BLASTX nr result
ID: Coptis25_contig00023704
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023704 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 129 2e-28 emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] 129 3e-28 emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera] 128 4e-28 gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy... 127 7e-28 gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 127 7e-28 >gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] Length = 1475 Score = 129 bits (325), Expect = 2e-28 Identities = 58/80 (72%), Positives = 70/80 (87%) Frame = +1 Query: 7 LCRLYIREIVRLHGVPVSIVSDRDSQFTSRFWKSFQKVLGTTLDLSTAFHPQTNGQTERV 186 L R+YIRE+VRLHGVPVSI+SDR SQFTS FW++FQ LGT +DLSTAFHPQT+GQ+ER Sbjct: 1306 LARIYIREVVRLHGVPVSIISDRGSQFTSNFWRTFQDELGTRVDLSTAFHPQTDGQSERT 1365 Query: 187 NQILEDMLRACILDFKGGWE 246 Q+LEDMLRAC++DF G W+ Sbjct: 1366 IQVLEDMLRACVMDFGGQWD 1385 >emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] Length = 1387 Score = 129 bits (323), Expect = 3e-28 Identities = 59/81 (72%), Positives = 71/81 (87%) Frame = +1 Query: 1 DDLCRLYIREIVRLHGVPVSIVSDRDSQFTSRFWKSFQKVLGTTLDLSTAFHPQTNGQTE 180 + L +LYI+EIVRLHG+PVSIVSDRD +FTS+FW+S Q+ LGT L+ STAFHPQT+GQ+E Sbjct: 1079 NSLAKLYIQEIVRLHGIPVSIVSDRDPKFTSQFWQSLQRTLGTQLNFSTAFHPQTDGQSE 1138 Query: 181 RVNQILEDMLRACILDFKGGW 243 RV QILEDMLRAC+LDF G W Sbjct: 1139 RVIQILEDMLRACVLDFGGNW 1159 >emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera] Length = 362 Score = 128 bits (322), Expect = 4e-28 Identities = 59/82 (71%), Positives = 69/82 (84%) Frame = +1 Query: 1 DDLCRLYIREIVRLHGVPVSIVSDRDSQFTSRFWKSFQKVLGTTLDLSTAFHPQTNGQTE 180 D L LY++EIVR+HGVPVSIVSDRD +FTSRFW S QK LGT L STAFHPQT+GQ+E Sbjct: 59 DRLASLYVKEIVRMHGVPVSIVSDRDPRFTSRFWHSLQKALGTKLSFSTAFHPQTDGQSE 118 Query: 181 RVNQILEDMLRACILDFKGGWE 246 RV Q+LED+LRACILD +G W+ Sbjct: 119 RVIQVLEDLLRACILDLQGNWD 140 >gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa] gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica Group] gi|31431495|gb|AAP53268.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1230 Score = 127 bits (320), Expect = 7e-28 Identities = 57/80 (71%), Positives = 69/80 (86%) Frame = +1 Query: 7 LCRLYIREIVRLHGVPVSIVSDRDSQFTSRFWKSFQKVLGTTLDLSTAFHPQTNGQTERV 186 L +LY++EIV LHGVPV IVSDRD++F S+FWKS + GT LD STA+HPQT+GQTERV Sbjct: 909 LAKLYVKEIVSLHGVPVRIVSDRDTRFLSKFWKSLHRAPGTKLDFSTAYHPQTDGQTERV 968 Query: 187 NQILEDMLRACILDFKGGWE 246 NQI+EDMLR+CIL+FKG WE Sbjct: 969 NQIIEDMLRSCILEFKGSWE 988 >gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] Length = 923 Score = 127 bits (320), Expect = 7e-28 Identities = 57/78 (73%), Positives = 68/78 (87%) Frame = +1 Query: 13 RLYIREIVRLHGVPVSIVSDRDSQFTSRFWKSFQKVLGTTLDLSTAFHPQTNGQTERVNQ 192 +LY+ EIVRLHGVPVSIVSDRD++FTS+FWK Q +GT LD STAFHPQT+GQTER+NQ Sbjct: 620 QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQ 679 Query: 193 ILEDMLRACILDFKGGWE 246 +LEDMLRAC L+F G W+ Sbjct: 680 VLEDMLRACALEFPGSWD 697