BLASTX nr result

ID: Coptis25_contig00023620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023620
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326915.1| predicted protein [Populus trichocarpa] gi|2...   240   8e-61
ref|XP_003589258.1| hypothetical protein MTR_1g021180 [Medicago ...   231   5e-58
ref|XP_003549415.1| PREDICTED: uncharacterized protein LOC100804...   230   8e-58
ref|XP_002510285.1| signal peptidase I, putative [Ricinus commun...   229   1e-57
ref|XP_004160620.1| PREDICTED: uncharacterized protein LOC101229...   219   1e-54

>ref|XP_002326915.1| predicted protein [Populus trichocarpa] gi|222835230|gb|EEE73665.1|
            predicted protein [Populus trichocarpa]
          Length = 398

 Score =  240 bits (612), Expect = 8e-61
 Identities = 121/254 (47%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
 Frame = +3

Query: 327  LFLQSNTTHSGLKRLIVGEGITVTVEGAREISLFHLSDFGLPIHRSR-GNSEDRNHYWPS 503
            L L  N ++ GLKR+IVGEGI+V V+GA+E+SLF   D  L ++ S   N++  N ++P 
Sbjct: 145  LLLPMNASYGGLKRIIVGEGISVEVKGAKEVSLFQDFDLSLALNGSDINNNKGGNGFYPF 204

Query: 504  REYSCMPLPPIHILGSASLLTYRTRNRNAYIETRFLSAGILQLLPEKCYSGPSYKKRACS 683
             +  C PL PI I+GSASL+  +  + +A IETR LS   ++L+ +KCY    YK RA +
Sbjct: 205  GDSICPPLLPIRIIGSASLVANKNWDPDAEIETRLLSKKTIELVSDKCYDRNVYKIRAST 264

Query: 684  INNISERLDLLEKLMKSILGDRLRQNGKQGFLRAKITASSVVRFELELERDIWDDDLYWG 863
            ++ +S  +  LE++++S LGDR+ +NG   FLRA   AS+++RF+LELE+    ++    
Sbjct: 265  MHFLSSSIARLEEVLRSFLGDRITRNGLSSFLRATAKASTLIRFQLELEKSFGSNETAQE 324

Query: 864  TLAEWRSKPTAERIQFEVVARMEGERLMPLVVKKVKPLISAHSTTWSTLMSNMSFTKFPS 1043
              AEWR++PT ER+ FEV+AR+EGE+L P++VKKV+P I+  S +WS LMSN+SFT FPS
Sbjct: 325  VFAEWRTRPTVERVWFEVIARVEGEKLKPVIVKKVRPFIAVDSASWSNLMSNISFTNFPS 384

Query: 1044 FVVPPEVLTLDM*W 1085
             +VPPE LTLD+ W
Sbjct: 385  VLVPPEALTLDVKW 398


>ref|XP_003589258.1| hypothetical protein MTR_1g021180 [Medicago truncatula]
            gi|355478306|gb|AES59509.1| hypothetical protein
            MTR_1g021180 [Medicago truncatula]
          Length = 451

 Score =  231 bits (588), Expect = 5e-58
 Identities = 116/254 (45%), Positives = 172/254 (67%)
 Frame = +3

Query: 324  MLFLQSNTTHSGLKRLIVGEGITVTVEGAREISLFHLSDFGLPIHRSRGNSEDRNHYWPS 503
            M++   N +++GLK +IVG+GITV V  AREIS ++ SD  L  + S   S  +N +WP 
Sbjct: 181  MIYDTMNVSYNGLKHIIVGKGITVEVRRAREISFYYQSDLDLQRNGSVICSNQKNEFWPF 240

Query: 504  REYSCMPLPPIHILGSASLLTYRTRNRNAYIETRFLSAGILQLLPEKCYSGPSYKKRACS 683
             +  C+PL PI I+GSASL+ Y  RN    I T  +S   ++LLPEKCY G  ++K+AC 
Sbjct: 241  LQSMCVPLIPIRIIGSASLIAYVARNPYVQIGTALISEDAVELLPEKCYHGCVFRKQACP 300

