BLASTX nr result

ID: Coptis25_contig00023735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023735
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...   112   8e-23
ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...   111   1e-22
ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycin...   107   2e-21
ref|XP_003624395.1| hypothetical protein MTR_7g082730 [Medicago ...   105   7e-21
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]   102   6e-20

>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  112 bits (279), Expect = 8e-23
 Identities = 60/135 (44%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
 Frame = -3

Query: 577 MEIISYPFNGSLKXXXXXXXXXRLDGAVTG-KNMKVARLGGKRKSFWRVRTIPKLKWGFK 401
           ME+    FNGS K         RLDGA+T  KN  VAR GG  +  W+++ +PKL+    
Sbjct: 1   MELAPSFFNGSWKRYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKN 60

Query: 400 IVSPIKLLRKVRDAYMNMMLGLAGNVGYLNGDNFFGGKRIPKARTISKASKVEEFETKLI 221
           I SP KLLRK+++AY++M+L +AGN    +G + FG KR+P+ R +  A   E FE +L+
Sbjct: 61  IASPTKLLRKLKNAYISMILSVAGNA---DGTHVFGDKRVPRGRQVKAAYPSEAFEKRLV 117

Query: 220 FEIYKALMASRELAS 176
           +EIYK L+A+REL++
Sbjct: 118 YEIYKNLLATRELST 132


>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  111 bits (278), Expect = 1e-22
 Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
 Frame = -3

Query: 577 MEIISYPFNGSLKXXXXXXXXXRLDGAVTG-KNMKVARLGGKRKSFWRVRTIPKLKWGFK 401
           ME+    F GS K         R DGA+T  KN+KV R GG  +  W+++ +PKL+    
Sbjct: 1   MELAPRSFYGSWKRYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKS 60

Query: 400 IVSPIKLLRKVRDAYMNMMLGLAGNVGYLNGDNFFGGKRIPKARTISKAS-KVEEFETKL 224
           I SP+KL+ K+++AY+NMMLG+AGNV   +G N FG +R+P+ R +   +   E FE +L
Sbjct: 61  IASPLKLMSKLKNAYINMMLGMAGNV---DGTNVFGNRRVPRGRQVKAPNYPSEAFEKRL 117

Query: 223 IFEIYKALMASRELAS 176
           ++EIYK L+A+REL++
Sbjct: 118 VYEIYKNLLATRELST 133


>ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycine max]
           gi|255629003|gb|ACU14846.1| unknown [Glycine max]
          Length = 135

 Score =  107 bits (267), Expect = 2e-21
 Identities = 54/105 (51%), Positives = 74/105 (70%)
 Frame = -3

Query: 496 VTGKNMKVARLGGKRKSFWRVRTIPKLKWGFKIVSPIKLLRKVRDAYMNMMLGLAGNVGY 317
           V  + M + RL G R+ +WR+R +P+L+W  +  SP+ +L K+++AYMN ML L+GNVG 
Sbjct: 31  VVRRKMAIIRLRGPRR-YWRIRAVPRLRWVMR--SPLTILTKLKNAYMNFMLKLSGNVGA 87

Query: 316 LNGDNFFGGKRIPKARTISKASKVEEFETKLIFEIYKALMASREL 182
           +N DN F  KRIPKAR +SK    +EFE +LIFEI K L+AS EL
Sbjct: 88  MNSDNIFEVKRIPKARQVSKGYSRDEFEARLIFEISKTLVASYEL 132


>ref|XP_003624395.1| hypothetical protein MTR_7g082730 [Medicago truncatula]
           gi|355499410|gb|AES80613.1| hypothetical protein
           MTR_7g082730 [Medicago truncatula]
          Length = 213

 Score =  105 bits (262), Expect = 7e-21
 Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = -3

Query: 487 KNMKVARLGGKRKSFWRVRTIPKLKWGFKIVSPIKLLRKVRDAYMNMMLGLAGNVG-YLN 311
           K M+V R+   R+  W++RT PKL+W   I SP+KLL KV++ YMN ML LAGNVG  LN
Sbjct: 26  KKMQVIRMRSPRRD-WKIRTSPKLRW--MIRSPLKLLTKVKNTYMNFMLKLAGNVGGALN 82

Query: 310 GDNFFGGKRIPKARTISKASKVEEFETKLIFEIYKALMASRELAS 176
            DN FG KRIPKAR +SK    + FE +LIFEI K L+AS EL S
Sbjct: 83  TDNKFGMKRIPKARQVSKGYSGDAFEARLIFEISKTLVASHELYS 127



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = -3

Query: 385 KLLRKVRDAYMNMMLGLAGNVG-YLNGDNFFGGKRIPKARTISKASKVEEFETKLIF 218
           K++ K+++ YMN ML LAGNVG  LN DN FG KRIPKAR +SK    + FE +LIF
Sbjct: 157 KMVTKIKNTYMNFMLKLAGNVGGALNTDNKFGVKRIPKARQVSKGYSGDAFEARLIF 213


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score =  102 bits (254), Expect = 6e-20
 Identities = 56/115 (48%), Positives = 77/115 (66%)
 Frame = -3

Query: 577 MEIISYPFNGSLKXXXXXXXXXRLDGAVTGKNMKVARLGGKRKSFWRVRTIPKLKWGFKI 398
           MEI+S+  +             RLD A   +N+K+ RLGGK++ FWR+R IPKL    KI
Sbjct: 1   MEILSFQKSFGFGRHWRRGKYQRLDVA-NKRNVKMVRLGGKQRRFWRIRQIPKLH--LKI 57

Query: 397 VSPIKLLRKVRDAYMNMMLGLAGNVGYLNGDNFFGGKRIPKARTISKASKVEEFE 233
           +SP+KLL K+++AY++MML L+G+VG LN  N FGGKR+PKAR +  A   EEF+
Sbjct: 58  ISPLKLLAKLKNAYVSMMLNLSGSVGALNSGNVFGGKRVPKARQVPIAYSNEEFD 112


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