BLASTX nr result

ID: Coptis25_contig00023531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023531
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298123.1| pleiotropic drug resistance,  ABC transporte...    83   2e-14
ref|XP_004138743.1| PREDICTED: pleiotropic drug resistance prote...    81   1e-13
ref|XP_003546230.1| PREDICTED: pleiotropic drug resistance prote...    81   1e-13
ref|XP_003546219.1| PREDICTED: pleiotropic drug resistance prote...    81   1e-13
ref|XP_003546218.1| PREDICTED: pleiotropic drug resistance prote...    81   1e-13

>ref|XP_002298123.1| pleiotropic drug resistance,  ABC transporter family protein [Populus
            trichocarpa] gi|222845381|gb|EEE82928.1| pleiotropic drug
            resistance, ABC transporter family protein [Populus
            trichocarpa]
          Length = 1424

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = +2

Query: 17   FSAMGSIFTTVLFIGTQNASTVQPVVAM*QTVFYRERAAGMYSALPYVFAQ 169
            F+AMGS++T VLF+G QNA++VQPVVA+ +TVFYRERAAGMYSALPY FAQ
Sbjct: 1204 FNAMGSMYTAVLFLGVQNAASVQPVVAVERTVFYRERAAGMYSALPYAFAQ 1254


>ref|XP_004138743.1| PREDICTED: pleiotropic drug resistance protein 1-like [Cucumis
            sativus] gi|449499585|ref|XP_004160857.1| PREDICTED:
            pleiotropic drug resistance protein 1-like [Cucumis
            sativus]
          Length = 1421

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = +2

Query: 17   FSAMGSIFTTVLFIGTQNASTVQPVVAM*QTVFYRERAAGMYSALPYVFAQ 169
            F+A+GS++  VLFIGTQN+S+VQPVVA+ +TVFYRERAAGMYSALPY F Q
Sbjct: 1201 FNAIGSMYVAVLFIGTQNSSSVQPVVAIERTVFYRERAAGMYSALPYAFGQ 1251


>ref|XP_003546230.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1427

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = +2

Query: 8    GSKFSAMGSIFTTVLFIGTQNASTVQPVVAM*QTVFYRERAAGMYSALPYVFAQ 169
            G   +A+GS++T VLF+G QNAS+VQPVVA+ +TVFYRE+AAGMYSALPY FAQ
Sbjct: 1202 GDLLNAIGSMYTAVLFLGVQNASSVQPVVAIERTVFYREKAAGMYSALPYAFAQ 1255


>ref|XP_003546219.1| PREDICTED: pleiotropic drug resistance protein 1-like isoform 2
            [Glycine max]
          Length = 1417

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = +2

Query: 8    GSKFSAMGSIFTTVLFIGTQNASTVQPVVAM*QTVFYRERAAGMYSALPYVFAQ 169
            G   +A+GS++T VLF+G QNAS+VQPVVA+ +TVFYRE+AAGMYSALPY FAQ
Sbjct: 1192 GDLLNALGSMYTAVLFLGIQNASSVQPVVAVERTVFYREKAAGMYSALPYAFAQ 1245


>ref|XP_003546218.1| PREDICTED: pleiotropic drug resistance protein 1-like isoform 1
            [Glycine max]
          Length = 1426

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = +2

Query: 8    GSKFSAMGSIFTTVLFIGTQNASTVQPVVAM*QTVFYRERAAGMYSALPYVFAQ 169
            G   +A+GS++T VLF+G QNAS+VQPVVA+ +TVFYRE+AAGMYSALPY FAQ
Sbjct: 1201 GDLLNALGSMYTAVLFLGIQNASSVQPVVAVERTVFYREKAAGMYSALPYAFAQ 1254


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