BLASTX nr result

ID: Coptis25_contig00023607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023607
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19366.3| unnamed protein product [Vitis vinifera]              103   3e-20
ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|2...   102   7e-20
ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002510054.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago ...    80   3e-13

>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  103 bits (256), Expect = 3e-20
 Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 7/154 (4%)
 Frame = +1

Query: 58  MNPNKVHSQGSIPFSWENQPGISKVK-----YPSDVGTCALIKLPPPPCQSDVSSPKILG 222
           MN +K+HSQG++PF+WEN+PG+ K +      P+D G   +IKL PPPC  +   P + G
Sbjct: 1   MNQSKIHSQGNVPFAWENKPGVCKARRDDEDCPTDTGH-FVIKLQPPPCPLEKGRPSVHG 59

Query: 223 HDIQVXXXXXXXXXXXXXXXRKGLRRQDDDPFLAAYKECTKSVKQSKLSTYSKKIGGSRE 402
             I +               +KG  R+ +DPFLAAYKECTK+ ++          G +  
Sbjct: 60  SQIPL-PPCTFQGPPSRNSSKKGHLRKQEDPFLAAYKECTKNTRKG-------HDGKTHL 111

Query: 403 GRIGSLF--SCKYSCGVREDSMAKLSRLSPPIPR 498
           GR  S+F  SCK+SC VR+D++   SRLS  + R
Sbjct: 112 GR-SSMFNLSCKHSCNVRDDNLVSKSRLSALVSR 144


>ref|XP_002310885.1| predicted protein [Populus trichocarpa] gi|222853788|gb|EEE91335.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  102 bits (253), Expect = 7e-20
 Identities = 67/162 (41%), Positives = 90/162 (55%), Gaps = 11/162 (6%)
 Frame = +1

Query: 58  MNPNKVHSQGSIPFSWENQPGISKV---KYPSDVGTCAL-IKLPPPPC----QSDVSSPK 213
           M+  KV+SQGSIPFSWE+ PG+SKV   +Y  D+G  A+ I  P  P      SD S   
Sbjct: 1   MSHRKVYSQGSIPFSWEDSPGVSKVIHKEYTIDIGLNAVNISSPTSPILFPRDSDTSYKV 60

Query: 214 ILGHDIQVXXXXXXXXXXXXXXXRK---GLRRQDDDPFLAAYKECTKSVKQSKLSTYSKK 384
           +  H I++                K   G R   +DPFLAAYKECTK+ +  KLS+ SKK
Sbjct: 61  LGSHGIKIPLPPCVSAKIEPPRRSKSVKGFRWWQEDPFLAAYKECTKNGRNGKLSSESKK 120

Query: 385 IGGSREGRIGSLFSCKYSCGVREDSMAKLSRLSPPIPRETDR 510
              S+  +   +FSCK SC V++D++  L+ L P IPR+  R
Sbjct: 121 NVRSKLRKSRLIFSCKDSCDVQDDNLVMLANL-PAIPRDRVR 161


>ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|222860791|gb|EEE98333.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
 Frame = +1

Query: 58  MNPNKVHSQGSIPFSWENQPGISKVKYPSDV--GTCALIKLPPPPCQSDVSSPKILGHDI 231
           M  +K+HS+G++PFSWE +PG SKV    D      +++KL PPPC   V S +I  HDI
Sbjct: 1   MKQSKIHSKGNVPFSWEKKPGESKVTSHHDYLSRETSVVKLQPPPC--PVESSRISTHDI 58

Query: 232 QV---XXXXXXXXXXXXXXXRKGLRRQ-DDDPFLAAYKECTKSVKQSKLSTYSKKIG-GS 396
            +                  R+GL++  DDDPFLAAYKECTK  K        K  G G 
Sbjct: 59  IIPLPPCTFQAPGAPLRSSSRRGLKKDIDDDPFLAAYKECTKKDK-----PVGKDFGSGR 113

Query: 397 REGRIGSLFSCKYSCGVREDSMAKLSRLSPPIPRE 501
           R+  I    SCK SC VR+D++ ++S++  P  RE
Sbjct: 114 RKRAIFDFSSCKQSCSVRDDNLVRVSQV--PYERE 146


>ref|XP_002510054.1| conserved hypothetical protein [Ricinus communis]
           gi|223550755|gb|EEF52241.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
 Frame = +1

Query: 58  MNPNKVHSQGSIPFSWENQPGISK-VKYPSDVGT--CALIKLPPPPCQSDVSSPKILGHD 228
           M+ +K +++G++PFSWE +PG+SK +   SD       ++KL PPPC   + SP+I  HD
Sbjct: 1   MDQSKANTKGNVPFSWEKKPGVSKLINQDSDPNQEEDLVLKLLPPPCP--IESPRISTHD 58

Query: 229 -IQVXXXXXXXXXXXXXXXRKGLRRQDDDPFLAAYKECTKSV-KQSKLSTYSKKIGGSRE 402
            I +               RKG+R+QDD PFLAAYKECTKS  K  KLS  +    G R+
Sbjct: 59  TINIPLPPCTFQPPSRSSSRKGIRKQDD-PFLAAYKECTKSTEKGDKLSRNNAARSGLRK 117

Query: 403 GR 408
           G+
Sbjct: 118 GQ 119


>ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago truncatula]
           gi|355509615|gb|AES90757.1| hypothetical protein
           MTR_4g097480 [Medicago truncatula]
          Length = 175

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 60/164 (36%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
 Frame = +1

Query: 58  MNPNKVHSQGSIPFSWENQPGISKVKYP----SDVGTCALIKLPPPPCQSDVSSPKIL-- 219
           M+  K HS GSIPFSWE++PGI K        + +   +  KL P     ++S   IL  
Sbjct: 1   MSHRKSHSYGSIPFSWEDKPGICKTPNNECPLNSINKKSSSKLSPSHF-DNISKKNILEF 59

Query: 220 -GHDIQVXXXXXXXXXXXXXXXRKGLRRQDDDPFLAAYKECTKSVKQSKLSTYSKKIGGS 396
               I +                KG + Q +DPFL AYKECTKS K  K+ + +KK  G 
Sbjct: 60  QDKKISIPLPPCQTQPPQRSTSGKGFKLQ-EDPFLVAYKECTKSDKNCKMQSKNKKGVGF 118

Query: 397 R--EGRIGSLFSCKYSCGVREDSMAKLSRLSPPIPRETDRDSIL 522
                R  S+FSC+ +  V++DS  KLS+L P +P   DR  +L
Sbjct: 119 NFVSLRSYSIFSCRSAIDVKDDSYIKLSKL-PRLPAHRDRSRML 161