+ LV + EG +IH  V K G  + + V N LI M
Sbjct: 116 LLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISM 175

Query: 220 Y 222
           Y
Sbjct: 176 Y 176


>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/61 (50%), Positives = 42/61 (68%)
 Frame = +1

Query: 40  LTLYCKMTRVGIKPDNYTYPFVINSCASLVMINEGCEIHGRVVKTGFGLYLPVSNALIDM 219
           L LY KM R   KP N+T+PFV+ +C++L  + EG +IH  V++ GFG  L V N+LIDM
Sbjct: 78  LFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDM 137

Query: 220 Y 222
           Y
Sbjct: 138 Y 138


>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = +1

Query: 31  IHCLTLYCKMTRVGIKPDNYTYPFVINSCASLVMINEGCEIHGRVVKTGFGLYLPVSNAL 210
           +  LTLY  M  +G+ P++YT+PF++ SCA      EG +IHG+V+K GF L L V  +L
Sbjct: 46  VSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSL 105

Query: 211 IDMY 222
           I MY
Sbjct: 106 ISMY 109