BLASTX nr result
ID: Coptis25_contig00023588
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00023588
(1741 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc... 190 1e-45
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc... 186 1e-44
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi... 180 9e-43
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2... 171 6e-40
gb|ABK92768.1| unknown [Populus trichocarpa] 170 1e-39
>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 398
Score = 190 bits (482), Expect = 1e-45
Identities = 130/409 (31%), Positives = 208/409 (50%), Gaps = 18/409 (4%)
Frame = +3
Query: 318 DIAIEILSRLPMESIYDFKCVSKRWCELFSHPSFISAHFQRSARTMSG-IFVQGLHYCPC 494
DI ++LSRLP +++ + + VSK W L SF+ A FQ+ +SG +F + CP
Sbjct: 6 DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRKCP- 64
Query: 495 ENYIDSEVVDYISTGKKGRHATSKNILGFLPEEVVVITSSNGILLCRSIFEHYGSNHCSR 674
ID Y+ + K + GFLPE+VV++ S NG++ CRS C R
Sbjct: 65 ---IDISTFTYMPIDADSK--VQKMVFGFLPEDVVILQSCNGLVCCRS---------CFR 110
Query: 675 ERMKIRYKVILYVCNPFTKEWITLKPRGKYINGCCYGFAYNAFGSVGSP-----NFEVVM 839
+ + +YVCNP K+W++ + + AF + P NF+VV
Sbjct: 111 TQHSTTHSTTIYVCNPLFKKWVSFE----VAQLDSFSSIALAFDPILDPVNTATNFKVVR 166
Query: 840 VQPPLQLGKDP----FKFKIYTSTTGTWRTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGH 1007
+Q QL + + F+IY+S TGTW+ S EVC LL++ + GV +WLT
Sbjct: 167 IQ---QLENEQEEMYYTFEIYSSETGTWKESSEVCYSDGNLLNNNGTYAKGVLHWLTDTD 223
Query: 1008 TILAFDLKEERSRVIKLPGNAMVTHKPGEGVCLGVSEANLHFISLTVVELMVWILEHDNL 1187
ILAFD ++E S ++ P A+ G C+G S+ LHFI + ++VW L+ D
Sbjct: 224 QILAFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLD-DYF 282
Query: 1188 RPKWSVKHNKPQVEMLHPLLRGCDRRPS-YLPCYPDIPNRN-------MHPYAFQDDILY 1343
KW++KH+K Q++M+ D P+ + Y + R M P+AF+D++L
Sbjct: 283 EAKWTLKHSK-QLQMIE------DENPNMFFKLYKIMQRRRLPGMEPYMDPWAFKDEVLL 335
Query: 1344 MRMSWSMFSYNIKTGEYEEEELCSCSKLDAATAIATGTPIVVPYCKSLL 1490
MR+ +++ Y+I+TG+ E+C+ + L + +P V+PY SL+
Sbjct: 336 MRVFSTVYFYHIETGKV--VEVCNVASLGPNPFV---SPPVIPYSLSLI 379
>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 399
Score = 186 bits (473), Expect = 1e-44
Identities = 128/409 (31%), Positives = 206/409 (50%), Gaps = 18/409 (4%)
Frame = +3
Query: 318 DIAIEILSRLPMESIYDFKCVSKRWCELFSHPSFISAHFQRSARTMSG-IFVQGLHYCPC 494
DI ++LSRLP +++ + + VSK W L SF+ A FQ+ +SG +F + CP
Sbjct: 6 DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRKCP- 64
Query: 495 ENYIDSEVVDYISTGKKGRHATSKNILGFLPEEVVVITSSNGILLCRSIFEHYGSNHCSR 674
ID Y+ + K + GFLPE+VV++ S NG++ CRS C R
Sbjct: 65 ---IDISTFTYMPIDADSK--VQKMVFGFLPEDVVILQSCNGLVCCRS---------CFR 110
Query: 675 ERMKIRYKVILYVCNPFTKEWITLKPRGKYINGCCYGFAYNAFGSVGSP-----NFEVVM 839
+ + +YVCNP K+W++ + + AF + P NF+VV
Sbjct: 111 TQHSTTHSTTIYVCNPLFKKWVSFE----VAQLDSFSSIALAFDPILDPVNTATNFKVVR 166
Query: 840 VQPPLQLGKDP----FKFKIYTSTTGTWRTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGH 1007
