BLASTX nr result

ID: Coptis25_contig00023589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023589
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]   118   6e-25
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   110   2e-22
emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]   104   9e-21
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]   103   3e-20
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...   102   6e-20

>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score =  118 bits (296), Expect = 6e-25
 Identities = 76/189 (40%), Positives = 102/189 (53%), Gaps = 12/189 (6%)
 Frame = -2

Query: 539 RMKQVKWLDLPDHVLPLISQKLTRIKDCIRFGAVCHAWRTI---------YSNNPCILPR 387
           RM+   W  LPD +L  I   L  I D IRFGAVC  W ++          +  P + P 
Sbjct: 127 RMEYSGWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPP 186

Query: 386 QLPLLML---PINRDNQYRGLYDPSEKRVYDFQLPVPHNYYCRGSSEGWLVTVYEKQVVR 216
            LP LM+   P ++D+  R  Y  + +++  F LPVP      GSS GWL+T  E   V 
Sbjct: 187 PLPWLMVLSKPNSKDS--RSFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDETNAVS 244

Query: 215 LLNPFLSVDNEIELPPLTAFELHVDDMIVNEAYLYKAVLSASPTSDPDNYVVMAIYGGCC 36
           LL+PF      I LPPLT  ++    +   E +L+K VLSA+PTS+PD++V+M IYG   
Sbjct: 245 LLHPFSR--QVIRLPPLTRLKIPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHDK 302

Query: 35  KLAFYKPGD 9
            LAF K GD
Sbjct: 303 GLAFIKSGD 311


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  110 bits (275), Expect = 2e-22
 Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
 Frame = -2

Query: 521  WLDLPDHVLPLISQKLTRIKDCIRFGAVCHAWRTIYSNNPCILPR-QLPLLMLPINRDNQ 345
            W  +PD  L LI++KL  ++D +RFG VC +W +I+ +  C  P  + P LML    +++
Sbjct: 922  WSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEKENSE 981

Query: 344  YRGLYDPSEKRVYDFQLPVPHNYYCRGSSEGWLVTVYEKQVVRLLNPFLSVDNEIELPPL 165
             RG Y P   +VY+ +LP     +C GS  GWLVT+     + LLNP   V  +I LP L
Sbjct: 982  IRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRV--QILLPSL 1039

Query: 164  -------TAFELHVDDMIVNEAYLYKAVLSASPTSDPDNYVVMAIYGGCCKLAFYKPG 12
                   T  +         + ++YKAVLS++P+S PD   VM IY    +LAF KPG
Sbjct: 1040 RACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS-PD-CAVMIIYSDYGRLAFTKPG 1095


>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score =  104 bits (260), Expect = 9e-21
 Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
 Frame = -2

Query: 536 MKQVKWLDLPDHVLPLISQKLTRIKDCIRFGAVCHAWRTIYSNNPCILPRQL----PLLM 369
           M    W  LP  ++ LI  +L    D IRFG VC  W  +       + + L    P+L+
Sbjct: 1   MSYTDWSKLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLL 60

Query: 368 LPINRDNQYRGLYDPSEKRVYDFQLPVPHNYYCRGSSEGWLVTV-----YEKQVVRLLNP 204
           LP N+D++   LYD  +K+ Y  Q+P   + +C  S  GWL+T+     YE   +  LNP
Sbjct: 61  LPPNKDDEAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYE---ICCLNP 117

Query: 203 FLSVDNEIELPPLTAFELHVDDMIVN--EAYLYKAVLSASPTSDPDNYVVMAIYGGCCKL 30
              V  +I+LPP   FE    D+     E +L K VLS++P+    N V+MAI+    KL
Sbjct: 118 ISGV--QIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYKKL 175

Query: 29  AFYKPGD 9
           AF KPGD
Sbjct: 176 AFCKPGD 182


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score =  103 bits (256), Expect = 3e-20
 Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
 Frame = -2

Query: 536 MKQVKWLDLPDHVLPLISQKLTRIKDCIRFGAVCHAWRTIYSNNPCILPRQL----PLLM 369
           M    W  LP  ++ LI  +L    D IRFG VC  W  +       + + L    P+L+
Sbjct: 1   MSYTDWSKLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLL 60

Query: 368 LPINRDNQYRGLYDPSEKRVYDFQLPVPHNYYCRGSSEGWLVTV-----YEKQVVRLLNP 204
           LP N+D+    LYD  +K+ Y  Q+P   + +C  S  GWL+T+     YE   +  LNP
Sbjct: 61  LPPNKDDGAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYE---ICCLNP 117

Query: 203 FLSVDNEIELPPLTAFELHVDDMIVN--EAYLYKAVLSASPTSDPDNYVVMAIYGGCCKL 30
              V  +I+LPP   FE    D+     E +L K VLS++P+    N V+MAI+    KL
Sbjct: 118 ISGV--QIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYNKL 175

Query: 29  AFYKPGD 9
           AF KPGD
Sbjct: 176 AFCKPGD 182


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score =  102 bits (253), Expect = 6e-20
 Identities = 68/193 (35%), Positives = 98/193 (50%), Gaps = 22/193 (11%)
 Frame = -2

Query: 521 WLDLPDHVLPLISQKLTRIKDCIRFGAVCHAWRTIYSNNPCILPRQLPLLMLPINRDN-Q 345
           W +LP  +L  I+QK T   D I   AVC +W +     P  L  +LP L+LP ++DN  
Sbjct: 4   WSELPQELLQTITQKQTNYVDYISTRAVCKSWWSAIPKKPHDLLCRLPWLLLPHHKDNPN 63

Query: 344 YRGLYDPSEKRVYDFQLPVPHNYYCRGSSEGWLVTVYEKQVVRLLNPFLSVDNEIELPPL 165
           +RG Y+PS+ + Y  +LP   +  C GSS GWLV V +   + LLNP     + IELP L
Sbjct: 64  HRGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPL--TKSRIELPSL 121

Query: 164 TAFELHVDDMI------------------VNEAYLYKAVLSASPTSDPDNYVVMAIY--- 48
           + F     ++I                  + E Y+ KA++S  P+    +++VMAIY   
Sbjct: 122 STFPNFPTEVIYQNSRNLNEYFIRNNKLRIRETYIRKAIVSEDPS--VGSFMVMAIYKTI 179

Query: 47  GGCCKLAFYKPGD 9
            G   +AF K GD
Sbjct: 180 NGSENIAFCKSGD 192


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