BLASTX nr result

ID: Coptis25_contig00023563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023563
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane p...   188   7e-46
sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane p...   188   9e-46
sp|P0DI60.1|CSPL_HELAN RecName: Full=CASP-like protein 1              188   9e-46
ref|XP_002273638.1| PREDICTED: casparian strip membrane protein ...   186   3e-45
ref|XP_002276085.1| PREDICTED: casparian strip membrane protein ...   178   9e-43

>sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane protein 3
          Length = 207

 Score =  188 bits (478), Expect = 7e-46
 Identities = 94/144 (65%), Positives = 103/144 (71%)
 Frame = -2

Query: 663 EKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPAFTFF 484
           ++ G KRGVAIFDFILRI            MGTTDQTLPF TQFFQF+ASYDDLP FTFF
Sbjct: 38  KRGGMKRGVAIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPTFTFF 97

Query: 483 VVANAIVTAYLVLSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXVYLAH 304
           V+ANAI + YLVLSLPFSI+ IVRP + G +LLLLI DTV+              VYLAH
Sbjct: 98  VIANAIASGYLVLSLPFSIVAIVRPHVTGVKLLLLILDTVLVAFTTAAAASAAAIVYLAH 157

Query: 303 NGNSTANWIAICQQFNDFCQRISG 232
           NGNS  NW AICQQFNDFCQR SG
Sbjct: 158 NGNSNTNWFAICQQFNDFCQRTSG 181


>sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane protein 1
          Length = 208

 Score =  188 bits (477), Expect = 9e-46
 Identities = 94/141 (66%), Positives = 101/141 (71%)
 Frame = -2

Query: 654 GWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPAFTFFVVA 475
           GW+RGV+IFDFILRI            MGTTDQTLPF TQFFQF+ASYDDLPAFTFFVVA
Sbjct: 42  GWRRGVSIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPAFTFFVVA 101

Query: 474 NAIVTAYLVLSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXVYLAHNGN 295
           N I + YLVLSLPFSI  IVRP     +LLL+IFDTVM              VYLAHNGN
Sbjct: 102 NGIASGYLVLSLPFSIATIVRPHAAAIKLLLIIFDTVMVAFTAAAAAAAAAIVYLAHNGN 161

Query: 294 STANWIAICQQFNDFCQRISG 232
           S  NW AICQQFNDFCQR+SG
Sbjct: 162 SKTNWFAICQQFNDFCQRVSG 182


>sp|P0DI60.1|CSPL_HELAN RecName: Full=CASP-like protein 1
          Length = 212

 Score =  188 bits (477), Expect = 9e-46
 Identities = 94/141 (66%), Positives = 105/141 (74%)
 Frame = -2

Query: 654 GWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPAFTFFVVA 475
           GWKRG+ I DFILRI         AT MGTT Q LPF TQFFQFKA Y+DLPAFTFFV+A
Sbjct: 46  GWKRGLGIIDFILRICAIAAALAAATAMGTTSQQLPFFTQFFQFKADYNDLPAFTFFVIA 105

Query: 474 NAIVTAYLVLSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXVYLAHNGN 295
           NA+  AYLVLSLPFSI+ IVRP I+GARL+LL+FDTV               VYLAHNGN
Sbjct: 106 NAMAGAYLVLSLPFSILCIVRPHILGARLMLLVFDTVAVPLVTAAASAAASIVYLAHNGN 165

Query: 294 STANWIAICQQFNDFCQRISG 232
           S ANW+AIC+QFNDFCQR+SG
Sbjct: 166 SDANWVAICRQFNDFCQRVSG 186


>ref|XP_002273638.1| PREDICTED: casparian strip membrane protein VIT_06s0080g00840
           [Vitis vinifera] gi|226713612|sp|A7QF77.1|CASP1_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_06s0080g00840 gi|296084880|emb|CBI28289.3| unnamed
           protein product [Vitis vinifera]
          Length = 201

 Score =  186 bits (473), Expect = 3e-45
 Identities = 94/143 (65%), Positives = 106/143 (74%)
 Frame = -2

Query: 660 KRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPAFTFFV 481
           K G KRG+AIFDFILR+          T MGTTDQTLPF TQFFQF+ASYDDLPAF+FFV
Sbjct: 33  KAGLKRGLAIFDFILRLSAIGAALAATTTMGTTDQTLPFFTQFFQFQASYDDLPAFSFFV 92

Query: 480 VANAIVTAYLVLSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXVYLAHN 301
           +ANAI + YL LSLPFSI+ IVRP  +GARLLL+I DTVM              VYLAHN
Sbjct: 93  IANAIASGYLFLSLPFSIVCIVRPHAMGARLLLVICDTVMVALTIAAAAAAAAIVYLAHN 152

Query: 300 GNSTANWIAICQQFNDFCQRISG 232
           GNS ANW+AICQQF+DFCQ +SG
Sbjct: 153 GNSNANWVAICQQFDDFCQSVSG 175


>ref|XP_002276085.1| PREDICTED: casparian strip membrane protein VIT_08s0007g02880
           [Vitis vinifera] gi|226713603|sp|A7PP95.1|CASP2_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_08s0007g02880 gi|297740155|emb|CBI30337.3| unnamed
           protein product [Vitis vinifera]
          Length = 209

 Score =  178 bits (451), Expect = 9e-43
 Identities = 88/141 (62%), Positives = 102/141 (72%)
 Frame = -2

Query: 654 GWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPAFTFFVVA 475
           GWK+G+AIFDF+LR+         AT MGTTD+TLPF TQFFQF+AS+DDLPAF FFVVA
Sbjct: 43  GWKKGLAIFDFLLRLAAIAATLAAATTMGTTDETLPFFTQFFQFQASFDDLPAFMFFVVA 102

Query: 474 NAIVTAYLVLSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXVYLAHNGN 295
            AI + YL LSLPFS++ I RP   G RLLL+I DTVM              VYLAHNG+
Sbjct: 103 TAIASGYLALSLPFSLVSIFRPHAQGIRLLLIISDTVMLALTTAGAASATAIVYLAHNGD 162

Query: 294 STANWIAICQQFNDFCQRISG 232
           S+ANWIAICQQF DFCQ +SG
Sbjct: 163 SSANWIAICQQFTDFCQSVSG 183


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