BLASTX nr result

ID: Coptis25_contig00023708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023708
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]    187   1e-45
emb|CBI27227.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus commun...   185   3e-45
ref|XP_004170496.1| PREDICTED: DNA polymerase eta-like [Cucumis ...   181   4e-44
gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabid...   181   4e-44

>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/104 (82%), Positives = 96/104 (92%)
 Frame = +1

Query: 25  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGALIAVGYEAR 204
           MP+++PE SDAR+IAH+DMDCFYVQVEQRKQP+LRGLPTAV+QYN+WKGG LIAV YEAR
Sbjct: 1   MPVAKPESSDARIIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEAR 60

Query: 205 SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEV 336
            FGVKRSMRGDEAK  CPQI LVQVPVAR KADL++YRNAGSEV
Sbjct: 61  KFGVKRSMRGDEAKQVCPQIQLVQVPVARGKADLNVYRNAGSEV 104


>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/104 (82%), Positives = 96/104 (92%)
 Frame = +1

Query: 25  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGALIAVGYEAR 204
           MP+++PE SDAR+IAH+DMDCFYVQVEQRKQP+LRGLPTAV+QYN+WKGG LIAV YEAR
Sbjct: 1   MPVAKPESSDARIIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEAR 60

Query: 205 SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEV 336
            FGVKRSMRGDEAK  CPQI LVQVPVAR KADL++YRNAGSEV
Sbjct: 61  KFGVKRSMRGDEAKQVCPQIQLVQVPVARGKADLNVYRNAGSEV 104


>ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus communis]
           gi|223532448|gb|EEF34241.1| DNA polymerase eta, putative
           [Ricinus communis]
          Length = 560

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/104 (83%), Positives = 95/104 (91%)
 Frame = +1

Query: 25  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGALIAVGYEAR 204
           MP++RPE SD+R+IAHVDMDCFYVQVEQRKQP+LRGLPTAV+QYN WKGG LIAV YEAR
Sbjct: 1   MPVARPESSDSRIIAHVDMDCFYVQVEQRKQPQLRGLPTAVVQYNEWKGGGLIAVSYEAR 60

Query: 205 SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEV 336
            FGVKRSMRGDEAK  CPQI LVQVPVAR KADL++YRNAGSEV
Sbjct: 61  KFGVKRSMRGDEAKEVCPQILLVQVPVARGKADLNVYRNAGSEV 104


>ref|XP_004170496.1| PREDICTED: DNA polymerase eta-like [Cucumis sativus]
          Length = 557

 Score =  181 bits (460), Expect = 4e-44
 Identities = 85/104 (81%), Positives = 93/104 (89%)
 Frame = +1

Query: 25  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGALIAVGYEAR 204
           MP+++PE SD R+IAHVDMDCFYVQVEQRKQP LRGLPTAV+QYN+WKGG LIAVGYEAR
Sbjct: 1   MPVAKPESSDVRIIAHVDMDCFYVQVEQRKQPCLRGLPTAVVQYNSWKGGGLIAVGYEAR 60

Query: 205 SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEV 336
            FGVKRSMRGDEAK  CPQI L+QVPVAR KADL  YR+AGSEV
Sbjct: 61  KFGVKRSMRGDEAKKVCPQIQLIQVPVARGKADLKTYRDAGSEV 104


>gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabidopsis thaliana]
           gi|9758378|dbj|BAB08827.1| DNA-damage-inducible protein
           P [Arabidopsis thaliana]
          Length = 689

 Score =  181 bits (460), Expect = 4e-44
 Identities = 87/104 (83%), Positives = 95/104 (91%)
 Frame = +1

Query: 25  MPISRPEPSDARVIAHVDMDCFYVQVEQRKQPELRGLPTAVIQYNAWKGGALIAVGYEAR 204
           MP++RPE SDARVIAHVDMDCFYVQVEQRKQPELRGLP+AV+QYN W+GG LIAV YEAR
Sbjct: 1   MPVARPEASDARVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEAR 60

Query: 205 SFGVKRSMRGDEAKNACPQIHLVQVPVARNKADLSIYRNAGSEV 336
             GVKRSMRGDEAK ACPQI LVQVPVAR KADL++YR+AGSEV
Sbjct: 61  KCGVKRSMRGDEAKAACPQIQLVQVPVARGKADLNLYRSAGSEV 104


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