BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023552
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...   149   4e-34
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        143   3e-32
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   142   6e-32
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   142   6e-32
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      141   1e-31

>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score =  149 bits (376), Expect = 4e-34
 Identities = 75/156 (48%), Positives = 107/156 (68%)
 Frame = -1

Query: 469 RGTENRAADALSRVVEEHASCQAMSTVHPLWLKEVMQSYERDDLMQTLIS*LTLNPTGVH 290
           RG EN+A DALSRV   +    A+S V P+W+ EV+ SYE D+  + LI+ ++++PT   
Sbjct: 219 RGRENKATDALSRV-RYNDQVVAISAVTPVWILEVLASYEGDEKCRDLITQISISPTAQP 277

Query: 289 NYSYASGIVRYKDKIYIRNNGYLRQKLIATIHSSSVCGHSGMQGSYQRAKSYFFWPGLKK 110
           NYS  +GI+RYK ++YI +N  L+++L+ T H S++ GHSG + +YQR K  F WP +K+
Sbjct: 278 NYSLKNGILRYKGRLYIGSNTGLKRQLLVTFHDSALGGHSGGRVTYQRLKLIFHWPRMKQ 337

Query: 109 DVMEFVSACDVCQRNKNEHVFPAGLLQPLPVLEHAW 2
           +V EFV   DVCQ+N  EHV   GLLQP+P+ E AW
Sbjct: 338 EVEEFVKLYDVCQKNNCEHVPYPGLLQPIPIPEMAW 373


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  143 bits (360), Expect = 3e-32
 Identities = 70/156 (44%), Positives = 98/156 (62%)
 Frame = -1

Query: 469  RGTENRAADALSRVVEEHASCQAMSTVHPLWLKEVMQSYERDDLMQTLIS*LTLNPTGVH 290
            +G EN+AADALSR+    A   + + + P W+ E++ SY  D     L S L + P G  
Sbjct: 809  KGKENKAADALSRIPSV-AQLFSTTIIVPTWITEILASYATDPKCTALESQLRITPQGHP 867

Query: 289  NYSYASGIVRYKDKIYIRNNGYLRQKLIATIHSSSVCGHSGMQGSYQRAKSYFFWPGLKK 110
             Y+  SGI+RYK+++Y+     LR KL  + H S++ GHSG + +YQRAK  F+WPG+KK
Sbjct: 868  PYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKK 927

Query: 109  DVMEFVSACDVCQRNKNEHVFPAGLLQPLPVLEHAW 2
            D+  +V  C VCQ+NK+EH    GLL PLP+ E AW
Sbjct: 928  DIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAW 963


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
           gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
           Japonica Group]
          Length = 866

 Score =  142 bits (357), Expect = 6e-32
 Identities = 72/156 (46%), Positives = 97/156 (62%)
 Frame = -1

Query: 469 RGTENRAADALSRVVEEHASCQAMSTVHPLWLKEVMQSYERDDLMQTLIS*LTLNPTGVH 290
           +G EN+AADALSR+ + +A     + + P W+ EV  SY  D     L S L + P    
Sbjct: 365 KGQENKAADALSRMQQLNAL--TTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHP 422

Query: 289 NYSYASGIVRYKDKIYIRNNGYLRQKLIATIHSSSVCGHSGMQGSYQRAKSYFFWPGLKK 110
            Y+   GI+RYKD I +     LR++L+ + H S++ GHSG + +YQR K  F+WPG+K 
Sbjct: 423 PYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKL 482

Query: 109 DVMEFVSACDVCQRNKNEHVFPAGLLQPLPVLEHAW 2
            V +FV AC VCQ+NK EH  PAGLLQPLP+ E AW
Sbjct: 483 AVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAW 518


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  142 bits (357), Expect = 6e-32
 Identities = 72/156 (46%), Positives = 97/156 (62%)
 Frame = -1

Query: 469 RGTENRAADALSRVVEEHASCQAMSTVHPLWLKEVMQSYERDDLMQTLIS*LTLNPTGVH 290
           +G EN+AADALSR+ + +A     + + P W+ EV  SY  D     L S L + P    
Sbjct: 144 KGQENKAADALSRMQQLNAL--TTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHP 201

Query: 289 NYSYASGIVRYKDKIYIRNNGYLRQKLIATIHSSSVCGHSGMQGSYQRAKSYFFWPGLKK 110
            Y+   GI+RYKD I +     LR++L+ + H S++ GHSG + +YQR K  F+WPG+K 
Sbjct: 202 PYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKL 261

Query: 109 DVMEFVSACDVCQRNKNEHVFPAGLLQPLPVLEHAW 2
            V +FV AC VCQ+NK EH  PAGLLQPLP+ E AW
Sbjct: 262 AVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAW 297


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  141 bits (355), Expect = 1e-31
 Identities = 71/182 (39%), Positives = 111/182 (60%)
 Frame = -1

Query: 547  QIMKTIWYSHIKYDLNSQSIK*ERRVRGTENRAADALSRVVEEHASCQAMSTVHPLWLKE 368
            Q + TIW   +   L     K   R +G +N AADALSR V+E + C A+S   P WL+E
Sbjct: 1014 QRLHTIWQQKMYTKLAGLQYKIVYR-KGVDNGAADALSRKVQEDSHCCAISHSVPTWLQE 1072

Query: 367  VMQSYERDDLMQTLIS*LTLNPTGVHNYSYASGIVRYKDKIYIRNNGYLRQKLIATIHSS 188
            V++ Y++D   + L++ L LN      +S   GI+R+K++I++  N  L+QK++  +H +
Sbjct: 1073 VVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDT 1132

Query: 187  SVCGHSGMQGSYQRAKSYFFWPGLKKDVMEFVSACDVCQRNKNEHVFPAGLLQPLPVLEH 8
            +V GHSG   +Y + K  F+WPG++ DV+++V +C VCQ++K +     GLLQPL V   
Sbjct: 1133 AVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQ 1192

Query: 7    AW 2
            AW
Sbjct: 1193 AW 1194