BLASTX nr result

ID: Coptis25_contig00023543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023543
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155678.1| PREDICTED: leucine--tRNA ligase-like [Cucumi...    77   1e-12
ref|XP_004134980.1| PREDICTED: leucine--tRNA ligase-like [Cucumi...    77   1e-12
ref|XP_002264138.1| PREDICTED: leucyl-tRNA synthetase [Vitis vin...    75   6e-12
ref|XP_002872690.1| EMB2369 [Arabidopsis lyrata subsp. lyrata] g...    75   7e-12
ref|XP_002518434.1| leucyl-tRNA synthetase, putative [Ricinus co...    74   1e-11

>ref|XP_004155678.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus]
          Length = 1059

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 30/37 (81%), Positives = 36/37 (97%)
 Frame = +1

Query: 238 EEVRRAYPFHQIEPRWQRYWEDNTTFKTPDEVDTSKP 348
           +EVRRAYPFH+IEP+WQRYW++N TF+TPDEVDTSKP
Sbjct: 166 QEVRRAYPFHEIEPKWQRYWDENRTFRTPDEVDTSKP 202


>ref|XP_004134980.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus]
          Length = 978

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 30/37 (81%), Positives = 36/37 (97%)
 Frame = +1

Query: 238 EEVRRAYPFHQIEPRWQRYWEDNTTFKTPDEVDTSKP 348
           +EVRRAYPFH+IEP+WQRYW++N TF+TPDEVDTSKP
Sbjct: 85  QEVRRAYPFHEIEPKWQRYWDENRTFRTPDEVDTSKP 121


>ref|XP_002264138.1| PREDICTED: leucyl-tRNA synthetase [Vitis vinifera]
           gi|302144097|emb|CBI23202.3| unnamed protein product
           [Vitis vinifera]
          Length = 971

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = +1

Query: 238 EEVRRAYPFHQIEPRWQRYWEDNTTFKTPDEVDTSKP 348
           E +RRAYPFH+IEPRWQR+WE+N TF+TPD+VDTSKP
Sbjct: 77  EPIRRAYPFHEIEPRWQRFWEENRTFRTPDDVDTSKP 113


>ref|XP_002872690.1| EMB2369 [Arabidopsis lyrata subsp. lyrata]
           gi|297318527|gb|EFH48949.1| EMB2369 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 972

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +1

Query: 232 TNEEVRRAYPFHQIEPRWQRYWEDNTTFKTPDEVDTSKP 348
           T  E++R YPFH+IEP+WQRYWEDN TF+TPD+VDTSKP
Sbjct: 76  TTIELKRVYPFHEIEPKWQRYWEDNRTFRTPDDVDTSKP 114


>ref|XP_002518434.1| leucyl-tRNA synthetase, putative [Ricinus communis]
           gi|223542279|gb|EEF43821.1| leucyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 960

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 28/35 (80%), Positives = 34/35 (97%)
 Frame = +1

Query: 244 VRRAYPFHQIEPRWQRYWEDNTTFKTPDEVDTSKP 348
           V++AYPFH+IEP+WQRYWEDN TF+TPDE+DTSKP
Sbjct: 68  VKKAYPFHEIEPKWQRYWEDNHTFRTPDEIDTSKP 102


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