BLASTX nr result

ID: Coptis25_contig00023558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023558
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518043.1| conserved hypothetical protein [Ricinus comm...   113   1e-23
ref|XP_002263384.1| PREDICTED: uncharacterized protein LOC100245...   112   3e-23
ref|XP_002885604.1| hypothetical protein ARALYDRAFT_342541 [Arab...   111   5e-23
ref|XP_002300157.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|NP_189033.1| uncharacterized protein [Arabidopsis thaliana] ...    97   1e-18

>ref|XP_002518043.1| conserved hypothetical protein [Ricinus communis]
           gi|223542639|gb|EEF44176.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/143 (42%), Positives = 91/143 (63%)
 Frame = +3

Query: 3   YVEDTIQLERDYEGLSCTLKLLESQGLDKLQLGTSAECCTFSTGSVVNQHEDYKFELLEL 182
           ++ED  +LE D E L C+L  + S+ ++K +     E   +ST +    H DY+FE+ +L
Sbjct: 100 HMEDFTRLESDIEMLKCSLDFISSKDVEKEKEVACREDL-YSTDA----HRDYEFEISKL 154

Query: 183 DHQIEKKRNTMSLLEDRSCILKRIEAVGQIEDMFTGIKVVDFDGSEIRLSLETFIPTLDD 362
           D QI K +  +  L+D   + KR++AV QIE+  +G+KV++FDGS IRLSL T++P LDD
Sbjct: 155 DDQIAKSKMILKSLQDFDSVFKRVDAVEQIEEALSGLKVIEFDGSCIRLSLRTYLPKLDD 214

Query: 363 LFSQQKMVFTSDPPTVNHELFIE 431
           +  Q K   T++P  VNHEL IE
Sbjct: 215 VMCQHKTEDTAEPSEVNHELLIE 237


>ref|XP_002263384.1| PREDICTED: uncharacterized protein LOC100245254 [Vitis vinifera]
           gi|298205214|emb|CBI17273.3| unnamed protein product
           [Vitis vinifera]
          Length = 425

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/145 (40%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   YVEDTIQLERDYEGLSCTLKLLESQGLDKLQLGTSAECCTFSTGSVVNQ--HEDYKFELL 176
           YVED+ QLE D E L  ++  + SQGL + + G   +  +     + ++  H D  FE+L
Sbjct: 105 YVEDSNQLESDLEVLKHSVDFVASQGLKRAEAGALVDYSSSVEDQLDSRTAHGDNNFEIL 164

Query: 177 ELDHQIEKKRNTMSLLEDRSCILKRIEAVGQIEDMFTGIKVVDFDGSEIRLSLETFIPTL 356
           +L++Q +K + T+  L+D     KR EA+ +IED  TG+KV+DF+G+ IRLSL TFIP L
Sbjct: 165 DLNYQTQKNKITLKSLQDLDYTFKRFEAIEKIEDALTGLKVIDFEGNCIRLSLSTFIPNL 224

Query: 357 DDLFSQQKMVFTSDPPTVNHELFIE 431
           + L  ++K+   ++P  +NHEL IE
Sbjct: 225 EGLLCEEKIEAVNEPSELNHELLIE 249


>ref|XP_002885604.1| hypothetical protein ARALYDRAFT_342541 [Arabidopsis lyrata subsp.
           lyrata] gi|297331444|gb|EFH61863.1| hypothetical protein
           ARALYDRAFT_342541 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/142 (40%), Positives = 91/142 (64%)
 Frame = +3

Query: 3   YVEDTIQLERDYEGLSCTLKLLESQGLDKLQLGTSAECCTFSTGSVVNQHEDYKFELLEL 182
           + +D+ +LERD EGL  +L  + SQ ++K +    +     S+  V   ++D KF++ EL
Sbjct: 106 HAQDSSRLERDLEGLLLSLDSMSSQDVEKSKENQPSS----SSMEVCEVNDDDKFKMFEL 161

