BLASTX nr result

ID: Coptis25_contig00023648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023648
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus comm...   113   2e-23
ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_003518483.1| PREDICTED: uncharacterized protein LOC100820...   111   7e-23
ref|XP_003617249.1| Rho GTPase-activating protein [Medicago trun...   110   9e-23
ref|XP_003545415.1| PREDICTED: uncharacterized protein LOC100817...   109   2e-22

>ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus communis]
            gi|223534625|gb|EEF36321.1| Rho GTPase activator,
            putative [Ricinus communis]
          Length = 821

 Score =  113 bits (282), Expect = 2e-23
 Identities = 67/119 (56%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
 Frame = -2

Query: 355  EWKKIKGQLLPSTSNGTQLCRKTGAXXXXXXXXXXXXXSANISVNELCAVDSANVPSTSR 176
            +W+ IK   L + S+  QL +K                S N+S++ELC VDSA  PSTSR
Sbjct: 700  DWRNIKVTGLATGSSSRQLPQKQFMESTSLSDSKSTEASTNMSMDELCGVDSA--PSTSR 757

Query: 175  TIEKKNQT-HLSATSSALVELTTRLDFFKERRSQLMEQLHILDLNYGVASSQGFVYKPS 2
             +E  +   H SA SSALVELTTRLDFFKERRSQLMEQLH LDLNYG  SSQ F+YKPS
Sbjct: 758  AVEMMDYPRHPSAASSALVELTTRLDFFKERRSQLMEQLHNLDLNYGATSSQDFIYKPS 816


>ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|222850410|gb|EEE87957.1|
            predicted protein [Populus trichocarpa]
          Length = 872

 Score =  111 bits (278), Expect = 5e-23
 Identities = 67/121 (55%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361  GAEWKKIKGQLLPSTSNGTQLCRKTGAXXXXXXXXXXXXXSANISVNELCAVDSANVPST 182
            G + K IKG  + + S+  Q  RK                S N+S++ELC VDSA  PST
Sbjct: 749  GTDRKHIKGPGIATGSSSRQPSRKQFMESANLSDSKSTEASTNMSMDELCGVDSA--PST 806

Query: 181  SRTIEKKNQT-HLSATSSALVELTTRLDFFKERRSQLMEQLHILDLNYGVASSQGFVYKP 5
            SR +E  +   H SA SSALVELTTRLDFFKERRSQLMEQLH LDLNYG  SSQ F+Y+P
Sbjct: 807  SRAVEVMDYPRHPSAASSALVELTTRLDFFKERRSQLMEQLHNLDLNYGATSSQDFIYRP 866

Query: 4    S 2
            S
Sbjct: 867  S 867


>ref|XP_003518483.1| PREDICTED: uncharacterized protein LOC100820132 [Glycine max]
          Length = 870

 Score =  111 bits (277), Expect = 7e-23
 Identities = 65/121 (53%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361  GAEWKKIKGQLLPSTSNGTQLCRKTGAXXXXXXXXXXXXXSANISVNELCAVDSANVPST 182
            G +W+ IKGQ+L S  NGT+   +                S ++SV++L A+DSA+VPST
Sbjct: 746  GTDWRNIKGQVLAS-GNGTRQPSRKQFLESSPSDSKSTEASTSMSVDDLGAIDSASVPST 804

Query: 181  SRTIEKKNQT-HLSATSSALVELTTRLDFFKERRSQLMEQLHILDLNYGVASSQGFVYKP 5
            SR  +      H    SS LVELTTRLDFFKERRSQLMEQLH LDLNYG  +SQ FVYKP
Sbjct: 805  SRVADVGEYARHPPVASSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGSTTSQDFVYKP 864

Query: 4    S 2
            S
Sbjct: 865  S 865


>ref|XP_003617249.1| Rho GTPase-activating protein [Medicago truncatula]
            gi|355518584|gb|AET00208.1| Rho GTPase-activating protein
            [Medicago truncatula]
          Length = 920

 Score =  110 bits (276), Expect = 9e-23
 Identities = 66/122 (54%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
 Frame = -2

Query: 361  GAEWKKIKGQLLPSTSNGTQLCRKTGAXXXXXXXXXXXXXSANISVNELCAVDSANVPST 182
            G++W+ IKGQ+L S +   Q  RK                S ++SV+EL  VDS +VPST
Sbjct: 795  GSDWRNIKGQVLASGNGSRQPSRKP-FIDSSPSDSKSTEASTSMSVDELGVVDSGSVPST 853

Query: 181  SRTIE--KKNQTHLSATSSALVELTTRLDFFKERRSQLMEQLHILDLNYGVASSQGFVYK 8
            SR  E  + N  H S  SS LVELTTRLDFFKERRSQLMEQLH LDLNYG  +SQ  VYK
Sbjct: 854  SRAAEVTEYNGRHPSVASSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGSTTSQDMVYK 913

Query: 7    PS 2
            P+
Sbjct: 914  PT 915


>ref|XP_003545415.1| PREDICTED: uncharacterized protein LOC100817923 [Glycine max]
          Length = 861

 Score =  109 bits (273), Expect = 2e-22
 Identities = 68/121 (56%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361  GAEWKKIKGQLLPSTSNGTQLCRKTGAXXXXXXXXXXXXXSANISVNELCAVDSANVPST 182
            G +W+ IKGQ+L S   G Q  RK                S ++SV++L A+DSA+VPST
Sbjct: 740  GTDWRNIKGQVLAS---GRQPSRKQ-FLESSPSDSKSTEASTSMSVDDLGALDSASVPST 795

Query: 181  SRTIEKKNQT-HLSATSSALVELTTRLDFFKERRSQLMEQLHILDLNYGVASSQGFVYKP 5
            SR  E      H S  SS LVELTTRLDFFKERRSQLMEQLH LDLNYG  +SQ FVYKP
Sbjct: 796  SRAAEVGEYARHPSVASSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGSTTSQDFVYKP 855

Query: 4    S 2
            S
Sbjct: 856  S 856


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