Query: 684  INNISERLDLLEKLMKSILGDRLRQNGKQGFLRAKITASSVVRFELELERDIWDDDLYWG 863
            + +++ RL LLEK+++S+LG ++ Q+   G ++A I A + V+F LELERD+  ++    
Sbjct: 301  VASLNLRLILLEKILRSLLGHKILQDRLSGLIKANIKAYAGVKFPLELERDV-GNNATLS 359

Query: 864  TLAEWRSKPTAERIQFEVVARMEGERLMPLVVKKVKPLISAHSTTWSTLMSNMSFTKFPS 1043
            TL +WR++P+ ER+ FEV+AR+E  RL PL +KKVKP I + S +W+ LMSN+S+TK   
Sbjct: 360  TLPDWRTRPSVERVWFEVMARVEDSRLKPLSIKKVKPFIESDSVSWANLMSNLSYTKLRP 419

Query: 1044 FVVPPEVLTLDM*W 1085
             ++PPE LTLD+ W
Sbjct: 420  VLLPPEALTLDVKW 433


>ref|XP_003549415.1| PREDICTED: uncharacterized protein LOC100804093 [Glycine max]
          Length = 393

 Score =  230 bits (586), Expect = 8e-58
 Identities = 120/253 (47%), Positives = 170/253 (67%)
 Frame = +3

Query: 327  LFLQSNTTHSGLKRLIVGEGITVTVEGAREISLFHLSDFGLPIHRSRGNSEDRNHYWPSR 506
            L L  N +++GLK ++VGEGITV V  A+EISLF+ SD  L ++ S   SE ++  WP  
Sbjct: 141  LSLPMNVSYTGLKHILVGEGITVEVRRAQEISLFYSSDLDLQMNGSAMCSEGKSDLWPFM 200

Query: 507  EYSCMPLPPIHILGSASLLTYRTRNRNAYIETRFLSAGILQLLPEKCYSGPSYKKRACSI 686
              +CM L PI I GSASL+ YR RN  A I T  +S   ++LLPEKCY G  ++KRAC I
Sbjct: 201  RSTCMALIPIRISGSASLVAYRARNAYAQIATTLISEDAIELLPEKCYHGHVFRKRACPI 260

Query: 687  NNISERLDLLEKLMKSILGDRLRQNGKQGFLRAKITASSVVRFELELERDIWDDDLYWGT 866
            +++S RL LLEK+++S L  ++ ++   G L+A I AS+VV+F LELERDI ++     T
Sbjct: 261  DSLSLRLSLLEKVLRSFLDHKILKDQLFGLLKANIKASAVVKFPLELERDISNNATLNRT 320

Query: 867  LAEWRSKPTAERIQFEVVARMEGERLMPLVVKKVKPLISAHSTTWSTLMSNMSFTKFPSF 1046
            + +WR++P  ER  FE++AR+E  +L PL++K+V+P I + S +W+ LMSNMS+TK    
Sbjct: 321  IPDWRTRPGFERFWFEILARVEENKLKPLLIKEVRPFIESVSVSWANLMSNMSYTKLRPV 380

Query: 1047 VVPPEVLTLDM*W 1085
               PE LTLD+ W
Sbjct: 381  FFLPEPLTLDVKW 393


>ref|XP_002510285.1| signal peptidase I, putative [Ricinus communis]
            gi|223550986|gb|EEF52472.1| signal peptidase I, putative
            [Ricinus communis]
          Length = 831

 Score =  229 bits (584), Expect = 1e-57
 Identities = 116/253 (45%), Positives = 174/253 (68%)
 Frame = +3

