BLASTX nr result

ID: Coptis25_contig00023710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023710
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281022.2| PREDICTED: G-type lectin S-receptor-like ser...    63   3e-08
emb|CAN63413.1| hypothetical protein VITISV_003688 [Vitis vinifera]    59   3e-07
ref|XP_002332644.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002332643.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
emb|CAN73738.1| hypothetical protein VITISV_036172 [Vitis vinifera]    55   6e-06

>ref|XP_002281022.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At4g27290-like [Vitis vinifera]
          Length = 1081

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = +3

Query: 96  GVLHLVMFYSFTFSLFYQEIHIAAYTLTPSQSIIDGQTLISKGAIFELGFFSPSNSKDRY 275
           G+     F S   S  + +  +A+ T+TP+QS++DG+TL+S G  FELGFFSP NSK+RY
Sbjct: 3   GLPFFTFFCSLISSSIFLKFCVASDTITPTQSMVDGETLVSSGQRFELGFFSPENSKNRY 62


>emb|CAN63413.1| hypothetical protein VITISV_003688 [Vitis vinifera]
          Length = 763

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +3

Query: 93  MGVLHLVMF-YSFTFSLFYQEIHIAAYTLTPSQSIIDGQTLISKGAIFELGFFSPSNSKD 269
           M  L  V+F +S+ FSL    I IA  T+T +Q I DG+T+ S G  FELGFFSP NSK+
Sbjct: 1   MNALRTVVFVFSYVFSLI--RISIAVDTITVNQHIRDGETITSAGGTFELGFFSPGNSKN 58

Query: 270 RY 275
           RY
Sbjct: 59  RY 60


>ref|XP_002332644.1| predicted protein [Populus trichocarpa] gi|222832839|gb|EEE71316.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +3

Query: 99  VLHLVMFYSFTFSLFYQEIHIAAYTLTPSQSIIDGQTLISKGAIFELGFFSPSNSKDRY 275
           +L L +F + +F +F  +   A  T+ PSQS+IDG+TL+S+   FELGFFSP  SK+RY
Sbjct: 12  ILSLTLF-NISFLIFQLKFSTALDTIAPSQSLIDGKTLVSREGSFELGFFSPGISKNRY 69


>ref|XP_002332643.1| predicted protein [Populus trichocarpa] gi|222832838|gb|EEE71315.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/59 (47%), Positives = 40/59 (67%)
 Frame = +3

Query: 99  VLHLVMFYSFTFSLFYQEIHIAAYTLTPSQSIIDGQTLISKGAIFELGFFSPSNSKDRY 275
           +L L +F + +F +F  +   A  T+ PSQS+ DG+TL+S+   FELGFFSP  SK+RY
Sbjct: 12  ILSLTLFNT-SFLIFQLKFSTALDTIAPSQSLSDGKTLVSREGSFELGFFSPGISKNRY 69


>emb|CAN73738.1| hypothetical protein VITISV_036172 [Vitis vinifera]
          Length = 677

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = +3

Query: 108 LVMFYSFTFSLFYQEIHIAAYTLTPSQSIIDGQTLISKGAIFELGFFSPSNSKDRY 275
           LV+ + + FS+    I  A  T+T +Q I DG+T++S G  FELGFF P NSK+RY
Sbjct: 7   LVVLFFYVFSIL--RISTAVDTITANQQIKDGETIVSAGGSFELGFFHPGNSKNRY 60


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