Query: 183 DHQIEKKRNTMSLLEDRSCILKRIEAVGQIEDMFTGIKVVDFDGSEIRLSLETFIPTLDD 362
           ++Q+E+KR+ +  LED   + KR +A  Q+ED  TG+KV++FDG+ IRL L+T+IP LD 
Sbjct: 162 ENQMEEKRSILKSLEDLDSLRKRFDAAEQVEDALTGLKVLEFDGNFIRLQLQTYIPKLDS 221

Query: 363 LFSQQKMVFTSDPPTVNHELFI 428
           L  QQK   T++P  + HEL I
Sbjct: 222 LLGQQKFEHTTEPSELIHELLI 243


>ref|XP_002300157.1| predicted protein [Populus trichocarpa] gi|222847415|gb|EEE84962.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  104 bits (259), Expect = 9e-21
 Identities = 59/146 (40%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
 Frame = +3

Query: 6   VEDTIQLERDYEGLSCTLKLLESQGLDKLQLGTSAECCTFSTG----SVVNQHEDYKFEL 173
           +ED+ +LE D E + C+L L+ SQ   + + G   +   FS+G    +++N +E+ KFE+
Sbjct: 110 MEDSSELENDLEWMKCSLDLISSQRDREKEKGDE-QMEHFSSGENQSNLINTNEENKFEI 168

Query: 174 LELDHQIEKKRNTMSLLEDRSCILKRIEAVGQIEDMFTGIKVVDFDGSEIRLSLETFIPT 353
           L+LD+QIE+    +  ++D   + K  +A+ QIED+ +G+KV++FDG+ IRLSL T+IP 
Sbjct: 169 LKLDNQIEESTRILKSMQDLDSVCKWYDAIEQIEDVLSGLKVIEFDGTCIRLSLRTYIPK 228

Query: 354 LDDLFSQQKMVFTSDPPTVNHELFIE 431
            D LF  QK+  T+ P  +NHE  IE
Sbjct: 229 QDVLF-LQKIEETNVPYEINHEFLIE 253


>ref|NP_189033.1| uncharacterized protein [Arabidopsis thaliana]
           gi|1742965|emb|CAA70756.1| HAPp48,5 protein [Arabidopsis
           thaliana] gi|9294659|dbj|BAB03008.1| HAPp48,5 protein
           [Arabidopsis thaliana] gi|20259510|gb|AAM13875.1|
           putative HAPp48,5 protein [Arabidopsis thaliana]
           gi|21436469|gb|AAM51435.1| putative HAPp48,5 protein
           [Arabidopsis thaliana] gi|332643310|gb|AEE76831.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 421

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/142 (37%), Positives = 84/142 (59%)
 Frame = +3

Query: 3   YVEDTIQLERDYEGLSCTLKLLESQGLDKLQLGTSAECCTFSTGSVVNQHEDYKFELLEL 182
           + +D+ +L+RD EGL  +L  + SQ ++K +    +     S+  V    +D KF++ EL
Sbjct: 107 HAQDSSRLQRDLEGLLLSLDSMSSQDVEKSKENQPSS----SSMEVCEVIDDDKFKMFEL 162

Query: 183 DHQIEKKRNTMSLLEDRSCILKRIEAVGQIEDMFTGIKVVDFDGSEIRLSLETFIPTLDD 362
           ++Q+E+KR  +  LED   + KR +A  Q+ED  TG+KV++FDG+ IRL L T+I  LD 
Sbjct: 163 ENQMEEKRMILKSLEDLDSLRKRFDAAEQVEDALTGLKVLEFDGNFIRLQLRTYIQKLDG 222

Query: 363 LFSQQKMVFTSDPPTVNHELFI 428
              Q K    ++P  + HEL I
Sbjct: 223 FLGQHKFDHITEPSELIHELLI 244


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