Query: 327  LFLQSNTTHSGLKRLIVGEGITVTVEGAREISLFHLSDFGLPIHRSRGNSEDRNHYWPSR 506
            L L  N +HS LKR++VGEGITV V+ A+++S+F   D    ++     ++ ++ +    
Sbjct: 582  LSLPLNVSHSSLKRMLVGEGITVEVKDAQQLSIFQTFDPSFSMNGRVKINKGKSGFCLFW 641

Query: 507  EYSCMPLPPIHILGSASLLTYRTRNRNAYIETRFLSAGILQLLPEKCYSGPSYKKRACSI 686
               CMPL PI ++GSASL+ Y+TRN +A +ET  LS G ++LL EKCYS   YK +A   
Sbjct: 642  RQLCMPLLPIRVIGSASLIAYKTRNPDAPVETTLLSEGTIKLLSEKCYSDDLYKNQAQLS 701

Query: 687  NNISERLDLLEKLMKSILGDRLRQNGKQGFLRAKITASSVVRFELELERDIWDDDLYWGT 866
            + +S ++D L KL+++ LG+++  +G   FLR+ + A++++RF+LELE++I         
Sbjct: 702  HFLSLKIDRLGKLLRTFLGNQMELSG---FLRSNVKAATIIRFQLELEKNIGSSATLHDA 758

Query: 867  LAEWRSKPTAERIQFEVVARMEGERLMPLVVKKVKPLISAHSTTWSTLMSNMSFTKFPSF 1046
            L +WR++PT ER+ FEV+AR+E E+L P+VVKKV+P I+  S +WS LMSN+SFTKFPS 
Sbjct: 759  LEDWRTRPTIERVYFEVLARVEDEKLRPVVVKKVRPFIAVDSASWSNLMSNLSFTKFPSI 818

Query: 1047 VVPPEVLTLDM*W 1085
            +VPPE LTLD+ W
Sbjct: 819  LVPPEALTLDVKW 831


>ref|XP_004160620.1| PREDICTED: uncharacterized protein LOC101229456 [Cucumis sativus]
          Length = 763

 Score =  219 bits (558), Expect = 1e-54
 Identities = 114/251 (45%), Positives = 161/251 (64%)
 Frame = +3

Query: 333  LQSNTTHSGLKRLIVGEGITVTVEGAREISLFHLSDFGLPIHRSRGNSEDRNHYWPSREY 512
            L  N TH G+KR++VGEGITV V  A E+S+F+ SD    ++ +R  S  +   +P R  
Sbjct: 514  LPKNATHVGVKRILVGEGITVEVSEAEEVSVFYSSDLSKLLNETR-RSNGKIRTYPFRLP 572

Query: 513  SCMPLPPIHILGSASLLTYRTRNRNAYIETRFLSAGILQLLPEKCYSGPSYKKRACSINN 692
             C PL P+ +LGSA+L  YRT+N + YI TRFLS   ++LLP KCY   ++ + +  + +
Sbjct: 573  FCSPLLPLRVLGSATLSAYRTQNPDDYIRTRFLSKDSIELLPNKCYGRNTHIENSPLLGS 632

Query: 693  ISERLDLLEKLMKSILGDRLRQNGKQGFLRAKITASSVVRFELELERDIWDDDLYWGTLA 872
            +  +  +L+ + +  L + + QNG   F++ K+ A  VVRF+LELE     +   +  LA
Sbjct: 633  LKPQFHMLDTVFQRYLRNWILQNGLLAFVKVKMRACVVVRFQLELENTFGTNSSLYARLA 692

Query: 873  EWRSKPTAERIQFEVVARMEGERLMPLVVKKVKPLISAHSTTWSTLMSNMSFTKFPSFVV 1052
            EWR+KPT ER  FEV+AR++  RL PL VKK+KPLI A ST W  L+ N+SFTKFPS +V
Sbjct: 693  EWRTKPTVERASFEVLARLDTVRLKPLAVKKLKPLIVADSTEWRNLLPNISFTKFPSLLV 752

Query: 1053 PPEVLTLDM*W 1085
             PE LTLD+ W
Sbjct: 753  SPEALTLDVKW 763


Top