BLASTX nr result
ID: Coptis25_contig00023611
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023611 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310337.1| single myb histone [Populus trichocarpa] gi|... 114 8e-24 ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi... 114 1e-23 gb|ABK96429.1| unknown [Populus trichocarpa x Populus deltoides] 114 1e-23 ref|XP_003524694.1| PREDICTED: uncharacterized protein LOC100779... 113 2e-23 ref|NP_001235806.1| MYB transcription factor MYB85 [Glycine max]... 113 2e-23 >ref|XP_002310337.1| single myb histone [Populus trichocarpa] gi|222853240|gb|EEE90787.1| single myb histone [Populus trichocarpa] Length = 293 Score = 114 bits (285), Expect = 8e-24 Identities = 53/68 (77%), Positives = 59/68 (86%) Frame = +1 Query: 148 MGAPKQRWTEEEEAALKAGILKHGLGKWRIISKDPEFSGILCLRSNVDLKDKWRNMNVTA 327 MGAPKQ+WT EEEAALKAG+LKHG GKWR I DPEFS +L LRSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTSEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA 60 Query: 328 QYGSRRLA 351 +GSR+ A Sbjct: 61 IWGSRKKA 68 >ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi|223535437|gb|EEF37107.1| Histone H1.1, putative [Ricinus communis] Length = 303 Score = 114 bits (284), Expect = 1e-23 Identities = 54/68 (79%), Positives = 59/68 (86%) Frame = +1 Query: 148 MGAPKQRWTEEEEAALKAGILKHGLGKWRIISKDPEFSGILCLRSNVDLKDKWRNMNVTA 327 MGAPKQ+WT EEEAALKAG+LKHG GKWR I DPEFS IL LRSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAILRLRSNVDLKDKWRNINVTA 60 Query: 328 QYGSRRLA 351 +GSR+ A Sbjct: 61 IWGSRQKA 68 >gb|ABK96429.1| unknown [Populus trichocarpa x Populus deltoides] Length = 140 Score = 114 bits (284), Expect = 1e-23 Identities = 53/68 (77%), Positives = 59/68 (86%) Frame = +1 Query: 148 MGAPKQRWTEEEEAALKAGILKHGLGKWRIISKDPEFSGILCLRSNVDLKDKWRNMNVTA 327 MGAPKQ+WT EEEAALKAG+LKHG GKWR I DPEFS +L LRSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA 60 Query: 328 QYGSRRLA 351 +GSR+ A Sbjct: 61 IWGSRKKA 68 >ref|XP_003524694.1| PREDICTED: uncharacterized protein LOC100779583 [Glycine max] Length = 295 Score = 113 bits (282), Expect = 2e-23 Identities = 53/68 (77%), Positives = 59/68 (86%) Frame = +1 Query: 148 MGAPKQRWTEEEEAALKAGILKHGLGKWRIISKDPEFSGILCLRSNVDLKDKWRNMNVTA 327 MGAPKQ+WT EEEAALKAG+LKHG GKWR I DPEFS IL +RSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVLKHGAGKWRTILTDPEFSAILRMRSNVDLKDKWRNINVTA 60 Query: 328 QYGSRRLA 351 +GSR+ A Sbjct: 61 IWGSRQKA 68 >ref|NP_001235806.1| MYB transcription factor MYB85 [Glycine max] gi|110931682|gb|ABH02840.1| MYB transcription factor MYB85 [Glycine max] Length = 295 Score = 113 bits (282), Expect = 2e-23 Identities = 53/68 (77%), Positives = 59/68 (86%) Frame = +1 Query: 148 MGAPKQRWTEEEEAALKAGILKHGLGKWRIISKDPEFSGILCLRSNVDLKDKWRNMNVTA 327 MGAPKQ+WT EEEAALKAG+LKHG GKWR I DPEFS IL +RSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVLKHGAGKWRTILTDPEFSAILHMRSNVDLKDKWRNINVTA 60 Query: 328 QYGSRRLA 351 +GSR+ A Sbjct: 61 IWGSRQKA 68