BLASTX nr result

ID: Coptis25_contig00023702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023702
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +3

Query: 150 EKIKWIPIWMKL-DFSK*LWAEKGISHVTSLLGNPTCLDEATAMKGRLSFANACMEVDFE 326
           E++K  PIW+KL +    LW+ + +  + SL+G P   D  TA +  L FA  C+EVDF+
Sbjct: 120 EELKSAPIWIKLPNLRLHLWSPEALGKIVSLVGRPLFADTVTASRETLCFARVCVEVDFD 179

Query: 327 YIFHTSVKVNLDRG 368
            +   S+ +  D+G
Sbjct: 180 KMLPDSITIEDDKG 193


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +3

Query: 150 EKIKWIPIWMKL-DFSK*LWAEKGISHVTSLLGNPTCLDEATAMKGRLSFANACMEVDFE 326
           +++K  P+W+KL +    LW+ + +S + SL+G P   D  TA +  L FA  C+EVDF+
Sbjct: 120 KELKSAPVWIKLPNLRLHLWSPEALSKIASLVGRPLFADTVTASRETLCFARVCVEVDFD 179

Query: 327 YIFHTSVKVNLDRG 368
            +   SV +  D+G
Sbjct: 180 KMLPDSVTIEDDKG 193


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +3

Query: 150 EKIKWIPIWMKL-DFSK*LWAEKGISHVTSLLGNPTCLDEATAMKGRLSFANACMEVDFE 326
           +++K  PIW+KL +    LW+ + +  + SL+G P   D  TA +  L FA  C+EVDF+
Sbjct: 120 KELKSAPIWIKLPNLRLHLWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFD 179

Query: 327 YIFHTSVKVNLDRG 368
            +   SV +  D+G
Sbjct: 180 KMLPDSVTIEDDKG 193


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