BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023593
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520302.1| PREDICTED: pyruvate kinase, cytosolic isozym...    67   7e-09
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...    65   1e-08
ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778...    65   2e-08
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...    65   2e-08
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   3e-08

>ref|XP_003520302.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Glycine max]
          Length = 584

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
 Frame = +1

Query: 13  VWKAKLSGRNQHFLWKVYIDGLPTGEVLNARKM-VGDFNCPFCQNHMESSLHLFFQCEWI 189
           +WK K+  +   F W++  D LPT   L  R + V D +CPFC    E++ H+FFQC  I
Sbjct: 57  LWKLKIPTKIAAFAWRLINDRLPTRTNLRKRHIEVTDSSCPFCSLVEETAGHIFFQCSKI 116

Query: 190 RGVWFTAITSIR-IDAHASWGVRNWLDEIMGWTENREDHIRSLGIYACLLLSCIWEHRNK 366
             +W+ +++ +  +    +   +++L  I G T  R   ++    +   L    W+HRN 
Sbjct: 117 IQLWWESLSWVNLVGVFPNHPRQHFLQHIHGVT--RGMRVQRWNWWWLALTWTTWKHRND 174

Query: 367 ILFDARQKNRTSILNATEALWKRAIKAYDDI 459
           I+F     N   +++  E++  +A+K  D I
Sbjct: 175 IIFANGTFNANKLMDDAESIVLQAVKNGDTI 205


>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
           gi|223537282|gb|EEF38913.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 446

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 33/130 (25%), Positives = 67/130 (51%)
 Frame = +1

Query: 4   IQRVWKAKLSGRNQHFLWKVYIDGLPTGEVLNARKMVGDFNCPFCQNHMESSLHLFFQCE 183
           + + W+  +    +HF+W++  + LP  E L  RK+     C  C   +E+  ++F +C+
Sbjct: 127 VNKCWRLNILHGVKHFMWRLNHNLLPCIENLKNRKIDMGEICSRCGGCVETQTYVFKKCQ 186

Query: 184 WIRGVWFTAITSIRIDAHASWGVRNWLDEIMGWTENREDHIRSLGIYACLLLSCIWEHRN 363
           ++R  W T    +R+D      ++NW+++I   +   +D I        +LL C W  RN
Sbjct: 187 FVRSFWLTYPLGLRVDTIVVEDLKNWVNQI--HSVGDDDFIEKF----AMLLWCYWNLRN 240

Query: 364 KILFDARQKN 393
           K +F+ ++++
Sbjct: 241 KFIFERKEED 250


>ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778359 [Glycine max]
          Length = 2621

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
 Frame = +1

Query: 13   VWKAKLSGRNQHFLWKVYIDGLPTGEVLNARKM-VGDFNCPFCQNHMESSLHLFFQCEWI 189
            +WK K+  +   F W++  D LPT   L AR++ + D  CPFC+   E++ H+F  C   
Sbjct: 1672 LWKIKIPSKFLMFAWRLLWDRLPTKANLRARQVQISDLTCPFCRRVEETASHMFIHCIKT 1731

Query: 190  RGVWFTAITSIRIDAHASWGVRNWLDEIMGWTENREDHIRS--LGIYACLLLSCIWEHRN 363
            + +W+  +  I +     W +    D  M ++  +E  IRS     +   +   IW+ RN
Sbjct: 1732 QPIWWETMNWINMQGPLPWSI---TDHFMQFSSLKEAGIRSRRWQWWWMAVTWSIWQLRN 1788

Query: 364  KILF-DARQKNRTSILNATEALWKRAIKAYDDIQDH----HLTNSTHYNFL 501
             I+F +A       + +A+  LW        D   H      TN   +NF+
Sbjct: 1789 SIVFSNATFDGNKLVEDASFLLWTWLHNLEKDFSLHFNQWSRTNYMDFNFV 1839


>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
 Frame = +1

Query: 7   QRVWKAKLSGRNQHFLWKVYIDGLPTGEVLNARKMVGDFNCPFCQNHMESSLHLFFQCEW 186
           Q++WK++ S + QHFLWK   + LP    L  R +  +  C  C +  E+  HL F+C +
Sbjct: 255 QKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTF 314

Query: 187 IRGVWFTAITSIRIDAHASWGVRNWLDEIMGWT---ENREDHIRSLGIYACLLLSCIWEH 357
            R  W  AI+SI I     W    +++  + W     N              LL  +W++
Sbjct: 315 ARLTW--AISSIPIPLGGEWADSIYVN--LYWVFNLGNGNPQWEKASQLVPWLLWRLWKN 370

Query: 358 RNKILFDARQKNRTSILNATE 420
           RN+++F  R+ N   +L   E
Sbjct: 371 RNELVFRGREFNAQEVLRRAE 391


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
 Frame = +1

Query: 10   RVWKAKLSGRNQHFLWKVYIDGLPTGEVLNARKMVGDFNCPFCQNHMESSLHLFFQCEWI 189
            + W + L  + + F W++    L T   L  R ++    C  C+   E+  HLF  C   
Sbjct: 1056 KFWASDLLPKWKFFTWRLLNKALATSSNLRKRNILIQEMCSLCKQDKENESHLFRDCNIS 1115

Query: 190  RGVWFTAITSIRIDAHASWGVRNWLDEIMG--WTENREDHIRSLGIYACL-LLSCIWEHR 360
            R VW +++  IRI       + +W+   +   W   +ED ++S  +   +  L  IW HR
Sbjct: 1116 RHVWASSLLGIRICPMTVISIEDWIKNFLKLLW---KEDGVKSPRVSEFIATLWAIWIHR 1172

Query: 361  NKILFDARQKNRTSILNATEALWK 432
            N ++F + + N  +I+N   AL K
Sbjct: 1173 NNVIFRSEEVNPVAIMNLKIALLK 1196