BLASTX nr result
ID: Coptis25_contig00023690
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023690 (1122 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arab... 43 5e-07 ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arab... 44 9e-07 ref|XP_003606393.1| YrdC domain-containing protein [Medicago tru... 41 1e-06 ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-conta... 43 2e-06 ref|NP_568924.1| DHBP synthase RibB-like alpha/beta domain-conta... 43 3e-06 >ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arabidopsis lyrata subsp. lyrata] gi|297325130|gb|EFH55550.1| hypothetical protein ARALYDRAFT_482017 [Arabidopsis lyrata subsp. lyrata] Length = 263 Score = 43.1 bits (100), Expect(2) = 5e-07 Identities = 38/126 (30%), Positives = 53/126 (42%), Gaps = 3/126 (2%) Frame = +1 Query: 358 MSISSKAVEK*PVFNFCFTCSLSSRAIPSLRF---ALH*NKRYFGGFLCKKMLWESRRCD 528 M++S++ EK P + + + + LRF A H + +G L KKM+W R + Sbjct: 1 MNLSTRLAEKLPGILPAPSSPILRKGVSELRFFSIANHSRRLRWG--LQKKMVWSLERAE 58 Query: 529 ISVVMKIAVEKKGVIVPGKEEFADNXXXXXXXXXXXXVPPDTLYGXXXXXXXXXXXXVNR 708 VV + + P E +A VP DTLYG VNR Sbjct: 59 TCVVSNSCL-----VHPATEAYAQEAIEAIKSDKVIAVPTDTLYGFACDACSLEA--VNR 111 Query: 709 IYEIKG 726 IYEIKG Sbjct: 112 IYEIKG 117 Score = 37.7 bits (86), Expect(2) = 5e-07 Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%) Frame = +2 Query: 725 VGVVFDIECFAVT--LPRGLPDNLLPGPLTVVI 817 VG VFDI+ A T LP GL D+LLPGP+T+V+ Sbjct: 128 VGDVFDIKRVATTNHLPHGLLDSLLPGPVTLVL 160 >ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp. lyrata] gi|297310528|gb|EFH40952.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp. lyrata] Length = 284 Score = 43.9 bits (102), Expect(2) = 9e-07 Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Frame = +1 Query: 358 MSISSKAVEK*PVFNFCFTCSLSSRAIPSLR-FALH*NKRYFGGFLCKKMLWESRRCDIS 534 M++S++ EK P + L + I LR F++ + R L KKM+W R + Sbjct: 1 MNLSTRLAEKLPGILPAPSSPLLRKGISELRCFSIANHSRRLRWGLQKKMVWSLERAETC 60 Query: 535 VVMKIAVEKKGVIVPGKEEFADNXXXXXXXXXXXXVPPDTLYGXXXXXXXXXXXXVNRIY 714 VV + + P E +A VP DTLYG VNRIY Sbjct: 61 VVSNSCL-----VHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEA--VNRIY 113 Query: 715 EIKG 726 EIKG Sbjct: 114 EIKG 117 Score = 36.2 bits (82), Expect(2) = 9e-07 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 2/33 (6%) Frame = +2 Query: 725 VGVVFDIECFAVT--LPRGLPDNLLPGPLTVVI 817 VG V DI+ A T LP GL D+LLPGP+T+V+ Sbjct: 128 VGDVLDIKRVATTNHLPHGLLDSLLPGPVTIVL 160 >ref|XP_003606393.1| YrdC domain-containing protein [Medicago truncatula] gi|355507448|gb|AES88590.1| YrdC domain-containing protein [Medicago truncatula] Length = 462 Score = 40.8 bits (94), Expect(2) = 1e-06 Identities = 26/75 (34%), Positives = 32/75 (42%) Frame = +1 