BLASTX nr result

ID: Coptis25_contig00023571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023571
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779...    60   2e-07
ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat...    59   3e-07
ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat...    59   3e-07

>ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3    GIQPDIFTLCTLINCYSNMGRPDFGFAILASILKRGFEPDAV 128
            GIQPD+FTL  LINC+ +MG+  F F+ILA ILKRG+ PD +
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTI 997



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   GIQPDIFTLCTLINCYSNMGRPDFGFAILASILKRGFEPDAV 128
           GIQPD+ TL  LINC+ +MG+  FGF++LA ILKRG+ PD V
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTV 130


>ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   GIQPDIFTLCTLINCYSNMGRPDFGFAILASILKRGFEPDAV 128
           GIQPD+FTL  LINC+ +MG+  FGF++LA ILKRG+ P  V
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTV 378


>ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   GIQPDIFTLCTLINCYSNMGRPDFGFAILASILKRGFEPDAV 128
           GIQPD+ TL  LINC+ +MG+  FGF++LA ILKRG+ PD V
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTV 130


>ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   GIQPDIFTLCTLINCYSNMGRPDFGFAILASILKRGFEPDAV 128
           GIQPD+FTL  LINC+ +MG+  FGF++LA ILKRG+ P  V
Sbjct: 88  GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTV 129


>ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   GIQPDIFTLCTLINCYSNMGRPDFGFAILASILKRGFEPDAV 128
           GIQPD+ TL  LINC+ +MG+  FGF++LA ILKRG+ PD V
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTV 130


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