BLASTX nr result

ID: Coptis25_contig00023575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023575
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326643.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002304278.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_003538738.1| PREDICTED: zinc finger protein ZAT9-like [Gl...    57   2e-06
ref|XP_003517419.1| PREDICTED: zinc finger protein ZAT9-like [Gl...    57   2e-06
ref|XP_003608704.1| hypothetical protein MTR_4g100860 [Medicago ...    57   2e-06

>ref|XP_002326643.1| predicted protein [Populus trichocarpa] gi|222833965|gb|EEE72442.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/108 (39%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   QDRESETEXXXXXXXXXXXXXXXXGFGEQQHVQHHIQMNNSQENFMVXXXXXXXXXXIKT 180
           QDRESETE                GFGE Q     ++     +N              ++
Sbjct: 88  QDRESETESRNPTRRRSKRIRKSCGFGESQKQDFDVKKVVDFKN----------PSWGES 137

Query: 181 EFVIEPEPVSSVSDTTPEEDVALCLMMLSRGIRTRNN-KQVENKGYRD 321
               EPEPVSSVSDT+PEEDVA CLMMLSR +  RN+ ++V+ +G +D
Sbjct: 138 SSPAEPEPVSSVSDTSPEEDVARCLMMLSRDVWMRNDEEEVQEQGGKD 185


>ref|XP_002304278.1| predicted protein [Populus trichocarpa] gi|222841710|gb|EEE79257.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +1

Query: 193 EPEPVSSVSDTTPEEDVALCLMMLSRGIRTRN-NKQVENKGYRD 321
           EPEPVSSVSDT+PEEDVA CLMMLSR +  RN  ++ E +G +D
Sbjct: 92  EPEPVSSVSDTSPEEDVARCLMMLSRDVWMRNIEEEYEEQGGKD 135


>ref|XP_003538738.1| PREDICTED: zinc finger protein ZAT9-like [Glycine max]
          Length = 288

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +1

Query: 175 KTEFVIEPEPVSSVSDTTPEEDVALCLMMLSRGIRTRNN 291
           K  F+  PEPVSSVSDT+PEEDVA+CLMMLSR   ++NN
Sbjct: 118 KLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNN 156


>ref|XP_003517419.1| PREDICTED: zinc finger protein ZAT9-like [Glycine max]
          Length = 298

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +1

Query: 175 KTEFVIEPEPVSSVSDTTPEEDVALCLMMLSRGIRTRNN 291
           K  F+  PEPVSSVSDT+PEEDVA+CLMMLSR   ++NN
Sbjct: 124 KLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNN 162


>ref|XP_003608704.1| hypothetical protein MTR_4g100860 [Medicago truncatula]
           gi|355509759|gb|AES90901.1| hypothetical protein
           MTR_4g100860 [Medicago truncatula]
          Length = 315

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/102 (39%), Positives = 50/102 (49%)
 Frame = +1

Query: 1   QDRESETEXXXXXXXXXXXXXXXXGFGEQQHVQHHIQMNNSQENFMVXXXXXXXXXXIKT 180
           QDRESETE                   +  H Q+ +     + +FMV            +
Sbjct: 91  QDRESETESKNNPTRQQRSKRNRKQNNDNNH-QNFLPQKKPKPSFMVPTTP--------S 141

Query: 181 EFVIEPEPVSSVSDTTPEEDVALCLMMLSRGIRTRNNKQVEN 306
           +F  E EPVSSVSDT+PEEDVA+CLMMLSR   +R    V N
Sbjct: 142 QFT-EQEPVSSVSDTSPEEDVAMCLMMLSRDKWSRKMNNVNN 182


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