Query: 502 MLWESRRCDISVVMKIAVEKKGVIVPGKEEFADNXXXXXXXXXXXXVPPDTLYGXXXXXX 681 M W RCD+ + +K GV+ P + +A VP DTLYG Sbjct: 1 MAWSMERCDLGLDVKT-----GVVHPATDAYAAEAVETLKAGKVIAVPTDTLYG--FACD 53 Query: 682 XXXXXXVNRIYEIKG 726 VNRIYEIKG Sbjct: 54 ACSLEAVNRIYEIKG 68 Score = 38.5 bits (88), Expect(2) = 1e-06 Identities = 21/33 (63%), Positives = 25/33 (75%), Gaps = 2/33 (6%) Frame = +2 Query: 725 VGVVFDIECFAVT--LPRGLPDNLLPGPLTVVI 817 VG V DI FA+T LP GL D+LLPGP+TVV+ Sbjct: 79 VGDVSDINRFALTDHLPHGLLDSLLPGPVTVVL 111 >ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-containing protein [Arabidopsis thaliana] gi|332009969|gb|AED97352.1| DHBP synthase RibB-like alpha/beta domain-containing protein [Arabidopsis thaliana] Length = 288 Score = 43.1 bits (100), Expect(2) = 2e-06 Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Frame = +1 Query: 358 MSISSKAVEK*PVFNFCFTCSLSSRAIPSLR-FALH*NKRYFGGFLCKKMLWESRRCDIS 534 M++S++ EK P + L + + LR F++ R L KKM+W R + Sbjct: 1 MNLSTRLAEKLPGILPAPSSPLLRKGVSELRCFSIANQSRRLRWGLQKKMVWSLERAETC 60 Query: 535 VVMKIAVEKKGVIVPGKEEFADNXXXXXXXXXXXXVPPDTLYGXXXXXXXXXXXXVNRIY 714 VV K + + P E +A VP DTLYG V+RIY Sbjct: 61 VVSKSCL-----VHPATEAYAQEAIEAIKSEKVIAVPTDTLYG--FACDACSLEAVSRIY 113 Query: 715 EIKG 726 EIKG Sbjct: 114 EIKG 117 Score = 35.4 bits (80), Expect(2) = 2e-06 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 2/33 (6%) Frame = +2 Query: 725 VGVVFDIECFAVT--LPRGLPDNLLPGPLTVVI 817 VG V DI+ A T LP GL D+LLPGP+T+V+ Sbjct: 128 VGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVL 160 >ref|NP_568924.1| DHBP synthase RibB-like alpha/beta domain-containing protein [Arabidopsis thaliana] gi|14190379|gb|AAK55670.1|AF378867_1 AT5g60590/muf9_240 [Arabidopsis thaliana] gi|15215871|gb|AAK91479.1| AT5g60590/muf9_240 [Arabidopsis thaliana] gi|332009968|gb|AED97351.1| DHBP synthase RibB-like alpha/beta domain-containing protein [Arabidopsis thaliana] Length = 164 Score = 43.1 bits (100), Expect(2) = 3e-06 Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Frame = +1 Query: 358 MSISSKAVEK*PVFNFCFTCSLSSRAIPSLR-FALH*NKRYFGGFLCKKMLWESRRCDIS 534 M++S++ EK P + L + + LR F++ R L KKM+W R + Sbjct: 1 MNLSTRLAEKLPGILPAPSSPLLRKGVSELRCFSIANQSRRLRWGLQKKMVWSLERAETC 60 Query: 535 VVMKIAVEKKGVIVPGKEEFADNXXXXXXXXXXXXVPPDTLYGXXXXXXXXXXXXVNRIY 714 VV K + + P E +A VP DTLYG V+RIY Sbjct: 61 VVSKSCL-----VHPATEAYAQEAIEAIKSEKVIAVPTDTLYG--FACDACSLEAVSRIY 113 Query: 715 EIKG 726 EIKG Sbjct: 114 EIKG 117 Score = 35.4 bits (80), Expect(2) = 3e-06 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 2/33 (6%) Frame = +2 Query: 725 VGVVFDIECFAVT--LPRGLPDNLLPGPLTVVI 817 VG V DI+ A T LP GL D+LLPGP+T+V+ Sbjct: 128 VGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVL 160