BLASTX nr result

ID: Coptis25_contig00023707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023707
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]               99   6e-19
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    98   2e-18
ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812...    71   2e-10

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 76/216 (35%), Positives = 100/216 (46%), Gaps = 17/216 (7%)
 Frame = +3

Query: 48  KLPMQTSNVS-----------PVGFPSPQQGNHQIGTVSDHYLGVPSRAASTTIFNRSPD 194
           KLP+ +S+V+           P G  S   G  +  +  D    V S  A +T  + +  
Sbjct: 113 KLPVYSSSVTVSTAGSGVPHAPTGSLSENLGYQKPRSGMDFCPIVSSTTAVSTNCSSTSV 172

Query: 195 LQGSYQMANL-IRSSETDQTGPHPIVRGNEIGADLLYPVQGWLSSSSSAV-----GRNIQ 356
           L  + Q ANL ++SS+  +   H +V  NE   +      GW  ++ SA      G NI 
Sbjct: 173 LHDALQAANLNLQSSDLAKATIHHMVPRNEKVREFSSLKGGWPVNTGSANFGKLHGTNIH 232

Query: 357 ASSNEPICTISAASDQASTFTKGRVLVFCLATXXXXXXXXXXXXXXXXXXXXXQMSVSKF 536
           AS   P    S+  D  +TFT G   VFC  T                      MSVSKF
Sbjct: 233 ASQKRPSEASSSLCDHQATFTSGCPRVFCFGTSGDLLLSNTGLLGVVCLCHCWHMSVSKF 292

Query: 537 CEHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYGV 644
           CEHS    VNPGDAVR+ SGETIAQWR+ YF K+G+
Sbjct: 293 CEHSELRDVNPGDAVRMDSGETIAQWRKQYFQKFGI 328


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
           gi|223540952|gb|EEF42510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 903

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
 Frame = +3

Query: 48  KLPMQTS-NVSPVGFPSP--------QQGNHQ-IGTVSDHYLGVPSRAASTTIFNRSPDL 197
           KLP+++S  VSP G   P        + G++Q + + +D    + SRA +T+ F  +   
Sbjct: 97  KLPIESSIAVSPTGSQIPPTSSWKPSENGSYQNMQSGADLCPLISSRATTTSNFGSNSVF 156

Query: 198 QGSYQMANL-IRSSETDQTGPHPIVRGNEIGADLLYPVQGWLSSSSSAVGRNIQASSNE- 371
                 A++ ++ S+  +T  H  V GNE   D  Y ++G L + S A    +Q  +N+ 
Sbjct: 157 PNGLPAASISLQGSDLAKTVLHDAVLGNEKLKDFTY-LRGELHNISDANAIKLQNVNNQM 215

Query: 372 ----PICTISAASDQASTFTKGRVLVFCLATXXXXXXXXXXXXXXXXXXXXXQMSVSKFC 539
               P+   S+AS  +S F  G   VFC+                        MSVSKFC
Sbjct: 216 PQKLPLAAESSASINSSRFPSGCPRVFCMDRSGDLLLSNTGLLGILCSCHCFHMSVSKFC 275

Query: 540 EHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYGV 644
           EHSG   +NPGDA+ + SGETIAQWR++YF K+G+
Sbjct: 276 EHSGLWNINPGDAIHMDSGETIAQWRKLYFQKFGI 310


>ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812602 [Glycine max]
          Length = 1985

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
 Frame = +3

Query: 237 ETDQTGPHPIVRGNEIGADLLYPVQGWLSSSSSAVGRNIQASSNEPICTIS---AASDQA 407
           ++  T   P + G+E   +  +   G    +  A   N+  S  +   TI+   ++S  A
Sbjct: 116 QSSNTAIQPPIPGSEKARES-FSSPGQCQGTIPASSLNVCCSDIQTTQTIALEPSSSKYA 174

Query: 408 STFTKGRVLVFCLATXXXXXXXXXXXXXXXXXXXXXQMSVSKFCEHSGSCIVNPGDAVRL 587
           + F  G   VFC+                        MSV KFCEHSG   ++PG+AVR+
Sbjct: 175 TPFMSGCPRVFCMGKSGHLLLSNTGLLGIVCSCHCCHMSVLKFCEHSGLHGIDPGEAVRM 234

Query: 588 KSGETIAQWRRIYFPKYGVLASG 656
           +SGETI+QW+++YF K+G+ + G
Sbjct: 235 ESGETISQWQKLYFLKFGIRSLG 257


Top