+Q QL + + F+IY+S TGTW+ S EVC LL + + GV +WLT
Sbjct: 167 IQ---QLENEQEEMYYTFEIYSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWLTDTD 223
Query: 1008 TILAFDLKEERSRVIKLPGNAMVTHKPGEGVCLGVSEANLHFISLTVVELMVWILEHDNL 1187
ILAFD ++E S ++ P A+ G C+G S+ LHFI + ++VW L+ D
Sbjct: 224 QILAFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLD-DYF 282
Query: 1188 RPKWSVKHNKPQVEMLHPLLRGCDRRPS-YLPCYPDIPNRN-------MHPYAFQDDILY 1343
KW++KH+K Q++M+ D P+ + Y + + M P+AF+D++L
Sbjct: 283 EAKWTLKHSK-QLQMIE------DENPNMFFKLYKIMQRKRLPGMEPYMDPWAFKDEVLL 335
Query: 1344 MRMSWSMFSYNIKTGEYEEEELCSCSKLDAATAIATGTPIVVPYCKSLL 1490
MR+ +++ Y+ +TG+ E+C+ + L + +P V+PY SL+
Sbjct: 336 MRVFSTVYFYHTETGKV--VEVCNVASLGPNPFV---SPPVIPYSLSLI 379
>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
gi|296088512|emb|CBI37503.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 180 bits (457), Expect = 9e-43
Identities = 136/399 (34%), Positives = 198/399 (49%), Gaps = 8/399 (2%)
Frame = +3
Query: 315 DDIAIEILSRLPMESIYDFKCVSKRWCELFSHPSFISAHFQRSARTMSGIFVQGLHYCPC 494
DDI +++LSRLP +++ KCV KRW + S SFI QR ++G F Q Y C
Sbjct: 4 DDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRP-EPLAGFFFQE-RYQWC 61
Query: 495 ENYIDSEVVDYISTGKKGRHATSKNILGFLPEEVVVITSSNGILLCRSIFEHYGSNHCSR 674
+ D + YI +G + I FLPE+VV++ S NG++ CRS+F +
Sbjct: 62 DE--DISTISYIPATMEGTQV-QQTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPS---- 114
Query: 675 ERMKIRYKVILYVCNPFTKEWITLKPRGKYINGCCYGFAYNAFGS-VGSP-NFEVVMV-Q 845
++VCNP K+WI L YG A+N F S + P NF+VV V Q
Sbjct: 115 ----------IFVCNPSNKQWIRLLETTPDKESS-YGLAFNPFQSPIDMPTNFKVVRVSQ 163
Query: 846 PPLQLGKDP-FKFKIYTSTTGTWRTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTILAF 1022
+ D F F+IY+S G W+ SKE+C L ++ F G+ +WLT G +L+F
Sbjct: 164 AQTDMDDDSYFSFEIYSSQAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLSF 223
Query: 1023 DLKEERSRVIKLPGNAM-VTHKPGEGVCLGVSEANLHFISLTVVELMVWILEHDNLRPKW 1199
+++ E S +I P + +T P +C+G S LH+I ++ L VW LE D W
Sbjct: 224 NIENELSWLISAPFPTIHLTAIP--EMCIGESRGRLHYIMISEDGLQVWALE-DYYDSNW 280
Query: 1200 SVKHN---KPQVEMLHPLLRGCDRRPSYLPCYPDIPNRNMHPYAFQDDILYMRMSWSMFS 1370
S+ H+ + E LL R + IP M P AF+D +L MR+S +
Sbjct: 281 SLVHSTTLEVMEEENSQLLYNTRDRVAQRISIDSIP--WMDPLAFKDGLLLMRVSTKIIL 338
Query: 1371 YNIKTGEYEEEELCSCSKLDAATAIATGTPIVVPYCKSL 1487
Y I G + EELC+ SKL + P+V+PY +L
Sbjct: 339 YCI--GTRKMEELCNLSKLGRNSIFG---PLVIPYSLNL 372
>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 171 bits (433), Expect = 6e-40
Identities = 134/409 (32%), Positives = 201/409 (49%), Gaps = 11/409 (2%)
Frame = +3
Query: 312 DDDIAIEILSRLPMESIYDFKCVSKRWCELFSHPSFISAHFQRSARTMSGIFVQGLH-YC 488
D DI ++LSRL + + KCVSK W +L S SFI A Q+ +SG F Q H YC
Sbjct: 8 DTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKK-EPLSGFFFQQRHRYC 66
