BLASTX nr result

ID: Coptis25_contig00023683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023683
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39561.3| unnamed protein product [Vitis vinifera]              273   1e-71
ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|2...   273   1e-71
emb|CAN74504.1| hypothetical protein VITISV_015888 [Vitis vinifera]   272   2e-71
ref|XP_002278468.2| PREDICTED: kinesin-4-like [Vitis vinifera]        270   7e-71
ref|XP_002512478.1| kinesin heavy chain, putative [Ricinus commu...   269   2e-70

>emb|CBI39561.3| unnamed protein product [Vitis vinifera]
          Length = 1044

 Score =  273 bits (697), Expect = 1e-71
 Identities = 136/170 (80%), Positives = 149/170 (87%), Gaps = 7/170 (4%)
 Frame = -2

Query: 492 RVYCRVRPFLPGQPNRTSSVDHIEEGNITITTPAKYGKEGRRSFNFNKVFGPYASQDEVF 313
           RVYCRVRPFL GQP   SSVD IEEG+I+I TP+KYGKEGR+SFNFNKVFGP A+Q+EVF
Sbjct: 413 RVYCRVRPFLDGQPKCLSSVDQIEEGSISIITPSKYGKEGRKSFNFNKVFGPSATQEEVF 472

Query: 312 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTERSQGVNYRALSDLFLLSEQR 133
           SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTE   GVNYRALSDLF LSEQR
Sbjct: 473 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTEEGLGVNYRALSDLFHLSEQR 532

Query: 132 KNTFCYDISVQMIEIYNEQVRDLLVTDGLNRR-------LEIRNNSQNGV 4
           K T  Y++SVQMIEIYNEQVRDLLVTDGLN++       +EIRN+SQNG+
Sbjct: 533 KGTLHYEVSVQMIEIYNEQVRDLLVTDGLNKKYPFLLHGIEIRNSSQNGI 582


>ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|222857345|gb|EEE94892.1|
           predicted protein [Populus trichocarpa]
          Length = 981

 Score =  273 bits (697), Expect = 1e-71
 Identities = 133/163 (81%), Positives = 148/163 (90%)
 Frame = -2

Query: 492 RVYCRVRPFLPGQPNRTSSVDHIEEGNITITTPAKYGKEGRRSFNFNKVFGPYASQDEVF 313
           RVYCRVRPFL GQ +R S+VDHI+EGNITI+TP+KYGKEGR+SFNFNKVFGP A+Q+EVF
Sbjct: 385 RVYCRVRPFLTGQASRFSTVDHIDEGNITISTPSKYGKEGRKSFNFNKVFGPLATQEEVF 444

Query: 312 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTERSQGVNYRALSDLFLLSEQR 133
           +DTQPLIRSVLDGYNVCIFAYGQTGSGKT+TMTGPKELTE S GVNYRALSDLFLLS+QR
Sbjct: 445 ADTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALSDLFLLSDQR 504

Query: 132 KNTFCYDISVQMIEIYNEQVRDLLVTDGLNRRLEIRNNSQNGV 4
           K   CYDISVQM+EIYNEQVRDLLVT+      EIRN+SQNG+
Sbjct: 505 KEVICYDISVQMLEIYNEQVRDLLVTE------EIRNSSQNGI 541


>emb|CAN74504.1| hypothetical protein VITISV_015888 [Vitis vinifera]
          Length = 1058

 Score =  272 bits (695), Expect = 2e-71
 Identities = 136/171 (79%), Positives = 149/171 (87%), Gaps = 8/171 (4%)
 Frame = -2

Query: 492 RVYCRVRPFLPGQPNRTSSVDHIEEGNITITTPAKYGKEGRRSFNFNKVFGPYASQDEVF 313
           RVYCRVRPFL GQP   SSVD IEEG+I+I TP+KYGKEGR+SFNFNKVFGP A+Q+EVF
Sbjct: 426 RVYCRVRPFLDGQPKCLSSVDQIEEGSISIITPSKYGKEGRKSFNFNKVFGPSATQEEVF 485

Query: 312 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTERSQGVNYRALSDLFLLSEQR 133
           SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTE   GVNYRALSDLF LSEQR
Sbjct: 486 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTEEGLGVNYRALSDLFHLSEQR 545

Query: 132 KNTFCYDISVQMIEIYNEQVRDLLVTDGLNRR--------LEIRNNSQNGV 4
           K T  Y++SVQMIEIYNEQVRDLLVTDGLN++        +EIRN+SQNG+
Sbjct: 546 KGTLHYEVSVQMIEIYNEQVRDLLVTDGLNKKYPFLLHGSVEIRNSSQNGI 596


>ref|XP_002278468.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1056

 Score =  270 bits (691), Expect = 7e-71
 Identities = 135/169 (79%), Positives = 148/169 (87%), Gaps = 6/169 (3%)
 Frame = -2

Query: 492 RVYCRVRPFLPGQPNRTSSVDHIEEGNITITTPAKYGKEGRRSFNFNKVFGPYASQDEVF 313
           RVYCRVRPFL GQP   SSVD IEEG+I+I TP+KYGKEGR+SFNFNKVFGP A+Q+EVF
Sbjct: 426 RVYCRVRPFLDGQPKCLSSVDQIEEGSISIITPSKYGKEGRKSFNFNKVFGPSATQEEVF 485

Query: 312 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTERSQGVNYRALSDLFLLSEQR 133
           SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTE   GVNYRALSDLF LSEQR
Sbjct: 486 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTEEGLGVNYRALSDLFHLSEQR 545

Query: 132 KNTFCYDISVQMIEIYNEQVRDLLVTDGLNRRL------EIRNNSQNGV 4
           K T  Y++SVQMIEIYNEQVRDLLVTDGLN++       +IRN+SQNG+
Sbjct: 546 KGTLHYEVSVQMIEIYNEQVRDLLVTDGLNKKYPFLLHGKIRNSSQNGI 594


>ref|XP_002512478.1| kinesin heavy chain, putative [Ricinus communis]
           gi|223548439|gb|EEF49930.1| kinesin heavy chain,
           putative [Ricinus communis]
          Length = 1051

 Score =  269 bits (688), Expect = 2e-70
 Identities = 131/175 (74%), Positives = 150/175 (85%), Gaps = 12/175 (6%)
 Frame = -2

Query: 492 RVYCRVRPFLPGQPNRTSSVDHIEEGNITITTPAKYGKEGRRSFNFNKVFGPYASQDEVF 313
           RVYCRVRPFLPGQ +R S+VDHIEEGNI I TP+KYGKEG+++F FNKVFGP A+Q+EVF
Sbjct: 412 RVYCRVRPFLPGQQSRFSTVDHIEEGNIAIITPSKYGKEGKKTFTFNKVFGPLATQEEVF 471

Query: 312 SDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTERSQGVNYRALSDLFLLSEQR 133
           +DT+PLIRSVLDGYNVCIFAYGQTGSGKT+TMTGPKELTE S GVNYRALSDLFLLS+QR
Sbjct: 472 ADTRPLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALSDLFLLSDQR 531

Query: 132 KNTFCYDISVQMIEIYNEQVRDLLVTDGLNRRL------------EIRNNSQNGV 4
           K   CY+ISVQM+EIYNEQVRDLL +DGLN+R             +IRN+SQNG+
Sbjct: 532 KEIVCYEISVQMLEIYNEQVRDLLASDGLNKRYPYMAVFCPCLKQQIRNSSQNGI 586


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