BLASTX nr result
ID: Coptis25_contig00023723
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023723 (790 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003589709.1| Pre-mRNA-splicing factor spp2 [Medicago trun... 108 2e-21 ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis] gi... 108 2e-21 ref|XP_003556598.1| PREDICTED: protein MOS2-like, partial [Glyci... 103 3e-20 ref|XP_003529331.1| PREDICTED: protein MOS2-like [Glycine max] 101 2e-19 ref|XP_002276861.1| PREDICTED: protein MOS2-like [Vitis vinifera] 101 2e-19 >ref|XP_003589709.1| Pre-mRNA-splicing factor spp2 [Medicago truncatula] gi|355478757|gb|AES59960.1| Pre-mRNA-splicing factor spp2 [Medicago truncatula] Length = 385 Score = 108 bits (269), Expect = 2e-21 Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 6/129 (4%) Frame = -2 Query: 585 PETQTHQPNLIIQPLPNTWKPNPNSTSYGLNIRPKK------EVVGKKPTNNVALELKLL 424 P T +H + + T P+++SYGLN+R +VV P ++E+ +L Sbjct: 7 PITDSHSDHSLTFVPDTTVSDQPDNSSYGLNLRDNDKKPQSDDVVVDAPRPKASVEVSML 66 Query: 423 EKFRDDIKKFPDDKGLEEFIGVPVNGYGKAVLAGYGWYEGRGIGKNAERDVKVVQYRGVF 244 +KF+DD+++ PDD G +E+ VPV G+G A+L GYGW EG GIGKNA+ DVKVV+ + Sbjct: 67 QKFKDDMERLPDDMGFDEYKDVPVEGFGAALLGGYGWKEGMGIGKNAKEDVKVVEVKR-R 125 Query: 243 EGKAGLGFI 217 GK GLGF+ Sbjct: 126 TGKEGLGFV 134 >ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis] gi|223537810|gb|EEF39428.1| Protein MOS2, putative [Ricinus communis] Length = 479 Score = 108 bits (269), Expect = 2e-21 Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 39/169 (23%) Frame = -2 Query: 606 EFITEFNP-ETQTHQPNLIIQPLPNTWKPNPN---------------------------- 514 +F+TEF+P +T T Q +II P N W+P+ Sbjct: 37 QFVTEFDPSKTLTKQNRIIIPPKENEWRPHKKMKNLALLPSLQSSDPDALRFEIATDADD 96 Query: 513 ----STSYGLNIRPKKEVVG------KKPTNNVALELKLLEKFRDDIKKFPDDKGLEEFI 364 S SYGLN+R E G KKP + E +LEK R D+++ P+D+G +EF Sbjct: 97 GDDKSMSYGLNVRAAGEDDGGKSQQQKKPEST---ENIMLEKLRYDLERLPEDRGFDEFK 153 Query: 363 GVPVNGYGKAVLAGYGWYEGRGIGKNAERDVKVVQYRGVFEGKAGLGFI 217 VPV G+G A+LAGYGW EGRGIG+NA+ DVKV QY + K GLGF+ Sbjct: 154 DVPVEGFGAALLAGYGWREGRGIGRNAKEDVKVKQYTKRTD-KEGLGFV 201 >ref|XP_003556598.1| PREDICTED: protein MOS2-like, partial [Glycine max] Length = 431 Score = 103 bits (258), Expect = 3e-20 Identities = 64/166 (38%), Positives = 83/166 (50%), Gaps = 38/166 (22%) Frame = -2 Query: 600 ITEFNPE--TQTHQPNLIIQPLPNTWKP---------------------------NPNST 508 ITEF+P T P +I P+ N W+P P S Sbjct: 10 ITEFDPSKPAPTSAPKTLIPPIQNQWQPFKKMKNLHLPTAADAESLAFELHTDGDQPESD 69 Query: 507 -SYGLNIRPKKEVVGKK--------PTNNVALELKLLEKFRDDIKKFPDDKGLEEFIGVP 355 SYGLN+R K G P V LE L+K + D+++ P+D+G+EEF V Sbjct: 70 ISYGLNVRADKNPEGNNKDDSDGAAPRRRVPLEATALQKLKSDLERLPEDQGMEEFKDVA 129 Query: 354 VNGYGKAVLAGYGWYEGRGIGKNAERDVKVVQYRGVFEGKAGLGFI 217 V GYG A+LAGYGW EG GIG+NA+ DVKVV+ + K GLGF+ Sbjct: 130 VEGYGAALLAGYGWKEGMGIGRNAKEDVKVVEIKR-RTAKEGLGFV 174 >ref|XP_003529331.1| PREDICTED: protein MOS2-like [Glycine max] Length = 477 Score = 101 bits (252), Expect = 2e-19 Identities = 63/166 (37%), Positives = 82/166 (49%), Gaps = 38/166 (22%) Frame = -2 Query: 600 ITEFNPE--TQTHQPNLIIQPLPNTWKP---------------------------NPNST 508 ITEF+P T P +I P+ N W+P P S Sbjct: 55 ITEFDPSKPAPTSVPKTLIPPIQNQWQPFKKMKNLHLPTAADVESLAFELHTDGDQPESD 114 Query: 507 -SYGLNIRPKKEVVGKK--------PTNNVALELKLLEKFRDDIKKFPDDKGLEEFIGVP 355 SYGLN+R G P V LE L+K + D+++ P+D+G+EEF V Sbjct: 115 ISYGLNVRADNNPEGNNKDDSDAAAPRRRVPLEATALQKLKSDLERLPEDQGMEEFKDVA 174 Query: 354 VNGYGKAVLAGYGWYEGRGIGKNAERDVKVVQYRGVFEGKAGLGFI 217 V GYG A+LAGYGW EG GIG+NA+ DVKVV+ + K GLGF+ Sbjct: 175 VEGYGAALLAGYGWKEGMGIGRNAKEDVKVVEIKR-RTAKEGLGFV 219 >ref|XP_002276861.1| PREDICTED: protein MOS2-like [Vitis vinifera] Length = 422 Score = 101 bits (252), Expect = 2e-19 Identities = 61/168 (36%), Positives = 84/168 (50%), Gaps = 37/168 (22%) Frame = -2 Query: 612 RIEFITEFNPE---TQTHQPNLIIQPLPNTWKPNP------------------------- 517 R E++TEF+ T LI+ P N W+P Sbjct: 30 RHEYVTEFDASKTLADTQTKRLIVPPKENEWRPEKKMKNLDLPLQSTTESTDIRFELESS 89 Query: 516 ------NSTSYGLNIRPKKEV---VGKKPTNNVALELKLLEKFRDDIKKFPDDKGLEEFI 364 +S SYGLNIR + V + ++E LL+K + D+++ PDD+ LE+F Sbjct: 90 DAAAGDSSVSYGLNIRENSKSENEVAAASHPDESVEATLLKKLKQDLRRLPDDQTLEDFA 149 Query: 363 GVPVNGYGKAVLAGYGWYEGRGIGKNAERDVKVVQYRGVFEGKAGLGF 220 VPV G+G A+LAGYGW EGRGIG+NA+ DVK+V+Y F K G F Sbjct: 150 EVPVEGFGAALLAGYGWTEGRGIGRNAKEDVKIVEYNRSF-AKQGFAF 196