BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023574
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    71   2e-10
emb|CBI15337.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]    60   5e-07
dbj|BAJ24854.1| S-locus linked F-box protein type-2 [Petunia x h...    59   9e-07

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 43/114 (37%), Positives = 65/114 (57%)
 Frame = -1

Query: 493 VLRLLPEIVSDILSRLPIEDVMRPRCICKGWYALTETHHFVHLHLSRALCLPVRIILEPE 314
           +L L  +I++DILS LPIED++R R +CK WY LT+  +F  L   R      R++   +
Sbjct: 17  LLNLPLDIMADILSLLPIEDILRCRSVCKTWYGLTKDSYFFKLQFRRTFYHMPRLMFISK 76

Query: 313 HQRPLTSFYVVDAKDGM*RAKEIPVANVHGNYICTLSSCHGLLCGVS*EAEVNP 152
            +    S +++D K    +A+EI +  V G  +  +SSC+GLLC  S E   NP
Sbjct: 77  SE---NSVFLLDGKQC--KAREIALPTVLGRNLIVMSSCNGLLCLAS-EESPNP 124


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
 Frame = -1

Query: 484 LLPEIVSDILSRLPIEDVMRPRCICKGWYALTETHHFVHLHLSRALCLPVRIILEP---- 317
           LLPE++S+ILSRLPIE ++R R +CK W ++ ++  F++L   ++   P R+IL+P    
Sbjct: 154 LLPELISEILSRLPIELILRCRSVCKTWNSVIQSPLFINLQARKSHNQPSRVILKPIFGG 213

Query: 316 EHQRPLTSFYVVDAKDGM*RAKEIPVANVHGNYICTLSSCHGLLCGVS*EAEVNPQHKKS 137
                + S +++D ++   +++ I   +   + +  +SSC+GLLC               
Sbjct: 214 VTATTMHSLFLLDTEER--KSRRIHDKSWRFSGLQIMSSCNGLLC--------------- 256

Query: 136 SCNCLQCVSSSSSEAETLFIYYPLVKESLELPKAE 32
                    +S SE   ++I  P+ +E + LP  E
Sbjct: 257 --------ITSDSELGPVYISNPITREFVILPSPE 283


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/148 (25%), Positives = 74/148 (50%)
 Frame = -1

Query: 484 LLPEIVSDILSRLPIEDVMRPRCICKGWYALTETHHFVHLHLSRALCLPVRIILEPEHQR 305
           L PE+  ++L+RLP+E ++R R +CK W  + ++ +F+ L L      P R I++ + + 
Sbjct: 21  LPPEMFCEVLARLPVESILRFRSVCKSWCRMIQSPYFISLQLGVTKNKPCRFIVQSQREG 80

Query: 304 PLTSFYVVDAKDGM*RAKEIPVANVHGNYICTLSSCHGLLCGVS*EAEVNPQHKKSSCNC 125
            ++S Y+VD +D   +A+EI +  +               C    + ++     +  C+ 
Sbjct: 81  DMSSLYLVDIED--LKAREIQLEKIK--------------CRTRLKFKLPALGVRCFCDG 124

Query: 124 LQCVSSSSSEAETLFIYYPLVKESLELP 41
             C+ +S    + + I  P+ KES+ LP
Sbjct: 125 FLCM-ASEKRLDPVCICNPITKESVILP 151


>ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]
          Length = 408

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
 Frame = -1

Query: 493 VLRLLPEIVSDILSRLPIEDVMRPRCICKGWYALTETHHFVHLHLSRALCLPVRIILEPE 314
           ++RL  EI+ +IL RLP++ ++R RC+CK W  L     F   HL R    P+  IL P 
Sbjct: 1   MVRLAEEIIEEILLRLPVKSLLRFRCVCKAWCTLISQPQFTKAHLCRQRTHPITQILVPP 60

Query: 313 --HQRPLTSFYV-VDAKDGM*RAKEIPVANVHGNYICTLSSCHGLLC 182
               +P   F V +D   G+  +K              L SCHGLLC
Sbjct: 61  SVDSQPNDGFSVDLDFPLGLSSSK---------GSTAILDSCHGLLC 98


>dbj|BAJ24854.1| S-locus linked F-box protein type-2 [Petunia x hybrida]
          Length = 389

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
 Frame = -1

Query: 502 EQAVLRLLPE-IVSDILSRLPIEDVMRPRCICKGWYALTETHHFVHLHLSRALCLPVRII 326
           E  V++ LPE +V  +L   P++ ++R +CI K WYAL  TH F+ LHL+R +     +I
Sbjct: 2   ENKVIKKLPEDVVIYMLLMFPVKSLLRLKCISKAWYALILTHTFIKLHLNRIITTEDELI 61

Query: 325 L-------EPEHQRPLTSFYVV-DAKDGM*RAKEIPVANVHGN----YICTLSSCHGLL 185
           L       EPE  + + SF+   D KD    + ++ V+++       +   +  CHGL+
Sbjct: 62  LFIRTFREEPEQLKSIASFFSCDDNKDLHILSPDLDVSDLTSTCDTIFNQLIGPCHGLI 120