BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023559
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...    80   2e-13
ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    76   3e-12
ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi...    75   4e-12
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...    75   4e-12
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...    75   6e-12

>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = -2

Query: 240 KCDHVFHPECIDAWLASHTTCPVCRANLT---LDSNHPAADGNEVTEAQNQDSESNSDIE 70
           KCDHVFHPECIDAWLASH+TCPVCRANL+    DS H A D N V    N D++   DIE
Sbjct: 142 KCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRADDSNAVV---NSDTD-GGDIE 197

Query: 69  NQSHHSIT 46
            QS+  ++
Sbjct: 198 AQSNDVVS 205


>ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Cucumis sativus]
           gi|449518671|ref|XP_004166360.1| PREDICTED: E3
           ubiquitin-protein ligase ATL6-like [Cucumis sativus]
          Length = 379

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = -2

Query: 240 KCDHVFHPECIDAWLASHTTCPVCRANLT---LDSNHPAADGNEVTEAQNQDSESNSDIE 70
           KCDHVFHPECIDAWLASH+TCPVCRANL+    +S H   D N V    N D++   DIE
Sbjct: 142 KCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVV---NSDTD-GGDIE 197

Query: 69  NQS 61
            QS
Sbjct: 198 AQS 200


>ref|XP_003626315.1| RING finger protein [Medicago truncatula]
           gi|87240525|gb|ABD32383.1| Zinc finger, RING-type
           [Medicago truncatula] gi|355501330|gb|AES82533.1| RING
           finger protein [Medicago truncatula]
          Length = 361

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -2

Query: 240 KCDHVFHPECIDAWLASHTTCPVCRANLTLDSNHPAADGNEVTEAQNQDSESNSD-IENQ 64
           KCDHVFHPECID WL+SHTTCPVCRANL      P    + V E+Q QD E+ +D ++  
Sbjct: 138 KCDHVFHPECIDEWLSSHTTCPVCRANLV---PQPGDSVHGVPESQQQDVEAQNDAVQLP 194

Query: 63  SHHSITLQQASVYNLN 16
           +     L    V +LN
Sbjct: 195 TESDSVLLAPEVISLN 210


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = -2

Query: 240 KCDHVFHPECIDAWLASHTTCPVCRANLTLDSNHPA--ADGNEVTEAQNQDSESNSDIEN 67
           KCDHVFHPECIDAWLASH TCPVCRANLT     PA   D +   EA     ES+ D E+
Sbjct: 161 KCDHVFHPECIDAWLASHVTCPVCRANLT----EPAVPTDYSAAVEAAESAGESDHDGED 216

Query: 66  QSHHSITLQQASV 28
           +      +++ S+
Sbjct: 217 RRSEINAVREVSI 229


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/67 (52%), Positives = 44/67 (65%)
 Frame = -2

Query: 240 KCDHVFHPECIDAWLASHTTCPVCRANLTLDSNHPAADGNEVTEAQNQDSESNSDIENQS 61
           KCDHVFHP+CIDAWLASHTTCPVCR+NLT     P       T+      +S+SD+E Q+
Sbjct: 141 KCDHVFHPDCIDAWLASHTTCPVCRSNLTPQPVDPP------TQTTESLPDSSSDLEAQN 194

Query: 60  HHSITLQ 40
              + L+
Sbjct: 195 EAVVELE 201