BLASTX nr result

ID: Coptis25_contig00023547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023547
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-li...   118   6e-25
ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
emb|CBI21106.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002283077.1| PREDICTED: flotillin-like protein 1 [Vitis v...   117   1e-24

>ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|222866322|gb|EEF03453.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/90 (66%), Positives = 68/90 (75%)
 Frame = +1

Query: 1   GTYLRTLLDALGGNYNALRDYLMINKGVFQELAKINAEAVQGLQPKISIWTXXXXXXXXX 180
           G Y+RTLLDALGGNY ALRDYLMIN G+FQE+A+INA+AV GLQPKISIWT         
Sbjct: 375 GVYIRTLLDALGGNYAALRDYLMINSGMFQEIARINADAVHGLQPKISIWT-NGNSGEAN 433

Query: 181 XXXXXXSAMNQVGGVYKMLPPLFKTVHEQT 270
                 +AM +V GVYKMLPPLFKTV +QT
Sbjct: 434 DGTGGGNAMKEVAGVYKMLPPLFKTVQDQT 463


>ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein 4-like
           [Cucumis sativus] gi|449493412|ref|XP_004159281.1|
           PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein
           4-like [Cucumis sativus]
          Length = 841

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/89 (66%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = +1

Query: 7   YLRTLLDALGGNYNALRDYLMINKGVFQELAKINAEAVQGLQPKISIWTXXXXXXXXXXX 186
           YLR+LL+ALGGNY+ALRDYLMIN G+FQE+AKINA+A++GLQPKIS+WT           
Sbjct: 377 YLRSLLEALGGNYSALRDYLMINGGLFQEVAKINADAIKGLQPKISVWTNGSGGQGLEGG 436

Query: 187 XXXXS-AMNQVGGVYKMLPPLFKTVHEQT 270
               S AM +V GVYKMLPPLF+TVHEQT
Sbjct: 437 SGAGSIAMKEVAGVYKMLPPLFQTVHEQT 465



 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1    GTYLRT--LLDALGGNYNALRDYLMINKGVFQELAKINAEA--VQGLQPKISIWTXXXXX 168
            GT L T  LLDALGGNY ALRDYLMIN G+FQ++A INA A  ++ LQP IS+WT     
Sbjct: 733  GTGLSTVSLLDALGGNYTALRDYLMINGGMFQDIANINANAIKIKRLQPMISVWT--NGR 790

Query: 169  XXXXXXXXXXSAMNQVGGVYKMLPPLFKTVHEQT 270
                       AM ++ GV++MLPPLF+T HEQT
Sbjct: 791  DGQGLGGAGNMAMKELSGVHQMLPPLFQTDHEQT 824


>ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|222855626|gb|EEE93173.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/90 (66%), Positives = 69/90 (76%)
 Frame = +1

Query: 1   GTYLRTLLDALGGNYNALRDYLMINKGVFQELAKINAEAVQGLQPKISIWTXXXXXXXXX 180
           G YLRTLLDALGGNY ALRDYLMIN G+++E+AKIN++AVQGLQPKISIWT         
Sbjct: 376 GVYLRTLLDALGGNYAALRDYLMINSGMYREIAKINSDAVQGLQPKISIWT-NGNSGETN 434

Query: 181 XXXXXXSAMNQVGGVYKMLPPLFKTVHEQT 270
                 +AM +V GVYKMLPPLF+TV EQT
Sbjct: 435 DGAGAGNAMKEVAGVYKMLPPLFQTVQEQT 464


>emb|CBI21106.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
 Frame = +1

Query: 1   GTYLRTLLDALGGNYNALRDYLMINKGVFQELAKINAEAVQGLQPKISIWT--XXXXXXX 174
           G YLRTLLDALGGNY ALRDY+M++ G FQE+AKINAEAV+GLQPKI++WT         
Sbjct: 344 GVYLRTLLDALGGNYAALRDYMMVSGGTFQEIAKINAEAVRGLQPKITVWTNGGGGAEAL 403

Query: 175 XXXXXXXXSAMNQVGGVYKMLPPLFKTVHEQT 270
                   +AM ++ GVYKMLPPLF TVHEQT
Sbjct: 404 DGGGSGGSTAMKEISGVYKMLPPLFSTVHEQT 435


>ref|XP_002283077.1| PREDICTED: flotillin-like protein 1 [Vitis vinifera]
          Length = 488

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
 Frame = +1

Query: 1   GTYLRTLLDALGGNYNALRDYLMINKGVFQELAKINAEAVQGLQPKISIWT--XXXXXXX 174
           G YLRTLLDALGGNY ALRDY+M++ G FQE+AKINAEAV+GLQPKI++WT         
Sbjct: 375 GVYLRTLLDALGGNYAALRDYMMVSGGTFQEIAKINAEAVRGLQPKITVWTNGGGGAEAL 434

Query: 175 XXXXXXXXSAMNQVGGVYKMLPPLFKTVHEQT 270
                   +AM ++ GVYKMLPPLF TVHEQT
Sbjct: 435 DGGGSGGSTAMKEISGVYKMLPPLFSTVHEQT 466


Top