BLASTX nr result

ID: Coptis25_contig00023566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023566
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273970.1| PREDICTED: CASP-like protein At2g28370 [Viti...   264   1e-68
gb|AFK37211.1| unknown [Lotus japonicus]                              254   2e-65
ref|NP_001236668.1| uncharacterized protein LOC100306043 [Glycin...   253   4e-65
gb|AFY26899.1| membrane protein [Morella rubra]                       247   2e-63
ref|XP_004143253.1| PREDICTED: CASP-like protein 2-like [Cucumis...   244   2e-62

>ref|XP_002273970.1| PREDICTED: CASP-like protein At2g28370 [Vitis vinifera]
          Length = 178

 Score =  264 bits (675), Expect = 1e-68
 Identities = 131/180 (72%), Positives = 150/180 (83%)
 Frame = +3

Query: 129 MNMVHPSVHPIEAPPFTDGGAGVPPNRSWMKDVQGMPGTPGGLALRFSQFVFALTSLSIM 308
           MN+ HP+VHPIEAPP TD   G P  R+ MKD+QGMPGT GGL LRF QF FA  SL +M
Sbjct: 1   MNVSHPAVHPIEAPPLTDAANGAP--RARMKDIQGMPGTLGGLVLRFFQFAFAAVSLCVM 58

Query: 309 ASTTDFIDASAFRYLVAAVALQSLWSLSLAIVDIYALLVQRCLRNSPLISFFAIGDGITS 488
           A+T+DF   +AF YLVAAV+LQSLWSLSLAIVDIYALLV+RCLRNS ++S F +GDGITS
Sbjct: 59  ATTSDFPSVTAFCYLVAAVSLQSLWSLSLAIVDIYALLVRRCLRNSRIVSLFTVGDGITS 118

Query: 489 TLTFAAACASAGITVLLGNDLRACKDNNCRSFQTATAMAFISWFAASPSFILNFWSLASR 668
           TLTFAAACASAGITVL+GNDL  C  N+C  F+TATAMAF+SWFA SPSF+LNFWSLAS+
Sbjct: 119 TLTFAAACASAGITVLIGNDLDNCAVNHCTRFETATAMAFLSWFAVSPSFLLNFWSLASK 178


>gb|AFK37211.1| unknown [Lotus japonicus]
          Length = 176

 Score =  254 bits (648), Expect = 2e-65
 Identities = 126/180 (70%), Positives = 148/180 (82%)
 Frame = +3

Query: 129 MNMVHPSVHPIEAPPFTDGGAGVPPNRSWMKDVQGMPGTPGGLALRFSQFVFALTSLSIM 308
           M+MV PSVHP+EAPP TD    +      MKD+QGMPGT GGL LRF QF FAL SLS+M
Sbjct: 1   MSMVRPSVHPVEAPPLTDHATPIHT----MKDIQGMPGTLGGLLLRFLQFSFALVSLSVM 56

Query: 309 ASTTDFIDASAFRYLVAAVALQSLWSLSLAIVDIYALLVQRCLRNSPLISFFAIGDGITS 488
           A+T+DF   +AFRYLVAAV+LQSLWSLSLAI DIYA+LV+R  RN  ++S F++GDGITS
Sbjct: 57  ATTSDFPSVTAFRYLVAAVSLQSLWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGITS 116

Query: 489 TLTFAAACASAGITVLLGNDLRACKDNNCRSFQTATAMAFISWFAASPSFILNFWSLASR 668
           TLTF+AACASAGITVL+GNDL  C  N+C  F+TATAMAF+SWFAASPSFILNFW+LAS+
Sbjct: 117 TLTFSAACASAGITVLIGNDLNECAQNHCSRFETATAMAFMSWFAASPSFILNFWTLASK 176


>ref|NP_001236668.1| uncharacterized protein LOC100306043 [Glycine max]
           gi|255627369|gb|ACU14029.1| unknown [Glycine max]
          Length = 182

 Score =  253 bits (645), Expect = 4e-65
 Identities = 123/182 (67%), Positives = 147/182 (80%)
 Frame = +3