Query: 489 PCENYIDSEVVDYISTGKKGRHATSKNILGFLPEEVVVITSSNGILLCRSIFEHYGSNHC 668
P D + + Y R+ +++ FLP++VVV+ NG++ CRS +
Sbjct: 67 PD----DIKTITYFPVE---RNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDP--- 116
Query: 669 SRERMKIRYKVILYVCNPFTKEWITL--KPRGKYINGCCYGFAYNAFG--SVGSPNFEVV 836
+YVCNP EW L K GK A+N F SV NF+VV
Sbjct: 117 -----------AIYVCNPLNSEWWKLDWKEPGKE---SFIALAFNPFQDISVNLTNFKVV 162
Query: 837 MV-QPPLQLGKDPFKFKIYTSTTGTWRTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTI 1013
Q + + F F+IY S T W+ SKEVC + L ++ F+ G+ +WLT G I
Sbjct: 163 RPRQFETEQEEAYFSFEIYASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQI 222
Query: 1014 LAFDLKEERSRVIK--LPGNAMVTHKPGEGVCLGVSEANLHFISLTVVELMVWILEHDNL 1187
L F+++ E + +I LP T C+G SE L+++ ++ L VW+LE D
Sbjct: 223 LTFNVENELALLISTPLPAGEFNTR---PHACIGESEGQLYYVLISEEGLHVWVLE-DYF 278
Query: 1188 RPKWSVKHNK--PQVEMLH-PLLRGCDRRPSYLPCYPDIPNRNMHPYAFQDDILYMRMSW 1358
WS+K++K Q+E H ++ R D P M P AF+D +L +R+S
Sbjct: 279 DSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQRIDDRP--WMDPLAFKDGVLVVRISN 336
Query: 1359 SMFSYNIKTGEYEEEELCSCSKLDAATAIATGTPIVVPYCKSLLRVQAN 1505
+++ Y++ T + EE+ SK A + + +PIV+PY SL+ + N
Sbjct: 337 TIYLYHVDTSKM--EEVGETSKFGAMSWV---SPIVLPYTMSLVPLGLN 380
>gb|ABK92768.1| unknown [Populus trichocarpa]
Length = 384
Score = 170 bits (431), Expect = 1e-39
Identities = 133/404 (32%), Positives = 199/404 (49%), Gaps = 11/404 (2%)
Frame = +3
Query: 312 DDDIAIEILSRLPMESIYDFKCVSKRWCELFSHPSFISAHFQRSARTMSGIFVQGLH-YC 488
D DI ++LSRL + + KCVSK W +L S SFI A Q+ +SG F Q H YC
Sbjct: 8 DTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKK-EPLSGFFFQQRHRYC 66
Query: 489 PCENYIDSEVVDYISTGKKGRHATSKNILGFLPEEVVVITSSNGILLCRSIFEHYGSNHC 668
P D + + Y R+ +++ FLP++VVV+ NG++ CRS +
Sbjct: 67 PD----DIKTITYFPVE---RNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDP--- 116
Query: 669 SRERMKIRYKVILYVCNPFTKEWITL--KPRGKYINGCCYGFAYNAFG--SVGSPNFEVV 836
+YVCNP EW L K GK A+N F SV NF+VV
Sbjct: 117 -----------AIYVCNPLNSEWWKLDWKEPGKE---SFIALAFNPFQDISVNLTNFKVV 162
Query: 837 MV-QPPLQLGKDPFKFKIYTSTTGTWRTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTI 1013
Q + + F F+IY S T W+ SKEVC + L ++ F+ G+ +WLT G I
Sbjct: 163 RPRQFETEQEEAYFSFEIYASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQI 222
Query: 1014 LAFDLKEERSRVIK--LPGNAMVTHKPGEGVCLGVSEANLHFISLTVVELMVWILEHDNL 1187
L F+++ E + +I LP T C+G SE L+++ ++ L VW+LE D
Sbjct: 223 LTFNVENELALLISTPLPAGEFNTR---PHACIGESEGQLYYVLISEEGLHVWVLE-DYF 278
Query: 1188 RPKWSVKHNK--PQVEMLH-PLLRGCDRRPSYLPCYPDIPNRNMHPYAFQDDILYMRMSW 1358
WS+K++K Q+E H ++ R D P M P AF+D +L +R+S
Sbjct: 279 DSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQRIDDRP--WMDPLAFKDGVLVVRISN 336
Query: 1359 SMFSYNIKTGEYEEEELCSCSKLDAATAIATGTPIVVPYCKSLL 1490
+++ Y++ T + EE+ SK A + + +PIV+PY SL+
Sbjct: 337 TIYLYHVDTSKM--EEVGETSKFGAMSWV---SPIVLPYTMSLV 375