Query: 123 VEMNMVHPSVHPIEAPPFTDGGAGVPPNRSWMKDVQGMPGTPGGLALRFSQFVFALTSLS 302
           + M MVHPSVHPIEAPP T+    +   R  +KD QGMPGT GG  LRF+QF FAL SLS
Sbjct: 1   MSMAMVHPSVHPIEAPPMTEHAIAIAMPRHTLKDTQGMPGTLGGFLLRFAQFSFALVSLS 60

Query: 303 IMASTTDFIDASAFRYLVAAVALQSLWSLSLAIVDIYALLVQRCLRNSPLISFFAIGDGI 482
           +MA+T+DF   +AFRYLVAAV+LQSLWSLSL + D+YA+LV+R  RN  ++  F+IGDGI
Sbjct: 61  VMATTSDFPSVTAFRYLVAAVSLQSLWSLSLGVADMYAILVRRGYRNVRIVRLFSIGDGI 120

Query: 483 TSTLTFAAACASAGITVLLGNDLRACKDNNCRSFQTATAMAFISWFAASPSFILNFWSLA 662
           TSTLTF+AACASAGITVL+GNDL  C  N+C  F+TATAMAF+SWFAASPSFILNFW+LA
Sbjct: 121 TSTLTFSAACASAGITVLIGNDLNDCAQNHCSRFETATAMAFMSWFAASPSFILNFWTLA 180

Query: 663 SR 668
           S+
Sbjct: 181 SK 182


>gb|AFY26899.1| membrane protein [Morella rubra]
          Length = 179

 Score =  247 bits (631), Expect = 2e-63
 Identities = 123/180 (68%), Positives = 145/180 (80%)
 Frame = +3

Query: 129 MNMVHPSVHPIEAPPFTDGGAGVPPNRSWMKDVQGMPGTPGGLALRFSQFVFALTSLSIM 308
           MN+ H +VHP+E  P  +GG G PP R  MK++QGMPGTPGGLALR  QFVFA+ +L +M
Sbjct: 1   MNVTHSAVHPVEDLPTAEGGGGNPP-RVRMKNLQGMPGTPGGLALRVFQFVFAVGALCVM 59

Query: 309 ASTTDFIDASAFRYLVAAVALQSLWSLSLAIVDIYALLVQRCLRNSPLISFFAIGDGITS 488
           A+T+DF   +AF YLVAA +LQSLWS SLAI DIYALLV+R L+N  ++S F +GDGITS
Sbjct: 60  ATTSDFASVTAFCYLVAAASLQSLWSFSLAITDIYALLVKRSLQNRQVVSLFTVGDGITS 119

Query: 489 TLTFAAACASAGITVLLGNDLRACKDNNCRSFQTATAMAFISWFAASPSFILNFWSLASR 668
           TLTFAAACASAGITVL+ NDL  C  N+C +F+TAT MAFISWFAA PSFILNFWSLASR
Sbjct: 120 TLTFAAACASAGITVLIDNDLGVCSQNHCANFETATGMAFISWFAALPSFILNFWSLASR 179


>ref|XP_004143253.1| PREDICTED: CASP-like protein 2-like [Cucumis sativus]
           gi|449524708|ref|XP_004169363.1| PREDICTED: CASP-like
           protein 2-like [Cucumis sativus]
          Length = 179

 Score =  244 bits (622), Expect = 2e-62
 Identities = 121/180 (67%), Positives = 142/180 (78%)
 Frame = +3

Query: 129 MNMVHPSVHPIEAPPFTDGGAGVPPNRSWMKDVQGMPGTPGGLALRFSQFVFALTSLSIM 308
           MN+  PSVHP+EAPP T+G     P R  MKDVQGMPGT GGLALR  QFVFA  SL +M
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGP-RVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVM 59

Query: 309 ASTTDFIDASAFRYLVAAVALQSLWSLSLAIVDIYALLVQRCLRNSPLISFFAIGDGITS 488
           ++T+DF   +AFRYLVAAV LQ LWS SLA+VD YALLV+R LRN  ++  F +GD +TS
Sbjct: 60  STTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTS 119

Query: 489 TLTFAAACASAGITVLLGNDLRACKDNNCRSFQTATAMAFISWFAASPSFILNFWSLASR 668
           TLTF+AAC+SAGITVL+GNDL  C  N+C  F++ATAMAFISWFA SPSF+LNFWSLASR
Sbjct: 120 TLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179


Top